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The map label for this gene is sodC2 [H]

Identifier: 186476939

GI number: 186476939

Start: 2456417

End: 2457037

Strand: Reverse

Name: sodC2 [H]

Synonym: Bphy_2188

Alternate gene names: 186476939

Gene position: 2457037-2456417 (Counterclockwise)

Preceding gene: 186476940

Following gene: 186476938

Centisome position: 70.62

GC content: 66.18

Gene sequence:

>621_bases
ATGCGGCCCTGCTCGCGGTATCATGTCGGCTTCATCAGGTCCGGCAACGCGGTCGCGGGGACGGCCGGCGCTCGACAAGA
GGATCGCATGAAAAAACGAATCGGCGGCGAGGCGATCAAGACCATCGTCGTCCTGGCTGTGACCAGCGCCCTGCTGTCAG
GGTGCATGGGTTTCCTGAAGCCACAGGAGAAACGCGCAGACGCGCAAATGCTGCCGACGCTGGGCAACCAGGCGCGCGGC
ATGGTCACGTTCATCGAGCGTGCCGACGGCGTTCAGGTCACCTACAATCTCACAGGCCTGCCGCCGAACAGCGATCACGC
GCTGCAGGTTCATGAACGCGGTGACTGCAATTCCGCCGACGGATCGGGCGCGGGCGCCGTGTTCGCACCGGCGGCCGAAC
GTCTGAAGTCGGGCGCGCGCGTCGAAGGCGATCTCGGCAATATTCATGCTGATGCAGCTGGCGTGGCGGCGGGTTTCATC
GTCGCGCCGGACGTGTCGCTCGACGGCGTGCGCTCGGTGTTGCAGCGCGCCGTGCTGCTGCATCGCGAACCCTCCGACCC
TTACGCCTATCCGCAGCACGGCGCCGGTTCTGCGCTCGCGTGCGGGCTGATCCGCCAGTAA

Upstream 100 bases:

>100_bases
CGCATGCTGCTGCATCGCTGCGCGGAGCGGGAAGCGTCCGCGTAGCGCGCTGCACGCGATAACCGAACAACGCCTCGGGG
GTGGGTAGAAAGGGGTCTGA

Downstream 100 bases:

>100_bases
CCCCGGTCTCGGGCTCACGGGCTTTCCGGTCGCCAGTCCCGCACGCCAATCGTTTGCGCGCCGCGCAAACGCCTGCCCGA
CTCCCTGTTTGGGCCTCGGT

Product: superoxide dismutase copper/zinc binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MRPCSRYHVGFIRSGNAVAGTAGARQEDRMKKRIGGEAIKTIVVLAVTSALLSGCMGFLKPQEKRADAQMLPTLGNQARG
MVTFIERADGVQVTYNLTGLPPNSDHALQVHERGDCNSADGSGAGAVFAPAAERLKSGARVEGDLGNIHADAAGVAAGFI
VAPDVSLDGVRSVLQRAVLLHREPSDPYAYPQHGAGSALACGLIRQ

Sequences:

>Translated_206_residues
MRPCSRYHVGFIRSGNAVAGTAGARQEDRMKKRIGGEAIKTIVVLAVTSALLSGCMGFLKPQEKRADAQMLPTLGNQARG
MVTFIERADGVQVTYNLTGLPPNSDHALQVHERGDCNSADGSGAGAVFAPAAERLKSGARVEGDLGNIHADAAGVAAGFI
VAPDVSLDGVRSVLQRAVLLHREPSDPYAYPQHGAGSALACGLIRQ
>Mature_206_residues
MRPCSRYHVGFIRSGNAVAGTAGARQEDRMKKRIGGEAIKTIVVLAVTSALLSGCMGFLKPQEKRADAQMLPTLGNQARG
MVTFIERADGVQVTYNLTGLPPNSDHALQVHERGDCNSADGSGAGAVFAPAAERLKSGARVEGDLGNIHADAAGVAAGFI
VAPDVSLDGVRSVLQRAVLLHREPSDPYAYPQHGAGSALACGLIRQ

Specific function: Destroys radicals which are normally produced within the cells and which are toxic to biological systems [H]

COG id: COG2032

COG function: function code P; Cu/Zn superoxide dismutase

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Cu-Zn superoxide dismutase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018152
- InterPro:   IPR001424 [H]

Pfam domain/function: PF00080 Sod_Cu [H]

EC number: =1.15.1.1 [H]

Molecular weight: Translated: 21500; Mature: 21500

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPCSRYHVGFIRSGNAVAGTAGARQEDRMKKRIGGEAIKTIVVLAVTSALLSGCMGFLK
CCCCCCCCEEEEECCCEEECCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC
PQEKRADAQMLPTLGNQARGMVTFIERADGVQVTYNLTGLPPNSDHALQVHERGDCNSAD
CCHHHCCHHHHCCCCCCCCCHHHEEECCCCEEEEEEEECCCCCCCCEEEEECCCCCCCCC
GSGAGAVFAPAAERLKSGARVEGDLGNIHADAAGVAAGFIVAPDVSLDGVRSVLQRAVLL
CCCCCCEEHHHHHHHHCCCEECCCCCCCCCCHHHHHCCEEEECCCCHHHHHHHHHHHHHH
HREPSDPYAYPQHGAGSALACGLIRQ
HCCCCCCCCCCCCCCCCHHHHHHHCC
>Mature Secondary Structure
MRPCSRYHVGFIRSGNAVAGTAGARQEDRMKKRIGGEAIKTIVVLAVTSALLSGCMGFLK
CCCCCCCCEEEEECCCEEECCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC
PQEKRADAQMLPTLGNQARGMVTFIERADGVQVTYNLTGLPPNSDHALQVHERGDCNSAD
CCHHHCCHHHHCCCCCCCCCHHHEEECCCCEEEEEEEECCCCCCCCEEEEECCCCCCCCC
GSGAGAVFAPAAERLKSGARVEGDLGNIHADAAGVAAGFIVAPDVSLDGVRSVLQRAVLL
CCCCCCEEHHHHHHHHCCCEECCCCCCCCCCHHHHHCCEEEECCCCHHHHHHHHHHHHHH
HREPSDPYAYPQHGAGSALACGLIRQ
HCCCCCCCCCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]