| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is cysH1 [H]
Identifier: 186476984
GI number: 186476984
Start: 2505919
End: 2506659
Strand: Reverse
Name: cysH1 [H]
Synonym: Bphy_2233
Alternate gene names: 186476984
Gene position: 2506659-2505919 (Counterclockwise)
Preceding gene: 186476985
Following gene: 186476983
Centisome position: 72.05
GC content: 63.97
Gene sequence:
>741_bases ATGACGGACGCTGCCGCTCTCACGCCCGAGCTTCAGGCGAAGATCGAGCGTCTCGACGCGCTGCTCGATACGATCGGCCA GCGTCACGAGGCGGTCAAGTTCGCCAGCAGCCTCGCAGCCGAAGACATGCTGCTGACGCACGCAATTCTGTCCCGCGGCG TCAAGATTGGCATCTTCTCCCTTAATACGGGTCGCCTTCATGCGGAAACGCTCGGTATGATCGAGCGCGTGCGCGAACGC TATGGATACGACATCGAACAGTTTCATCCGCAAGCGGCCGCGGTCGACGAATACGTCGCGCAGCATGGCTTGAATGCGTT CTACGAAAGCATCGACCTGCGCAAGCGGTGCTGCGAAATCCGCAAGGTCGAGCCGCTGAACCGCGCGCTTGCCGACGTCG GCGCATGGGTCACCGGTCAGCGTCGCGAGCAGTCGGTGACGCGTGCGGAACTGCACGAGGAAGAGCACGACGGCGCGCGC AACATCGCGAAGTACAACCCGCTCGCCGACTGGACGGAAGCCGACGTATGGGCTTACCTGAAGGCGTTCGACGTGCCCGT GAATCCGCTGCATGCACGCGGCTATCCGAGCATCGGCTGCGAGCCGTGCACGCGGGCCGTGCGCCCTGGCGAAGACAGCC GGGCAGGGCGCTGGTGGTGGGAATCGCGCGACACGAAGGAATGCGGTTTGCACATTACGACGATCCCGGTGACGGTGATC GGCGAGAACGCCTCGGCCTGA
Upstream 100 bases:
>100_bases CATTCACCGAATTCACCGTGCAATACCAGGGTGCGTTCGACGATCCGTCGCCGCTGTTCCGTCGGCGCGAAGCGGCCGCT GCTGCGCAAAAGGCCACGGC
Downstream 100 bases:
>100_bases TGTGCATCCCCACGCCGACGACGCAGATTTCGATTGAATCTTTACGTGTCGCATGCATCGGGTGAGAGCCCGACCATGCG ACACGAACCAACGAAGGACC
Product: phosphoadenosine phosphosulfate reductase
Products: NA
Alternate protein names: 3'-phosphoadenylylsulfate reductase; PAPS reductase, thioredoxin dependent; PAPS sulfotransferase; PAdoPS reductase [H]
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MTDAAALTPELQAKIERLDALLDTIGQRHEAVKFASSLAAEDMLLTHAILSRGVKIGIFSLNTGRLHAETLGMIERVRER YGYDIEQFHPQAAAVDEYVAQHGLNAFYESIDLRKRCCEIRKVEPLNRALADVGAWVTGQRREQSVTRAELHEEEHDGAR NIAKYNPLADWTEADVWAYLKAFDVPVNPLHARGYPSIGCEPCTRAVRPGEDSRAGRWWWESRDTKECGLHITTIPVTVI GENASA
Sequences:
>Translated_246_residues MTDAAALTPELQAKIERLDALLDTIGQRHEAVKFASSLAAEDMLLTHAILSRGVKIGIFSLNTGRLHAETLGMIERVRER YGYDIEQFHPQAAAVDEYVAQHGLNAFYESIDLRKRCCEIRKVEPLNRALADVGAWVTGQRREQSVTRAELHEEEHDGAR NIAKYNPLADWTEADVWAYLKAFDVPVNPLHARGYPSIGCEPCTRAVRPGEDSRAGRWWWESRDTKECGLHITTIPVTVI GENASA >Mature_245_residues TDAAALTPELQAKIERLDALLDTIGQRHEAVKFASSLAAEDMLLTHAILSRGVKIGIFSLNTGRLHAETLGMIERVRERY GYDIEQFHPQAAAVDEYVAQHGLNAFYESIDLRKRCCEIRKVEPLNRALADVGAWVTGQRREQSVTRAELHEEEHDGARN IAKYNPLADWTEADVWAYLKAFDVPVNPLHARGYPSIGCEPCTRAVRPGEDSRAGRWWWESRDTKECGLHITTIPVTVIG ENASA
Specific function: Reduction of activated sulfate into sulfite [H]
COG id: COG0175
COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAPS reductase family. CysH subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789121, Length=231, Percent_Identity=29.004329004329, Blast_Score=78, Evalue=5e-16, Organism=Saccharomyces cerevisiae, GI6325425, Length=114, Percent_Identity=42.1052631578947, Blast_Score=83, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011798 - InterPro: IPR004511 - InterPro: IPR002500 - InterPro: IPR014729 [H]
Pfam domain/function: PF01507 PAPS_reduct [H]
EC number: =1.8.4.8 [H]
Molecular weight: Translated: 27560; Mature: 27429
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDAAALTPELQAKIERLDALLDTIGQRHEAVKFASSLAAEDMLLTHAILSRGVKIGIFS CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE LNTGRLHAETLGMIERVRERYGYDIEQFHPQAAAVDEYVAQHGLNAFYESIDLRKRCCEI ECCCCHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RKVEPLNRALADVGAWVTGQRREQSVTRAELHEEEHDGARNIAKYNPLADWTEADVWAYL HCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHH KAFDVPVNPLHARGYPSIGCEPCTRAVRPGEDSRAGRWWWESRDTKECGLHITTIPVTVI HHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHCEEEEEEEEEEE GENASA CCCCCC >Mature Secondary Structure TDAAALTPELQAKIERLDALLDTIGQRHEAVKFASSLAAEDMLLTHAILSRGVKIGIFS CCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE LNTGRLHAETLGMIERVRERYGYDIEQFHPQAAAVDEYVAQHGLNAFYESIDLRKRCCEI ECCCCHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RKVEPLNRALADVGAWVTGQRREQSVTRAELHEEEHDGARNIAKYNPLADWTEADVWAYL HCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHH KAFDVPVNPLHARGYPSIGCEPCTRAVRPGEDSRAGRWWWESRDTKECGLHITTIPVTVI HHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHCEEEEEEEEEEE GENASA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]