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The map label for this gene is yibD [C]

Identifier: 186477035

GI number: 186477035

Start: 2561118

End: 2562122

Strand: Direct

Name: yibD [C]

Synonym: Bphy_2284

Alternate gene names: 186477035

Gene position: 2561118-2562122 (Clockwise)

Preceding gene: 186477034

Following gene: 186477036

Centisome position: 73.61

GC content: 60.2

Gene sequence:

>1005_bases
ATGAATCAGGTAACCGTCGTCATATGCAACTATAACTACGCACGCTTCCTCGGTGCGGCGATAGATTCAGCGCTGGCGCA
GGACTACCCACACGTTCGCGTGCTGGTCATCGACGACGGATCCACCGATGGCTCACGCCGCGTCATCGAGAGCTACGGCT
CGCGCATCGCGGCCGTCTTCAAGAGTAACGGAGGCCAGGGGTCTGCGTACAACTGCGCCATCTCCCTGCTGGAGTCCGGC
TACGCTGTGATGCTCGATGCCGACGATGTTCTGTACCCAACAGCGGTATCGCGAGCCGTGGAAGTCATGGATCGAGGCTA
CGCGAAGGCACAGTTTCGCCTTGATGTAATGGACGGCGCGGGACGGCACACAGGCACGCACGTGCCGCACTCCGATCCCC
CTGAAACATGTGGCGATCTGCTTGCCCAAGGCTGGCTCTACCCCTCTCCGCCGGCATCCGGCCACGTGTACCAGGTCAGC
GCACTGAAGCGCATATTCCCGGTGCCTGACACGAAGTTCAACCGGTACGGCGCAGACTTCTACGCGATCTACGGCGTAGC
GCTACAGGGCCGGGTCGCAAGCATCCCCTGTTCGCTGGGTGGCTACCGTATCCACCAGAACAGCGCGAGCGATGCGAGCT
TCGCCAATTCAGAGGACTACGGGGAGGTCTCGCAAGCGTTCGATGAGCGCTGGTCCATGCTCCGACAGATTGCGGCAAAG
CGGATTGGCGTGGTGCTGCCGTCTACATGTCACGATTTCGCCATCGAAAAAGCGAGGTTCTGTTCGTGCGTCTACCATGC
CCCGCTCGCGAGCCGCTGGCACTGGCTTTTGAAAGAGTCCGGGAATTATTTGCACACGGTCATTGCAAATCCCTTCTGGG
GTCTGCGCAAGAAAATGGGCACCCTGGTCCTTTCAAGTCTTTGCCTGCTGCCCTTTCCGTCCGTCTCTGATTTCGCCGTG
CGTTACATAGTGAATCCCGCCTCGCGCAGGCGACGCGCGGCGTGA

Upstream 100 bases:

>100_bases
GCCGTGTGGCGCACGCCCCCGGCTGCAGGAGACTCGTTACCGCATTTCACGTGTGGTGCGGCTTTATGTGGACGTTTCCT
TCCTTTAAGGCACGAGAGCG

Downstream 100 bases:

>100_bases
TGTGTCAACGCCTGCGTACGCCCGGCTCGCAGGCCGACCTCGCCGCGTTCAATGGCCGCCTTTGCCGGGCGGCGTTCAGT
AGCGCGAAATTGCATTTCTT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MNQVTVVICNYNYARFLGAAIDSALAQDYPHVRVLVIDDGSTDGSRRVIESYGSRIAAVFKSNGGQGSAYNCAISLLESG
YAVMLDADDVLYPTAVSRAVEVMDRGYAKAQFRLDVMDGAGRHTGTHVPHSDPPETCGDLLAQGWLYPSPPASGHVYQVS
ALKRIFPVPDTKFNRYGADFYAIYGVALQGRVASIPCSLGGYRIHQNSASDASFANSEDYGEVSQAFDERWSMLRQIAAK
RIGVVLPSTCHDFAIEKARFCSCVYHAPLASRWHWLLKESGNYLHTVIANPFWGLRKKMGTLVLSSLCLLPFPSVSDFAV
RYIVNPASRRRRAA

Sequences:

>Translated_334_residues
MNQVTVVICNYNYARFLGAAIDSALAQDYPHVRVLVIDDGSTDGSRRVIESYGSRIAAVFKSNGGQGSAYNCAISLLESG
YAVMLDADDVLYPTAVSRAVEVMDRGYAKAQFRLDVMDGAGRHTGTHVPHSDPPETCGDLLAQGWLYPSPPASGHVYQVS
ALKRIFPVPDTKFNRYGADFYAIYGVALQGRVASIPCSLGGYRIHQNSASDASFANSEDYGEVSQAFDERWSMLRQIAAK
RIGVVLPSTCHDFAIEKARFCSCVYHAPLASRWHWLLKESGNYLHTVIANPFWGLRKKMGTLVLSSLCLLPFPSVSDFAV
RYIVNPASRRRRAA
>Mature_334_residues
MNQVTVVICNYNYARFLGAAIDSALAQDYPHVRVLVIDDGSTDGSRRVIESYGSRIAAVFKSNGGQGSAYNCAISLLESG
YAVMLDADDVLYPTAVSRAVEVMDRGYAKAQFRLDVMDGAGRHTGTHVPHSDPPETCGDLLAQGWLYPSPPASGHVYQVS
ALKRIFPVPDTKFNRYGADFYAIYGVALQGRVASIPCSLGGYRIHQNSASDASFANSEDYGEVSQAFDERWSMLRQIAAK
RIGVVLPSTCHDFAIEKARFCSCVYHAPLASRWHWLLKESGNYLHTVIANPFWGLRKKMGTLVLSSLCLLPFPSVSDFAV
RYIVNPASRRRRAA

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 36689; Mature: 36689

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQVTVVICNYNYARFLGAAIDSALAQDYPHVRVLVIDDGSTDGSRRVIESYGSRIAAVF
CCCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHCCCEEEEE
KSNGGQGSAYNCAISLLESGYAVMLDADDVLYPTAVSRAVEVMDRGYAKAQFRLDVMDGA
ECCCCCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCC
GRHTGTHVPHSDPPETCGDLLAQGWLYPSPPASGHVYQVSALKRIFPVPDTKFNRYGADF
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHCCCCCCCCCCCCCCE
YAIYGVALQGRVASIPCSLGGYRIHQNSASDASFANSEDYGEVSQAFDERWSMLRQIAAK
EEEEEHHCCCEEEECCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RIGVVLPSTCHDFAIEKARFCSCVYHAPLASRWHWLLKESGNYLHTVIANPFWGLRKKMG
HCCEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHH
TLVLSSLCLLPFPSVSDFAVRYIVNPASRRRRAA
HHHHHHHHHCCCCCHHHHHHHEEECCHHHHCCCC
>Mature Secondary Structure
MNQVTVVICNYNYARFLGAAIDSALAQDYPHVRVLVIDDGSTDGSRRVIESYGSRIAAVF
CCCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHCCCEEEEE
KSNGGQGSAYNCAISLLESGYAVMLDADDVLYPTAVSRAVEVMDRGYAKAQFRLDVMDGA
ECCCCCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCC
GRHTGTHVPHSDPPETCGDLLAQGWLYPSPPASGHVYQVSALKRIFPVPDTKFNRYGADF
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHCCCCCCCCCCCCCCE
YAIYGVALQGRVASIPCSLGGYRIHQNSASDASFANSEDYGEVSQAFDERWSMLRQIAAK
EEEEEHHCCCEEEECCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
RIGVVLPSTCHDFAIEKARFCSCVYHAPLASRWHWLLKESGNYLHTVIANPFWGLRKKMG
HCCEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHH
TLVLSSLCLLPFPSVSDFAVRYIVNPASRRRRAA
HHHHHHHHHCCCCCHHHHHHHEEECCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840; 2111805 [H]