| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is cysD [H]
Identifier: 186476983
GI number: 186476983
Start: 2504851
End: 2505813
Strand: Reverse
Name: cysD [H]
Synonym: Bphy_2232
Alternate gene names: 186476983
Gene position: 2505813-2504851 (Counterclockwise)
Preceding gene: 186476984
Following gene: 186476982
Centisome position: 72.02
GC content: 62.41
Gene sequence:
>963_bases ATGAGCACGACGCTCGATTCGAATCTCAACGCACCGCTGTCCGTGACGGCGAACCGGATGGATCACCTCGACTGGCTTGA GGCCGAGTCGATTCACATCCTGCGCGAACTCGTCGCCGAATGCAGCAAGCCCGCGCTGCTGTTTTCGGGCGGCAAGGACT CCGTCGTCGTGCTGGCGCTCGCGTTGAAGGCATTCGGCCTCGGCGCGAACCGCAAGACGCAGCTGCCGTTCCCGCTCGTG CACATCGACACGGGTCACAACTACGATGAAGTGATCGACTTCCGCGATCGCCGCGCGCAAGAGATCGGTGCGCAACTGGT GGTCGGTCACGTCGAAGATTCGATCAAGCGCGGCACCGTGCGTCTGCGTCGCGAAACGGACTCGCGCAACGCGGCGCAAG CCGTCACGCTGCTCGAAACTATCGAGCAATACGGCTACACGGCGATGATCGGCGGTGCGCGCCGCGACGAAGAAAAGGCG CGCGCGAAAGAGCGCATCTTTTCGTTCCGCGACGAGTTCGGCCAGTGGGATCCAAAGGCGCAGCGCCCGGAACTGTGGAG CCTCTATAACGCGCGTCTGCATCAGGGCGAGCATCTGCGCGTGTTCCCGATCTCGAACTGGACGGAACTCGATGTGTGGC AATACATCGCCCGCGAGAACCTCGAACTGCCGTCCATCTACTACGCGCACAAGCGCGAGATCGTACGCCGCAACGGCCTG CTCGTGCCCGTGACGCCGCTCACGCCGATCCGCGAAGGCGAGTCGAGCGAACAGGCGCTGGTGCGCTTCCGCACGGTGGG CGATATCAGTTGCACGTGCCCGGTTGAAAGCGATGCGGACGATGTCGAAAAGATCATCGCCGAAACGGCCGTGACGGAAA TCACGGAACGTGGCGCGACGCGCATGGACGACCAGACGTCGGAAGCAGCGATGGAACAGCGCAAGAAGCAAGGTTATTTC TAA
Upstream 100 bases:
>100_bases ATCCCCACGCCGACGACGCAGATTTCGATTGAATCTTTACGTGTCGCATGCATCGGGTGAGAGCCCGACCATGCGACACG AACCAACGAAGGACCCAAAC
Downstream 100 bases:
>100_bases AGAGCACGCAGAGGAAAGAGTCAACATGAGCCGCATTGAGCAACCCGCGCATCAACCTGAAGACCTCGGCGTGCTTCGTT TCATCACGGCAGGCAGCGTC
Product: sulfate adenylyltransferase subunit 2
Products: NA
Alternate protein names: ATP-sulfurylase small subunit; Sulfate adenylate transferase; SAT [H]
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MSTTLDSNLNAPLSVTANRMDHLDWLEAESIHILRELVAECSKPALLFSGGKDSVVVLALALKAFGLGANRKTQLPFPLV HIDTGHNYDEVIDFRDRRAQEIGAQLVVGHVEDSIKRGTVRLRRETDSRNAAQAVTLLETIEQYGYTAMIGGARRDEEKA RAKERIFSFRDEFGQWDPKAQRPELWSLYNARLHQGEHLRVFPISNWTELDVWQYIARENLELPSIYYAHKREIVRRNGL LVPVTPLTPIREGESSEQALVRFRTVGDISCTCPVESDADDVEKIIAETAVTEITERGATRMDDQTSEAAMEQRKKQGYF
Sequences:
>Translated_320_residues MSTTLDSNLNAPLSVTANRMDHLDWLEAESIHILRELVAECSKPALLFSGGKDSVVVLALALKAFGLGANRKTQLPFPLV HIDTGHNYDEVIDFRDRRAQEIGAQLVVGHVEDSIKRGTVRLRRETDSRNAAQAVTLLETIEQYGYTAMIGGARRDEEKA RAKERIFSFRDEFGQWDPKAQRPELWSLYNARLHQGEHLRVFPISNWTELDVWQYIARENLELPSIYYAHKREIVRRNGL LVPVTPLTPIREGESSEQALVRFRTVGDISCTCPVESDADDVEKIIAETAVTEITERGATRMDDQTSEAAMEQRKKQGYF >Mature_319_residues STTLDSNLNAPLSVTANRMDHLDWLEAESIHILRELVAECSKPALLFSGGKDSVVVLALALKAFGLGANRKTQLPFPLVH IDTGHNYDEVIDFRDRRAQEIGAQLVVGHVEDSIKRGTVRLRRETDSRNAAQAVTLLETIEQYGYTAMIGGARRDEEKAR AKERIFSFRDEFGQWDPKAQRPELWSLYNARLHQGEHLRVFPISNWTELDVWQYIARENLELPSIYYAHKREIVRRNGLL VPVTPLTPIREGESSEQALVRFRTVGDISCTCPVESDADDVEKIIAETAVTEITERGATRMDDQTSEAAMEQRKKQGYF
Specific function: First step in the sulfate activation pathway. This reaction occurs early in the reductive branch of the cysteine biosynthetic pathway. [C]
COG id: COG0175
COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAPS reductase family. CysD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789109, Length=304, Percent_Identity=45.3947368421053, Blast_Score=263, Evalue=1e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002500 - InterPro: IPR014729 - InterPro: IPR011784 [H]
Pfam domain/function: PF01507 PAPS_reduct [H]
EC number: =2.7.7.4 [H]
Molecular weight: Translated: 36294; Mature: 36163
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTLDSNLNAPLSVTANRMDHLDWLEAESIHILRELVAECSKPALLFSGGKDSVVVLAL CCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHH ALKAFGLGANRKTQLPFPLVHIDTGHNYDEVIDFRDRRAQEIGAQLVVGHVEDSIKRGTV HHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHCCE RLRRETDSRNAAQAVTLLETIEQYGYTAMIGGARRDEEKARAKERIFSFRDEFGQWDPKA EEEECCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCC QRPELWSLYNARLHQGEHLRVFPISNWTELDVWQYIARENLELPSIYYAHKREIVRRNGL CCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC LVPVTPLTPIREGESSEQALVRFRTVGDISCTCPVESDADDVEKIIAETAVTEITERGAT EEEECCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCC RMDDQTSEAAMEQRKKQGYF CCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure STTLDSNLNAPLSVTANRMDHLDWLEAESIHILRELVAECSKPALLFSGGKDSVVVLAL CCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHH ALKAFGLGANRKTQLPFPLVHIDTGHNYDEVIDFRDRRAQEIGAQLVVGHVEDSIKRGTV HHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHCCE RLRRETDSRNAAQAVTLLETIEQYGYTAMIGGARRDEEKARAKERIFSFRDEFGQWDPKA EEEECCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCC QRPELWSLYNARLHQGEHLRVFPISNWTELDVWQYIARENLELPSIYYAHKREIVRRNGL CCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCC LVPVTPLTPIREGESSEQALVRFRTVGDISCTCPVESDADDVEKIIAETAVTEITERGAT EEEECCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCC RMDDQTSEAAMEQRKKQGYF CCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]