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The map label for this gene is dcd [H]

Identifier: 186476938

GI number: 186476938

Start: 2455539

End: 2456108

Strand: Reverse

Name: dcd [H]

Synonym: Bphy_2187

Alternate gene names: 186476938

Gene position: 2456108-2455539 (Counterclockwise)

Preceding gene: 186476939

Following gene: 186476937

Centisome position: 70.59

GC content: 57.19

Gene sequence:

>570_bases
ATGAGCATCAAATCCGACAAGTGGATCCGGCGCATGGCCGAAGAGCACAACATGATCGAGCCGTTCGCGCCGAATCAGGT
GCGCGCGACGGAAGACGGTCGCAAGATCGTCAGCTACGGCACCTCGAGCTACGGCTACGACATTCGCTGTGCCGACGAAT
TCAAGATCTTCACGAACATCAACTCGACCATCGTCGATCCGAAGAACTTTGACGAGAAATCGTTTGTCGATTTCAAGGGC
GACGTCTGCATCATTCCGCCGAACTCGTTCGCGCTCGCGCGCACGGTCGAATATTTCCGCATTCCGCGCAGCGTGCTGAC
GGTGTGCCTCGGCAAGTCGACGTATGCGCGCTGCGGCATCATCGTCAATGTGACGCCGTTCGAACCGGAGTGGGAAGGGC
ACGTCACGCTCGAATTCTCGAATACGACACCTTTGCCTGCGAAAATCTACGCGAACGAAGGCGTCGCGCAGGTGCTGTTC
TTCGAAAGCGACGAGATTTGCGACGTGTCGTACGCGGATCGCGGCGGCAAGTATCAAGGTCAGCACGGCGTAACGTTGCC
TAAGACGTAA

Upstream 100 bases:

>100_bases
TCGCGTAAAATAAGCGCCTTTCGTCCGGCGGCACGCGTTGCGAAAGCGGCACGCAAGCGCCAGCCGGCCCGATTTCACCT
CCCGTCAGCAGCGTTCACCT

Downstream 100 bases:

>100_bases
CGAAAACGCGCATTGAATCACCAGCTATCCGGGTGACCGCTGCGCTTAACCAGCCCAGCGGTCGTTCTTTTTGGAGAATC
GCCCATGAAGTTCCGTTTTC

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase [H]

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MSIKSDKWIRRMAEEHNMIEPFAPNQVRATEDGRKIVSYGTSSYGYDIRCADEFKIFTNINSTIVDPKNFDEKSFVDFKG
DVCIIPPNSFALARTVEYFRIPRSVLTVCLGKSTYARCGIIVNVTPFEPEWEGHVTLEFSNTTPLPAKIYANEGVAQVLF
FESDEICDVSYADRGGKYQGQHGVTLPKT

Sequences:

>Translated_189_residues
MSIKSDKWIRRMAEEHNMIEPFAPNQVRATEDGRKIVSYGTSSYGYDIRCADEFKIFTNINSTIVDPKNFDEKSFVDFKG
DVCIIPPNSFALARTVEYFRIPRSVLTVCLGKSTYARCGIIVNVTPFEPEWEGHVTLEFSNTTPLPAKIYANEGVAQVLF
FESDEICDVSYADRGGKYQGQHGVTLPKT
>Mature_188_residues
SIKSDKWIRRMAEEHNMIEPFAPNQVRATEDGRKIVSYGTSSYGYDIRCADEFKIFTNINSTIVDPKNFDEKSFVDFKGD
VCIIPPNSFALARTVEYFRIPRSVLTVCLGKSTYARCGIIVNVTPFEPEWEGHVTLEFSNTTPLPAKIYANEGVAQVLFF
ESDEICDVSYADRGGKYQGQHGVTLPKT

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011962
- InterPro:   IPR008180 [H]

Pfam domain/function: PF00692 dUTPase [H]

EC number: =3.5.4.13 [H]

Molecular weight: Translated: 21325; Mature: 21194

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIKSDKWIRRMAEEHNMIEPFAPNQVRATEDGRKIVSYGTSSYGYDIRCADEFKIFTNI
CCCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCCEEEEECCCCCCEEEEECCCEEEEECC
NSTIVDPKNFDEKSFVDFKGDVCIIPPNSFALARTVEYFRIPRSVLTVCLGKSTYARCGI
CCEEECCCCCCCCCEEECCCCEEEECCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCEE
IVNVTPFEPEWEGHVTLEFSNTTPLPAKIYANEGVAQVLFFESDEICDVSYADRGGKYQG
EEEECCCCCCCCCEEEEEECCCCCCCEEEECCCCEEEEEEECCCCEEEEEECCCCCCCCC
QHGVTLPKT
CCCCCCCCC
>Mature Secondary Structure 
SIKSDKWIRRMAEEHNMIEPFAPNQVRATEDGRKIVSYGTSSYGYDIRCADEFKIFTNI
CCCHHHHHHHHHHHCCCCCCCCCCCEEECCCCCEEEEECCCCCCEEEEECCCEEEEECC
NSTIVDPKNFDEKSFVDFKGDVCIIPPNSFALARTVEYFRIPRSVLTVCLGKSTYARCGI
CCEEECCCCCCCCCEEECCCCEEEECCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCEE
IVNVTPFEPEWEGHVTLEFSNTTPLPAKIYANEGVAQVLFFESDEICDVSYADRGGKYQG
EEEECCCCCCCCCEEEEEECCCCCCCEEEECCCCEEEEEEECCCCEEEEEECCCCCCCCC
QHGVTLPKT
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA