| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is apaH
Identifier: 186477072
GI number: 186477072
Start: 2605714
End: 2606562
Strand: Direct
Name: apaH
Synonym: Bphy_2321
Alternate gene names: 186477072
Gene position: 2605714-2606562 (Clockwise)
Preceding gene: 186477055
Following gene: 186477082
Centisome position: 74.89
GC content: 67.26
Gene sequence:
>849_bases ATGACTGCTTCCACCGCTTCCGCCCCCCTCGCCTTCGGCGATCTGCAGGGCTGCCGCACGCAATTCCAGCAACTGCTCGC AAAGGCCGCGCCGCCTGCCGACGCGCCACTCTGGTTCGCGGGCGACCTGATCAACCGCGGCGGCGAGTCGCTCGCGATGC TGCGCGACATCATCGCGCTCGGCGATCGCGCGGTGCCCGTGCTGGGCAATCACGATCTGCATCTGCTGTCCGTGTCGGCG GGAATCAGAAAGTCGAAGAAAGGCGACACGATCGATGAGATCCTCGCCGCGCCCGACGCAGACGATATGCTGCACTGGAT CCGCCACCGGCCGCTCGCCCACTACGAGAACGGCATGCTGCTCGTGCATGCGGGCGTGCTGCCGCAATGGGATGTCGATT TGACGCTGGAACTCGCCGACGAACTGCAGCGCGCGTTGCGCGCGCCTGGCTGGAAGGAAACGCTGGCGGGGCTGTACGGC AACGAGCCAAACCGCTGGAAGCCGGGCCTCAAGGGCATCGACCGGCTGCGCCTCACGTGCACGGCGCTCACACGGATGCG CTTCTGCAACGCCGACGGCGTGATGGATTTCTCGTCGAGCGGCGGCATCGGTTCAGCGCCCGCGGGCTTCATGCCGTGGT TCGACGTGCCGGGCCGCAAGACCGAGGAGATCACGGTCGTCTTCGGGCACTGGGCTGCCCTCGGCCTCCTGATCCGCGAC AATCTGATCGGGCTCGATTCGGGCTGCGTGTGGGGCGAGCAGCTGTCGGCCGTCCGGCTGGCTCAGTCGGCCGCCGAACG CACGGTCACGCAAGTCGAATGCGAAGGTTGCCGCGCCGACGTGCATTGA
Upstream 100 bases:
>100_bases ACGCAGTTAAGCTGCATGCGCATCGAATGTATGCCGGGCGAGTCATGACAGAGCGAGAACCGCTCGCCACTTCGCCCCTT CGAACCACCACTTCTTGCCG
Downstream 100 bases:
>100_bases GCGCGGCCGACACGCTACGCGTGGCGCGTCATGTCGACGCCCGAACCCGGCAACGGCTCTTGTGGGTTCGCTGAAGCGGC GTCGATAAACTGCTGCGTAC
Product: diadenosine tetraphosphatase
Products: NA
Alternate protein names: Ap4A hydrolase; Diadenosine 5',5'''-P1,P4-tetraphosphate pyrophosphohydrolase; Diadenosine tetraphosphatase
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MTASTASAPLAFGDLQGCRTQFQQLLAKAAPPADAPLWFAGDLINRGGESLAMLRDIIALGDRAVPVLGNHDLHLLSVSA GIRKSKKGDTIDEILAAPDADDMLHWIRHRPLAHYENGMLLVHAGVLPQWDVDLTLELADELQRALRAPGWKETLAGLYG NEPNRWKPGLKGIDRLRLTCTALTRMRFCNADGVMDFSSSGGIGSAPAGFMPWFDVPGRKTEEITVVFGHWAALGLLIRD NLIGLDSGCVWGEQLSAVRLAQSAAERTVTQVECEGCRADVH
Sequences:
>Translated_282_residues MTASTASAPLAFGDLQGCRTQFQQLLAKAAPPADAPLWFAGDLINRGGESLAMLRDIIALGDRAVPVLGNHDLHLLSVSA GIRKSKKGDTIDEILAAPDADDMLHWIRHRPLAHYENGMLLVHAGVLPQWDVDLTLELADELQRALRAPGWKETLAGLYG NEPNRWKPGLKGIDRLRLTCTALTRMRFCNADGVMDFSSSGGIGSAPAGFMPWFDVPGRKTEEITVVFGHWAALGLLIRD NLIGLDSGCVWGEQLSAVRLAQSAAERTVTQVECEGCRADVH >Mature_281_residues TASTASAPLAFGDLQGCRTQFQQLLAKAAPPADAPLWFAGDLINRGGESLAMLRDIIALGDRAVPVLGNHDLHLLSVSAG IRKSKKGDTIDEILAAPDADDMLHWIRHRPLAHYENGMLLVHAGVLPQWDVDLTLELADELQRALRAPGWKETLAGLYGN EPNRWKPGLKGIDRLRLTCTALTRMRFCNADGVMDFSSSGGIGSAPAGFMPWFDVPGRKTEEITVVFGHWAALGLLIRDN LIGLDSGCVWGEQLSAVRLAQSAAERTVTQVECEGCRADVH
Specific function: Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
COG id: COG0639
COG function: function code T; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Ap4A hydrolase family
Homologues:
Organism=Escherichia coli, GI1786234, Length=256, Percent_Identity=42.1875, Blast_Score=209, Evalue=1e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): APAH_BURP8 (B2JFC8)
Other databases:
- EMBL: CP001043 - RefSeq: YP_001858542.1 - ProteinModelPortal: B2JFC8 - SMR: B2JFC8 - GeneID: 6243807 - GenomeReviews: CP001043_GR - KEGG: bph:Bphy_2321 - HOGENOM: HBG724457 - OMA: LVFGHWA - ProtClustDB: PRK00166 - HAMAP: MF_00199 - InterPro: IPR004617 - InterPro: IPR004843 - PIRSF: PIRSF000903 - TIGRFAMs: TIGR00668
Pfam domain/function: PF00149 Metallophos
EC number: =3.6.1.41
Molecular weight: Translated: 30538; Mature: 30407
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASTASAPLAFGDLQGCRTQFQQLLAKAAPPADAPLWFAGDLINRGGESLAMLRDIIAL CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHCCCHHHHHHHHHHHH GDRAVPVLGNHDLHLLSVSAGIRKSKKGDTIDEILAAPDADDMLHWIRHRPLAHYENGML CCCCEEEECCCCEEEEEECCCCCCCCCCCCHHHHHCCCCHHHHHHHHHCCCCCCCCCCEE LVHAGVLPQWDVDLTLELADELQRALRAPGWKETLAGLYGNEPNRWKPGLKGIDRLRLTC EEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH TALTRMRFCNADGVMDFSSSGGIGSAPAGFMPWFDVPGRKTEEITVVFGHWAALGLLIRD HHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHC NLIGLDSGCVWGEQLSAVRLAQSAAERTVTQVECEGCRADVH CEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TASTASAPLAFGDLQGCRTQFQQLLAKAAPPADAPLWFAGDLINRGGESLAMLRDIIAL CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHCCCHHHHHHHHHHHH GDRAVPVLGNHDLHLLSVSAGIRKSKKGDTIDEILAAPDADDMLHWIRHRPLAHYENGML CCCCEEEECCCCEEEEEECCCCCCCCCCCCHHHHHCCCCHHHHHHHHHCCCCCCCCCCEE LVHAGVLPQWDVDLTLELADELQRALRAPGWKETLAGLYGNEPNRWKPGLKGIDRLRLTC EEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH TALTRMRFCNADGVMDFSSSGGIGSAPAGFMPWFDVPGRKTEEITVVFGHWAALGLLIRD HHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHC NLIGLDSGCVWGEQLSAVRLAQSAAERTVTQVECEGCRADVH CEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA