| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is tagO [H]
Identifier: 186477041
GI number: 186477041
Start: 2569410
End: 2570438
Strand: Reverse
Name: tagO [H]
Synonym: Bphy_2290
Alternate gene names: 186477041
Gene position: 2570438-2569410 (Counterclockwise)
Preceding gene: 186477042
Following gene: 186477040
Centisome position: 73.88
GC content: 66.47
Gene sequence:
>1029_bases ATGCAGATGCAAGATTCACTGATGTCTCCGTGGACTCTATCCCTCGTCGCGGGCGTGGCCGTCTGTGCCTGCGCGGCGAT CCTGTACCTGCTGCTGAAGACAGGTCTCGCCTGGCGCCTCGCGACCGATATCCCGAACGACCGCTCGCTCCACGTGCGGC CGACGCCGCGCGTCGGCGGCTGGGGCATCGTGCCCGTCGCGGTCGTCGCGATGCTGCTGATCGCGCCGTCGCTGTGGTTC GTCGGGCTGGCGACGGCGTTTCTCGCCGCCGTATCGCAGGTTGACGACCGGCGCGGCTTGCCCGCGCGCGTGCGTTTCGC CGCGCATCTGATCGCCGTCGTCGCGTTCGTCGCACTGTTTCCGGCTGCGGCGCCGTGGTGGGTGCTGGTCGTGCTGGCAT TTTTGATGATCTGGCTGGTCAATCTCTACAATTTCATGGACGGCGCCGACGGCCTCGCGGGCGGCATGGCGCTGTTCGGC TTCGCGGGCTACGCGGCGGCGGCGCTGCTCTCCGATCATCCGATGCCGGAACTGGCACTTGCGTCGCTGGCGATTGCGGG CGCCGCGCTCGGTTTCCTGTTCTTCAATTTTCATCCGGCGCGGATTTTTCTCGGCGACGCAGGCTCGATCTCGCTCGGTT ATCTGGCGGGCGCGCTCGGCTACTGGGGCTGGCGCGGCGGCGCATGGCCCGTGTGGTTCCCGGCGCTCGTGTTCTCGCCG TTTATCGCCGACGCGTCGGTGACCCTCGCGCGGCGCCTTGCGCGCGGTGAAAAGTTTTGGCAAGCGCACCGCGAGCACTA CTATCAACGCATGGTGCGTTCCGGCGTCGGTCATGCCGGAACCGCATGGGTGTGGTATGCAGTGATGGTCGCCGGCATCG CCCTTGCTTTATTCGCGCTCGGCCGTTCTACGGCCACTCAGTGGGGCATCGTCGCGGGATGGGCCGGCGTGCTGGTCGTC GTCGGAAGCATCGTCGATCTGCGCTGGCGCCGTTTCCAGTCCACACTGTGCAAACAATCCGAGGTATGA
Upstream 100 bases:
>100_bases TCGCACATACGCGACGTCCTCGGCTGGCAACCGCCGTTCTCAACCGACGAAGGTCTGGCAGCAACCGCCGACTGGTATCG TTCGACTCACTGAACCGTTC
Downstream 100 bases:
>100_bases CGCTGATGCTCAGATCCAAAGCCAGCTGGCTATCCTTCAGCGCTTTTCTGTTCGACCTGGCTGCCGTCGCCGGCACGTGG CTCATCGCCTACGTGATCCG
Product: glycosyl transferase family protein
Products: Undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine; UMP [C]
Alternate protein names: UDP-GlcNAc:undecaprenyl-phosphate GlcNAc-1-phosphate transferase; Undecaprenyl-Phosphate GlcNAc-1-phosphate transferase [H]
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MQMQDSLMSPWTLSLVAGVAVCACAAILYLLLKTGLAWRLATDIPNDRSLHVRPTPRVGGWGIVPVAVVAMLLIAPSLWF VGLATAFLAAVSQVDDRRGLPARVRFAAHLIAVVAFVALFPAAAPWWVLVVLAFLMIWLVNLYNFMDGADGLAGGMALFG FAGYAAAALLSDHPMPELALASLAIAGAALGFLFFNFHPARIFLGDAGSISLGYLAGALGYWGWRGGAWPVWFPALVFSP FIADASVTLARRLARGEKFWQAHREHYYQRMVRSGVGHAGTAWVWYAVMVAGIALALFALGRSTATQWGIVAGWAGVLVV VGSIVDLRWRRFQSTLCKQSEV
Sequences:
>Translated_342_residues MQMQDSLMSPWTLSLVAGVAVCACAAILYLLLKTGLAWRLATDIPNDRSLHVRPTPRVGGWGIVPVAVVAMLLIAPSLWF VGLATAFLAAVSQVDDRRGLPARVRFAAHLIAVVAFVALFPAAAPWWVLVVLAFLMIWLVNLYNFMDGADGLAGGMALFG FAGYAAAALLSDHPMPELALASLAIAGAALGFLFFNFHPARIFLGDAGSISLGYLAGALGYWGWRGGAWPVWFPALVFSP FIADASVTLARRLARGEKFWQAHREHYYQRMVRSGVGHAGTAWVWYAVMVAGIALALFALGRSTATQWGIVAGWAGVLVV VGSIVDLRWRRFQSTLCKQSEV >Mature_342_residues MQMQDSLMSPWTLSLVAGVAVCACAAILYLLLKTGLAWRLATDIPNDRSLHVRPTPRVGGWGIVPVAVVAMLLIAPSLWF VGLATAFLAAVSQVDDRRGLPARVRFAAHLIAVVAFVALFPAAAPWWVLVVLAFLMIWLVNLYNFMDGADGLAGGMALFG FAGYAAAALLSDHPMPELALASLAIAGAALGFLFFNFHPARIFLGDAGSISLGYLAGALGYWGWRGGAWPVWFPALVFSP FIADASVTLARRLARGEKFWQAHREHYYQRMVRSGVGHAGTAWVWYAVMVAGIALALFALGRSTATQWGIVAGWAGVLVV VGSIVDLRWRRFQSTLCKQSEV
Specific function: Catalyzes the formation of undecaprenyl-PP-N- acetylglucosamine. Involved in the synthesis of anionic cell-wall polymers as it mediates the initiation of the linkage unit formation that appears to be common to the two types of teichoic acids attached to t
COG id: COG0472
COG function: function code M; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 4 family [H]
Homologues:
Organism=Escherichia coli, GI1786275, Length=216, Percent_Identity=32.8703703703704, Blast_Score=62, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000715 - InterPro: IPR018480 [H]
Pfam domain/function: PF00953 Glycos_transf_4 [H]
EC number: 2.7.8.13 [C]
Molecular weight: Translated: 36844; Mature: 36844
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQMQDSLMSPWTLSLVAGVAVCACAAILYLLLKTGLAWRLATDIPNDRSLHVRPTPRVGG CCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCCCEEEECCCCCCCC WGIVPVAVVAMLLIAPSLWFVGLATAFLAAVSQVDDRRGLPARVRFAAHLIAVVAFVALF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH PAAAPWWVLVVLAFLMIWLVNLYNFMDGADGLAGGMALFGFAGYAAAALLSDHPMPELAL HCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH ASLAIAGAALGFLFFNFHPARIFLGDAGSISLGYLAGALGYWGWRGGAWPVWFPALVFSP HHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH FIADASVTLARRLARGEKFWQAHREHYYQRMVRSGVGHAGTAWVWYAVMVAGIALALFAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH GRSTATQWGIVAGWAGVLVVVGSIVDLRWRRFQSTLCKQSEV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQMQDSLMSPWTLSLVAGVAVCACAAILYLLLKTGLAWRLATDIPNDRSLHVRPTPRVGG CCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCCCEEEECCCCCCCC WGIVPVAVVAMLLIAPSLWFVGLATAFLAAVSQVDDRRGLPARVRFAAHLIAVVAFVALF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH PAAAPWWVLVVLAFLMIWLVNLYNFMDGADGLAGGMALFGFAGYAAAALLSDHPMPELAL HCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH ASLAIAGAALGFLFFNFHPARIFLGDAGSISLGYLAGALGYWGWRGGAWPVWFPALVFSP HHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH FIADASVTLARRLARGEKFWQAHREHYYQRMVRSGVGHAGTAWVWYAVMVAGIALALFAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH GRSTATQWGIVAGWAGVLVVVGSIVDLRWRRFQSTLCKQSEV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Undecaprenyl phosphate; UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine [C]
Specific reaction: Undecaprenyl phosphate + UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine --> Undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine + UMP [C]
General reaction: Substituted phospho group transfer [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12101296; 9384377 [H]