| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is yhhW [C]
Identifier: 186476913
GI number: 186476913
Start: 2424001
End: 2424708
Strand: Reverse
Name: yhhW [C]
Synonym: Bphy_2162
Alternate gene names: 186476913
Gene position: 2424708-2424001 (Counterclockwise)
Preceding gene: 186476919
Following gene: 186476911
Centisome position: 69.69
GC content: 65.82
Gene sequence:
>708_bases ATGATCAGGATCCGCCGTTCCGACGAGCGTGGCCACGCCAACCACGGATGGCTGAACGCGAAGCACAGCTTCTCGTTTGC CGACTACTACGATCCCGAGCACATGCATTTCGGTCCGCTGCGCGTGATCAACGAAGACCGGATCGCCGCAGGGCAGGGGT TCGGCACGCACGGCCATCGCGACATGGAAATCGTCACTTATGTGCTCGACGGCGCGTTGTCGCACCGCGACAGCCTGGGC AACGGCTCGACGATCCGCCCGGGCGACGTGCAGCGGATGAGCGCGGGCACGGGCGTGATGCACAGCGAGTTCAACGCCTC GCAGGACGACCCGCTGCATCTGCTGCAGATCTGGATCATCCCGAAGCGTACGGGCGATGCGCCGGGCTACGAGGAAAAGC GCTTTGAAGATGCCGACAAGCGCGGCCGGCTACGCGTCGTGGCGTCGCCGGAAGGCCGCGACGGCTCGGTGACGATTCAC GCCGATGCGTCGATCCATGCTGGCCTGTTTGATGGCGCGGAGCGCGCCGAATACATGCTCGAGGCCGGGCGCCAGGCATA TGTGCACGTCGCGCGCGGCGCCGTCACGGTCAACGGCGAGGCGCTCAAGGCGGGCGATGCCGCGATGGTCTCCGATGCCA CGCACGTCACCGTCGAAAACGGCGAAGGCGCCGAAGTGCTGCTGTTCGATCTGGGGCAGTTGCGTTGA
Upstream 100 bases:
>100_bases TGCCGCCATTTCTGAAACGATCCGGTGCGGCGGCGCAGATTGTTCTGATCGCGCACAGCCCATACATTCCCTCCATTGCC AATTTTCACGGGAGAGTCAG
Downstream 100 bases:
>100_bases GCGAACAGCGCGTTCGTCGGTACATTCCGACGTGCCACGTAGCAACGCCACGGAAGCGCTTTGCCGTGGCGTTTTTCTTG TCGGGGCGGTGCGAGCGTTC
Product: pirin domain-containing protein
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein sll1773 [H]
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MIRIRRSDERGHANHGWLNAKHSFSFADYYDPEHMHFGPLRVINEDRIAAGQGFGTHGHRDMEIVTYVLDGALSHRDSLG NGSTIRPGDVQRMSAGTGVMHSEFNASQDDPLHLLQIWIIPKRTGDAPGYEEKRFEDADKRGRLRVVASPEGRDGSVTIH ADASIHAGLFDGAERAEYMLEAGRQAYVHVARGAVTVNGEALKAGDAAMVSDATHVTVENGEGAEVLLFDLGQLR
Sequences:
>Translated_235_residues MIRIRRSDERGHANHGWLNAKHSFSFADYYDPEHMHFGPLRVINEDRIAAGQGFGTHGHRDMEIVTYVLDGALSHRDSLG NGSTIRPGDVQRMSAGTGVMHSEFNASQDDPLHLLQIWIIPKRTGDAPGYEEKRFEDADKRGRLRVVASPEGRDGSVTIH ADASIHAGLFDGAERAEYMLEAGRQAYVHVARGAVTVNGEALKAGDAAMVSDATHVTVENGEGAEVLLFDLGQLR >Mature_235_residues MIRIRRSDERGHANHGWLNAKHSFSFADYYDPEHMHFGPLRVINEDRIAAGQGFGTHGHRDMEIVTYVLDGALSHRDSLG NGSTIRPGDVQRMSAGTGVMHSEFNASQDDPLHLLQIWIIPKRTGDAPGYEEKRFEDADKRGRLRVVASPEGRDGSVTIH ADASIHAGLFDGAERAEYMLEAGRQAYVHVARGAVTVNGEALKAGDAAMVSDATHVTVENGEGAEVLLFDLGQLR
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Homo sapiens, GI66363697, Length=115, Percent_Identity=33.0434782608696, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI4505823, Length=115, Percent_Identity=33.0434782608696, Blast_Score=71, Evalue=1e-12, Organism=Escherichia coli, GI1789847, Length=231, Percent_Identity=46.7532467532467, Blast_Score=234, Evalue=5e-63, Organism=Escherichia coli, GI1789493, Length=238, Percent_Identity=33.1932773109244, Blast_Score=129, Evalue=1e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 25722; Mature: 25722
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRIRRSDERGHANHGWLNAKHSFSFADYYDPEHMHFGPLRVINEDRIAAGQGFGTHGHR CEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCEECCCCCCCCCCC DMEIVTYVLDGALSHRDSLGNGSTIRPGDVQRMSAGTGVMHSEFNASQDDPLHLLQIWII CHHHHEEEHHHHHHHHCCCCCCCEECCCCCEEECCCCCEEECCCCCCCCCCEEEEEEEEE PKRTGDAPGYEEKRFEDADKRGRLRVVASPEGRDGSVTIHADASIHAGLFDGAERAEYML ECCCCCCCCCCHHHHCCCCCCCCEEEEECCCCCCCEEEEEECCEEECCCCCCHHHHHHHH EAGRQAYVHVARGAVTVNGEALKAGDAAMVSDATHVTVENGEGAEVLLFDLGQLR HCCCEEEEEEECCEEEECCCEEECCCCEEECCCEEEEEECCCCCEEEEEECCCCC >Mature Secondary Structure MIRIRRSDERGHANHGWLNAKHSFSFADYYDPEHMHFGPLRVINEDRIAAGQGFGTHGHR CEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCEECCCCCCCCCCC DMEIVTYVLDGALSHRDSLGNGSTIRPGDVQRMSAGTGVMHSEFNASQDDPLHLLQIWII CHHHHEEEHHHHHHHHCCCCCCCEECCCCCEEECCCCCEEECCCCCCCCCCEEEEEEEEE PKRTGDAPGYEEKRFEDADKRGRLRVVASPEGRDGSVTIHADASIHAGLFDGAERAEYML ECCCCCCCCCCHHHHCCCCCCCCEEEEECCCCCCCEEEEEECCEEECCCCCCHHHHHHHH EAGRQAYVHVARGAVTVNGEALKAGDAAMVSDATHVTVENGEGAEVLLFDLGQLR HCCCEEEEEEECCEEEECCCEEECCCCEEECCCEEEEEECCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]