Click here to switch to the map view.

The map label for this gene is 186477055

Identifier: 186477055

GI number: 186477055

Start: 2588428

End: 2589261

Strand: Direct

Name: 186477055

Synonym: Bphy_2304

Alternate gene names: NA

Gene position: 2588428-2589261 (Clockwise)

Preceding gene: 186477054

Following gene: 186477072

Centisome position: 74.4

GC content: 53.96

Gene sequence:

>834_bases
ATGAAAGACTCTGAAACGGCAGTGCTGATGCACGGAGTATCGCAACGACTAGCGTCCGAAGATGTTTTCGACGAAGCGGT
TGCTGAACTGCGTATCAATGGATACACGGTAATAGACAGCGGCCTCCCCGCCGGGCTGATTGAAAAACTCAAGTCGGGAA
TCGACCGGATCTATCAGACCCAGATTCACGAGCTTGGCGATGAGCAGGCACTCGCGAGCATCAACGACACAGACATCGCT
CGTTGTGTTCTCACTTATGACGCCGACTTTCTAACCGTGGCGACGGCGCCAAATCTGATGAAGCTTGCAACCAGGCTGTT
GGGAACAGAATTCGTGTTGATGCAACAGAATGGCATCATCAACCGACCTGACCGTCAAAACTATCAGGTGAAGTGGCATC
GTGACCTCAGCTATCAACACTGGACGAGTTCAAAAACGATCGCGTTCAATGCGTTGTTATGCGTAGATGAGTTCACCCTC
AAGAACGGCGCGTCCTTCGTTCTGCCTGCAACGCATCATATCGAGGCATTCCCCACCGATCGGTTTGTGCGCCAACATGA
AAGACAAATCGCGGCGCCAGCTGGATCGTTCATCGTGCTGGACGCGATGCTGTATCACCGGGGCGGAATTAATGTATCGA
ACGACGTTCGTCGGGCCGTCAATCACCTCATTGGCCTGCCGTTCCTCGCGCAACAAGTGAATTTCGAAACCGGATTCGCA
AGCACGGGTATGTCCGCACCCACCGATCCAAACGTGCGAAAGTATCTGGGCTTCCGCTGGTCACCTGCGGCGAATGCCAA
GGACTGGCGGAAACGCCGCATGCCCTCGCGATAA

Upstream 100 bases:

>100_bases
GACAAGACTTACTGTTTCTACAACGGTAACGGGTTCGGTCGCGACGGATTCGCAGTTGCAGAACTCATTGCCCCTTAGAT
TGCGCTCGCAATCCTCCGAC

Downstream 100 bases:

>100_bases
CTCCGCTCGCAAACCGTCCGCTCCTGGCGAGATGAGAGGCCGCGCGATGCGGCCTGATTAACCCGGACATCCCGCGCTAG
TTTGGGCTACGATCGATCGC

Product: phytanoyl-CoA dioxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MKDSETAVLMHGVSQRLASEDVFDEAVAELRINGYTVIDSGLPAGLIEKLKSGIDRIYQTQIHELGDEQALASINDTDIA
RCVLTYDADFLTVATAPNLMKLATRLLGTEFVLMQQNGIINRPDRQNYQVKWHRDLSYQHWTSSKTIAFNALLCVDEFTL
KNGASFVLPATHHIEAFPTDRFVRQHERQIAAPAGSFIVLDAMLYHRGGINVSNDVRRAVNHLIGLPFLAQQVNFETGFA
STGMSAPTDPNVRKYLGFRWSPAANAKDWRKRRMPSR

Sequences:

>Translated_277_residues
MKDSETAVLMHGVSQRLASEDVFDEAVAELRINGYTVIDSGLPAGLIEKLKSGIDRIYQTQIHELGDEQALASINDTDIA
RCVLTYDADFLTVATAPNLMKLATRLLGTEFVLMQQNGIINRPDRQNYQVKWHRDLSYQHWTSSKTIAFNALLCVDEFTL
KNGASFVLPATHHIEAFPTDRFVRQHERQIAAPAGSFIVLDAMLYHRGGINVSNDVRRAVNHLIGLPFLAQQVNFETGFA
STGMSAPTDPNVRKYLGFRWSPAANAKDWRKRRMPSR
>Mature_277_residues
MKDSETAVLMHGVSQRLASEDVFDEAVAELRINGYTVIDSGLPAGLIEKLKSGIDRIYQTQIHELGDEQALASINDTDIA
RCVLTYDADFLTVATAPNLMKLATRLLGTEFVLMQQNGIINRPDRQNYQVKWHRDLSYQHWTSSKTIAFNALLCVDEFTL
KNGASFVLPATHHIEAFPTDRFVRQHERQIAAPAGSFIVLDAMLYHRGGINVSNDVRRAVNHLIGLPFLAQQVNFETGFA
STGMSAPTDPNVRKYLGFRWSPAANAKDWRKRRMPSR

Specific function: Unknown

COG id: COG5285

COG function: function code Q; Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PhyH family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008775 [H]

Pfam domain/function: PF05721 PhyH [H]

EC number: NA

Molecular weight: Translated: 31088; Mature: 31088

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDSETAVLMHGVSQRLASEDVFDEAVAELRINGYTVIDSGLPAGLIEKLKSGIDRIYQT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEECCCCCHHHHHHHHHHHHHHHHH
QIHELGDEQALASINDTDIARCVLTYDADFLTVATAPNLMKLATRLLGTEFVLMQQNGII
HHHHCCCHHHHHCCCCHHHEEEEEEECCCEEEEECCCHHHHHHHHHHCCEEEEEECCCCC
NRPDRQNYQVKWHRDLSYQHWTSSKTIAFNALLCVDEFTLKNGASFVLPATHHIEAFPTD
CCCCCCCCEEEEEECCCEEECCCCCEEEEEEEEEHHHHHHCCCCEEEECCCCCCCCCCHH
RFVRQHERQIAAPAGSFIVLDAMLYHRGGINVSNDVRRAVNHLIGLPFLAQQVNFETGFA
HHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCC
STGMSAPTDPNVRKYLGFRWSPAANAKDWRKRRMPSR
CCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHCCCCC
>Mature Secondary Structure
MKDSETAVLMHGVSQRLASEDVFDEAVAELRINGYTVIDSGLPAGLIEKLKSGIDRIYQT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCEEEECCCCCHHHHHHHHHHHHHHHHH
QIHELGDEQALASINDTDIARCVLTYDADFLTVATAPNLMKLATRLLGTEFVLMQQNGII
HHHHCCCHHHHHCCCCHHHEEEEEEECCCEEEEECCCHHHHHHHHHHCCEEEEEECCCCC
NRPDRQNYQVKWHRDLSYQHWTSSKTIAFNALLCVDEFTLKNGASFVLPATHHIEAFPTD
CCCCCCCCEEEEEECCCEEECCCCCEEEEEEEEEHHHHHHCCCCEEEECCCCCCCCCCHH
RFVRQHERQIAAPAGSFIVLDAMLYHRGGINVSNDVRRAVNHLIGLPFLAQQVNFETGFA
HHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCC
STGMSAPTDPNVRKYLGFRWSPAANAKDWRKRRMPSR
CCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]