| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is ureE [H]
Identifier: 186477012
GI number: 186477012
Start: 2534526
End: 2535212
Strand: Direct
Name: ureE [H]
Synonym: Bphy_2261
Alternate gene names: 186477012
Gene position: 2534526-2535212 (Clockwise)
Preceding gene: 186477011
Following gene: 186477013
Centisome position: 72.85
GC content: 61.28
Gene sequence:
>687_bases ATGCGAACGATCGACAAGCTGTTGGGCGCACATATCAAACTTGCGCCCGTTTTGATCCAACGTGCACCGACGCTCACACT CGCGTTTGATGCACGCTGCAAGAGCCGTCTTGCCGTCACACTCGACAACGGCGAAGAGGTCGCGCTCGTGCTGCCGCGCG GCACGGTGTTGCGCGACGGCGATGTGCTCGTTGCCGGCGATGGCGCGCTGGTCCGCGTGGTCGCGGCGCCTGAATCGGTG CTGTATGTGCGTGCGCCCGATGCGCTCACGCTGACACGGGCCGCGTATCACCTCGGCAACCGGCACACGCCCGTCGAAGT CGGCGCAGATTATCTGAAGCTCGAATACGATCCTGTGCTCGCCGATATGCTCAAGCGCCTCGGCGCTTGCGTCGATCATG TCGACATGCCGTTCCAGCCGGAAACGGGCGCGTATGGCGGCGGTCACCGGCATGGTCACGACGAGACATTTGCCGAAGAC TATGCGCTCGCACAGCAGGTGTATGGCGAGCATCATGCGCATGCTCATCCGCATTCACATGAGCATGAGCATGAGCATTC GCACGATCACGCTCATGACCATGACCATGACCATGACCATGACCATGACCATGACCACGACCACGACGGTTGCGGTTCGT CGTGTGGTCATGATCATGGCCACGGCCATCGACATGCGCATCGCTGA
Upstream 100 bases:
>100_bases GTCGATCCCGAGACGTATCAGGTGATCGCCGATGGACAGTTGCTGACCTGCGAGCCGGCCAAAGTCCTGCCGATGGCGCA ACGCTATTTCCTGTTCTGAC
Downstream 100 bases:
>100_bases ACTGACCGCCCTGCTGCATCTTGCGTCGCCGGCGCTGCCGATCGGCGCGTTCAGCTATTCGCAAGGGCTCGAAGCCGCCA TCGAAGCGCAGTTCATCACC
Product: urease accessory protein UreE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MRTIDKLLGAHIKLAPVLIQRAPTLTLAFDARCKSRLAVTLDNGEEVALVLPRGTVLRDGDVLVAGDGALVRVVAAPESV LYVRAPDALTLTRAAYHLGNRHTPVEVGADYLKLEYDPVLADMLKRLGACVDHVDMPFQPETGAYGGGHRHGHDETFAED YALAQQVYGEHHAHAHPHSHEHEHEHSHDHAHDHDHDHDHDHDHDHDHDGCGSSCGHDHGHGHRHAHR
Sequences:
>Translated_228_residues MRTIDKLLGAHIKLAPVLIQRAPTLTLAFDARCKSRLAVTLDNGEEVALVLPRGTVLRDGDVLVAGDGALVRVVAAPESV LYVRAPDALTLTRAAYHLGNRHTPVEVGADYLKLEYDPVLADMLKRLGACVDHVDMPFQPETGAYGGGHRHGHDETFAED YALAQQVYGEHHAHAHPHSHEHEHEHSHDHAHDHDHDHDHDHDHDHDHDGCGSSCGHDHGHGHRHAHR >Mature_228_residues MRTIDKLLGAHIKLAPVLIQRAPTLTLAFDARCKSRLAVTLDNGEEVALVLPRGTVLRDGDVLVAGDGALVRVVAAPESV LYVRAPDALTLTRAAYHLGNRHTPVEVGADYLKLEYDPVLADMLKRLGACVDHVDMPFQPETGAYGGGHRHGHDETFAED YALAQQVYGEHHAHAHPHSHEHEHEHSHDHAHDHDHDHDHDHDHDHDHDGCGSSCGHDHGHGHRHAHR
Specific function: Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly [H]
COG id: COG2371
COG function: function code O; Urease accessory protein UreE
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ureE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012406 - InterPro: IPR007864 - InterPro: IPR004029 [H]
Pfam domain/function: PF05194 UreE_C; PF02814 UreE_N [H]
EC number: NA
Molecular weight: Translated: 25149; Mature: 25149
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTIDKLLGAHIKLAPVLIQRAPTLTLAFDARCKSRLAVTLDNGEEVALVLPRGTVLRDG CCCHHHHHCCCHHHHHHHHHCCCEEEEEECCCCCCEEEEEECCCCEEEEEECCCCEEECC DVLVAGDGALVRVVAAPESVLYVRAPDALTLTRAAYHLGNRHTPVEVGADYLKLEYDPVL CEEEECCCEEEEEEECCCEEEEEECCCCHHHHHHHHHHCCCCCCHHHCCCEEEEECCHHH ADMLKRLGACVDHVDMPFQPETGAYGGGHRHGHDETFAEDYALAQQVYGEHHAHAHPHSH HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC EHEHEHSHDHAHDHDHDHDHDHDHDHDHDGCGSSCGHDHGHGHRHAHR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRTIDKLLGAHIKLAPVLIQRAPTLTLAFDARCKSRLAVTLDNGEEVALVLPRGTVLRDG CCCHHHHHCCCHHHHHHHHHCCCEEEEEECCCCCCEEEEEECCCCEEEEEECCCCEEECC DVLVAGDGALVRVVAAPESVLYVRAPDALTLTRAAYHLGNRHTPVEVGADYLKLEYDPVL CEEEECCCEEEEEEECCCEEEEEECCCCHHHHHHHHHHCCCCCCHHHCCCEEEEECCHHH ADMLKRLGACVDHVDMPFQPETGAYGGGHRHGHDETFAEDYALAQQVYGEHHAHAHPHSH HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC EHEHEHSHDHAHDHDHDHDHDHDHDHDHDGCGSSCGHDHGHGHRHAHR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA