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The map label for this gene is ureF

Identifier: 186477013

GI number: 186477013

Start: 2535199

End: 2535879

Strand: Direct

Name: ureF

Synonym: Bphy_2262

Alternate gene names: 186477013

Gene position: 2535199-2535879 (Clockwise)

Preceding gene: 186477012

Following gene: 186477014

Centisome position: 72.87

GC content: 65.2

Gene sequence:

>681_bases
ATGCGCATCGCTGAACTGACCGCCCTGCTGCATCTTGCGTCGCCGGCGCTGCCGATCGGCGCGTTCAGCTATTCGCAAGG
GCTCGAAGCCGCCATCGAAGCGCAGTTCATCACCGACGCCGATACCGCGTGCGCGTGGATTCGAAGCGGCCTCTCGAACG
TGCTTGCGCATGGCGAGCTGCCGTTTCTCGCGCATCAGATCGAACGCTGGCGCACGCATGATGCCGCTGCATTGATCGAA
GGCAACCGCGAATTTCTTGCAAGCCGCGAATCGGCGGAACTGCGGCGCGAGACGGAACAGATGGGATGGTCGTTACGGCA
GTTGTGCGCATCGCTCGAATGGGGCGACGCTGCACGGCGCGCGACGCTTGCATCGATGGCGCCCATTGCGCAGCCGACGG
CTTTCGCGTTCGCCGCAATCGCGCACGACGCCGCCACCGATGCCGCGCTCGCCGCTTATGCATTCAGCTGGGTCGAAAAC
CAGGCGGCGGCCGCTTTGAAGGCCGTGCCGCTCGGACAGCTCGCGGGACAGCGCATCATTGTCGCGCTGCGCGAGCCGAT
CGACGCGGCCGTCAGGCAGGCGCTCAGCACGTCACCCGACGATATCAATACCTTCGCGCCGCAGCTGGGCATATTGTCGG
CGCGGCACGAGTCGCAGTATTCGCGGCTTTTCCGCTCCTAG

Upstream 100 bases:

>100_bases
CATGACCATGACCATGACCATGACCATGACCATGACCATGACCACGACCACGACGGTTGCGGTTCGTCGTGTGGTCATGA
TCATGGCCACGGCCATCGAC

Downstream 100 bases:

>100_bases
CCTTTGTTTTTCTTTTGATCGAATCATGAACGCACCTCATACGATGCATCGCACGAAGAAACTGCCGCCGCTGCGGGTGG
GCGTCGGCGGACCGGTCGGC

Product: urease accessory protein UreF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MRIAELTALLHLASPALPIGAFSYSQGLEAAIEAQFITDADTACAWIRSGLSNVLAHGELPFLAHQIERWRTHDAAALIE
GNREFLASRESAELRRETEQMGWSLRQLCASLEWGDAARRATLASMAPIAQPTAFAFAAIAHDAATDAALAAYAFSWVEN
QAAAALKAVPLGQLAGQRIIVALREPIDAAVRQALSTSPDDINTFAPQLGILSARHESQYSRLFRS

Sequences:

>Translated_226_residues
MRIAELTALLHLASPALPIGAFSYSQGLEAAIEAQFITDADTACAWIRSGLSNVLAHGELPFLAHQIERWRTHDAAALIE
GNREFLASRESAELRRETEQMGWSLRQLCASLEWGDAARRATLASMAPIAQPTAFAFAAIAHDAATDAALAAYAFSWVEN
QAAAALKAVPLGQLAGQRIIVALREPIDAAVRQALSTSPDDINTFAPQLGILSARHESQYSRLFRS
>Mature_226_residues
MRIAELTALLHLASPALPIGAFSYSQGLEAAIEAQFITDADTACAWIRSGLSNVLAHGELPFLAHQIERWRTHDAAALIE
GNREFLASRESAELRRETEQMGWSLRQLCASLEWGDAARRATLASMAPIAQPTAFAFAAIAHDAATDAALAAYAFSWVEN
QAAAALKAVPLGQLAGQRIIVALREPIDAAVRQALSTSPDDINTFAPQLGILSARHESQYSRLFRS

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter

COG id: COG0830

COG function: function code O; Urease accessory protein UreF

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureF family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): UREF_BURP8 (B2JF69)

Other databases:

- EMBL:   CP001043
- RefSeq:   YP_001858483.1
- GeneID:   6243748
- GenomeReviews:   CP001043_GR
- KEGG:   bph:Bphy_2262
- HOGENOM:   HBG709295
- OMA:   SPQLPIG
- ProtClustDB:   CLSK897184
- GO:   GO:0005737
- HAMAP:   MF_01385
- InterPro:   IPR002639
- PIRSF:   PIRSF009467

Pfam domain/function: PF01730 UreF

EC number: NA

Molecular weight: Translated: 24377; Mature: 24377

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIAELTALLHLASPALPIGAFSYSQGLEAAIEAQFITDADTACAWIRSGLSNVLAHGEL
CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC
PFLAHQIERWRTHDAAALIEGNREFLASRESAELRRETEQMGWSLRQLCASLEWGDAARR
HHHHHHHHHHHCCCHHHHHCCCHHHHHCCHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHH
ATLASMAPIAQPTAFAFAAIAHDAATDAALAAYAFSWVENQAAAALKAVPLGQLAGQRII
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHH
VALREPIDAAVRQALSTSPDDINTFAPQLGILSARHESQYSRLFRS
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRIAELTALLHLASPALPIGAFSYSQGLEAAIEAQFITDADTACAWIRSGLSNVLAHGEL
CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC
PFLAHQIERWRTHDAAALIEGNREFLASRESAELRRETEQMGWSLRQLCASLEWGDAARR
HHHHHHHHHHHCCCHHHHHCCCHHHHHCCHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHH
ATLASMAPIAQPTAFAFAAIAHDAATDAALAAYAFSWVENQAAAALKAVPLGQLAGQRII
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHH
VALREPIDAAVRQALSTSPDDINTFAPQLGILSARHESQYSRLFRS
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA