Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

Click here to switch to the map view.

The map label for this gene is galE [H]

Identifier: 186477042

GI number: 186477042

Start: 2570446

End: 2571402

Strand: Reverse

Name: galE [H]

Synonym: Bphy_2291

Alternate gene names: 186477042

Gene position: 2571402-2570446 (Counterclockwise)

Preceding gene: 186477043

Following gene: 186477041

Centisome position: 73.91

GC content: 67.61

Gene sequence:

>957_bases
ATGAGTCATGTGGTCGTGAGCGGGGCGAATGGGTTCGTCGGACGCGCGCTGTGCTGCGCGCTGCTCGACGCCGGTCATCG
CGTGACGGGACTCGTGCGGCGTTCGGGCGCATGCGTAAACGGCGTGGCGGAGTGGGTCGACGAGAGCACGGACTACAGCG
GCATTGGGCAGTCTTGGCCTGCCGGCCTGACTGCCGACTGCATCGTGCATTTGGCTGCACGCGTGCATGTGATGCACGAC
ACCGCAGCCGACCCTGACGCCGCGTTCCGTGCCACCAATGTCGACGGCACGCTGCGGCTCGCCGCGGCCGCACGGGAGCA
CGGCGTGCCGCGTTTCGTGTTCGTCAGCAGCATCAAGGCGGTCGCAGAAAGCGACAACGGCAAGCCCTTGCGCGAAAACG
ATCCGCCGCGTATTGAAGATCCGTATGGCCGCTCGAAGCGCGCCGCCGAAGAAGGCCTCCTGCGACTCGGCGAAGCAACG
GGCCTCGAGATAGTCATCGTCCGTCCGCCGCTCGTCTACGGGCCGCAAGTGCGCGCTAACTTCCTGCGTCTGATGGATGC
AGTCTGGCGTGGCGTGCCGCTGCCGCTCAGCGGCGCTGACGCGCGGCGCAGCATGGTGTACGTGGGCAACCTGGCGGACG
CGCTGATGTGTTGCGCGACCGATCCGCGCGCGGCGCACCAGTGCTTTCACGTCGCGGACAGTACCGCGCCGACCGTCGCG
GAACTGGTGCGCGCGCTCGGGCGGCATCTAGGCAAGCCTGCGCGTCTGCTGCCGGTACCGGCTGGCTGGCTGCGCGCGGC
GGGGCGATTGACGGGCCGTTCCGCGCAAGTTGACCGTCTGATCGGCGGTCTGCAGCTCGATACGTCGCACATACGCGACG
TCCTCGGCTGGCAACCGCCGTTCTCAACCGACGAAGGTCTGGCAGCAACCGCCGACTGGTATCGTTCGACTCACTGA

Upstream 100 bases:

>100_bases
TGCATCACGGCGGCGGCGCGGCGCGCAAAGGCTCGGCGCATATCCGGATGTTCGTGGCGTCGGCGTTCCGGTTCTTCAAC
CGTTTCGGCTGGAAGTGGCT

Downstream 100 bases:

>100_bases
ACCGTTCATGCAGATGCAAGATTCACTGATGTCTCCGTGGACTCTATCCCTCGTCGCGGGCGTGGCCGTCTGTGCCTGCG
CGGCGATCCTGTACCTGCTG

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MSHVVVSGANGFVGRALCCALLDAGHRVTGLVRRSGACVNGVAEWVDESTDYSGIGQSWPAGLTADCIVHLAARVHVMHD
TAADPDAAFRATNVDGTLRLAAAAREHGVPRFVFVSSIKAVAESDNGKPLRENDPPRIEDPYGRSKRAAEEGLLRLGEAT
GLEIVIVRPPLVYGPQVRANFLRLMDAVWRGVPLPLSGADARRSMVYVGNLADALMCCATDPRAAHQCFHVADSTAPTVA
ELVRALGRHLGKPARLLPVPAGWLRAAGRLTGRSAQVDRLIGGLQLDTSHIRDVLGWQPPFSTDEGLAATADWYRSTH

Sequences:

>Translated_318_residues
MSHVVVSGANGFVGRALCCALLDAGHRVTGLVRRSGACVNGVAEWVDESTDYSGIGQSWPAGLTADCIVHLAARVHVMHD
TAADPDAAFRATNVDGTLRLAAAAREHGVPRFVFVSSIKAVAESDNGKPLRENDPPRIEDPYGRSKRAAEEGLLRLGEAT
GLEIVIVRPPLVYGPQVRANFLRLMDAVWRGVPLPLSGADARRSMVYVGNLADALMCCATDPRAAHQCFHVADSTAPTVA
ELVRALGRHLGKPARLLPVPAGWLRAAGRLTGRSAQVDRLIGGLQLDTSHIRDVLGWQPPFSTDEGLAATADWYRSTH
>Mature_317_residues
SHVVVSGANGFVGRALCCALLDAGHRVTGLVRRSGACVNGVAEWVDESTDYSGIGQSWPAGLTADCIVHLAARVHVMHDT
AADPDAAFRATNVDGTLRLAAAAREHGVPRFVFVSSIKAVAESDNGKPLRENDPPRIEDPYGRSKRAAEEGLLRLGEATG
LEIVIVRPPLVYGPQVRANFLRLMDAVWRGVPLPLSGADARRSMVYVGNLADALMCCATDPRAAHQCFHVADSTAPTVAE
LVRALGRHLGKPARLLPVPAGWLRAAGRLTGRSAQVDRLIGGLQLDTSHIRDVLGWQPPFSTDEGLAATADWYRSTH

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081792, Length=247, Percent_Identity=28.3400809716599, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 33952; Mature: 33821

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHVVVSGANGFVGRALCCALLDAGHRVTGLVRRSGACVNGVAEWVDESTDYSGIGQSWP
CCEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCC
AGLTADCIVHLAARVHVMHDTAADPDAAFRATNVDGTLRLAAAAREHGVPRFVFVSSIKA
CCCHHHHHHHHHHHHHEEECCCCCCCHHEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHH
VAESDNGKPLRENDPPRIEDPYGRSKRAAEEGLLRLGEATGLEIVIVRPPLVYGPQVRAN
HHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHH
FLRLMDAVWRGVPLPLSGADARRSMVYVGNLADALMCCATDPRAAHQCFHVADSTAPTVA
HHHHHHHHHCCCCCCCCCCCHHCCEEEECCHHHHHHHHCCCHHHHHHHHHHCCCCCHHHH
ELVRALGRHLGKPARLLPVPAGWLRAAGRLTGRSAQVDRLIGGLQLDTSHIRDVLGWQPP
HHHHHHHHHCCCCCEEEECCHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHCCCCC
FSTDEGLAATADWYRSTH
CCCCCCCCHHHHHHHCCC
>Mature Secondary Structure 
SHVVVSGANGFVGRALCCALLDAGHRVTGLVRRSGACVNGVAEWVDESTDYSGIGQSWP
CEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCC
AGLTADCIVHLAARVHVMHDTAADPDAAFRATNVDGTLRLAAAAREHGVPRFVFVSSIKA
CCCHHHHHHHHHHHHHEEECCCCCCCHHEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHH
VAESDNGKPLRENDPPRIEDPYGRSKRAAEEGLLRLGEATGLEIVIVRPPLVYGPQVRAN
HHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHH
FLRLMDAVWRGVPLPLSGADARRSMVYVGNLADALMCCATDPRAAHQCFHVADSTAPTVA
HHHHHHHHHCCCCCCCCCCCHHCCEEEECCHHHHHHHHCCCHHHHHHHHHHCCCCCHHHH
ELVRALGRHLGKPARLLPVPAGWLRAAGRLTGRSAQVDRLIGGLQLDTSHIRDVLGWQPP
HHHHHHHHHCCCCCEEEECCHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHCCCCC
FSTDEGLAATADWYRSTH
CCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8820651; 10521656 [H]