Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is yhhW [C]

Identifier: 186476913

GI number: 186476913

Start: 2424001

End: 2424708

Strand: Reverse

Name: yhhW [C]

Synonym: Bphy_2162

Alternate gene names: 186476913

Gene position: 2424708-2424001 (Counterclockwise)

Preceding gene: 186476919

Following gene: 186476911

Centisome position: 69.69

GC content: 65.82

Gene sequence:

>708_bases
ATGATCAGGATCCGCCGTTCCGACGAGCGTGGCCACGCCAACCACGGATGGCTGAACGCGAAGCACAGCTTCTCGTTTGC
CGACTACTACGATCCCGAGCACATGCATTTCGGTCCGCTGCGCGTGATCAACGAAGACCGGATCGCCGCAGGGCAGGGGT
TCGGCACGCACGGCCATCGCGACATGGAAATCGTCACTTATGTGCTCGACGGCGCGTTGTCGCACCGCGACAGCCTGGGC
AACGGCTCGACGATCCGCCCGGGCGACGTGCAGCGGATGAGCGCGGGCACGGGCGTGATGCACAGCGAGTTCAACGCCTC
GCAGGACGACCCGCTGCATCTGCTGCAGATCTGGATCATCCCGAAGCGTACGGGCGATGCGCCGGGCTACGAGGAAAAGC
GCTTTGAAGATGCCGACAAGCGCGGCCGGCTACGCGTCGTGGCGTCGCCGGAAGGCCGCGACGGCTCGGTGACGATTCAC
GCCGATGCGTCGATCCATGCTGGCCTGTTTGATGGCGCGGAGCGCGCCGAATACATGCTCGAGGCCGGGCGCCAGGCATA
TGTGCACGTCGCGCGCGGCGCCGTCACGGTCAACGGCGAGGCGCTCAAGGCGGGCGATGCCGCGATGGTCTCCGATGCCA
CGCACGTCACCGTCGAAAACGGCGAAGGCGCCGAAGTGCTGCTGTTCGATCTGGGGCAGTTGCGTTGA

Upstream 100 bases:

>100_bases
TGCCGCCATTTCTGAAACGATCCGGTGCGGCGGCGCAGATTGTTCTGATCGCGCACAGCCCATACATTCCCTCCATTGCC
AATTTTCACGGGAGAGTCAG

Downstream 100 bases:

>100_bases
GCGAACAGCGCGTTCGTCGGTACATTCCGACGTGCCACGTAGCAACGCCACGGAAGCGCTTTGCCGTGGCGTTTTTCTTG
TCGGGGCGGTGCGAGCGTTC

Product: pirin domain-containing protein

Products: NA

Alternate protein names: Putative quercetinase; Pirin-like protein sll1773 [H]

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MIRIRRSDERGHANHGWLNAKHSFSFADYYDPEHMHFGPLRVINEDRIAAGQGFGTHGHRDMEIVTYVLDGALSHRDSLG
NGSTIRPGDVQRMSAGTGVMHSEFNASQDDPLHLLQIWIIPKRTGDAPGYEEKRFEDADKRGRLRVVASPEGRDGSVTIH
ADASIHAGLFDGAERAEYMLEAGRQAYVHVARGAVTVNGEALKAGDAAMVSDATHVTVENGEGAEVLLFDLGQLR

Sequences:

>Translated_235_residues
MIRIRRSDERGHANHGWLNAKHSFSFADYYDPEHMHFGPLRVINEDRIAAGQGFGTHGHRDMEIVTYVLDGALSHRDSLG
NGSTIRPGDVQRMSAGTGVMHSEFNASQDDPLHLLQIWIIPKRTGDAPGYEEKRFEDADKRGRLRVVASPEGRDGSVTIH
ADASIHAGLFDGAERAEYMLEAGRQAYVHVARGAVTVNGEALKAGDAAMVSDATHVTVENGEGAEVLLFDLGQLR
>Mature_235_residues
MIRIRRSDERGHANHGWLNAKHSFSFADYYDPEHMHFGPLRVINEDRIAAGQGFGTHGHRDMEIVTYVLDGALSHRDSLG
NGSTIRPGDVQRMSAGTGVMHSEFNASQDDPLHLLQIWIIPKRTGDAPGYEEKRFEDADKRGRLRVVASPEGRDGSVTIH
ADASIHAGLFDGAERAEYMLEAGRQAYVHVARGAVTVNGEALKAGDAAMVSDATHVTVENGEGAEVLLFDLGQLR

Specific function: Putative quercetin 2,3-dioxygenase [H]

COG id: COG1741

COG function: function code R; Pirin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pirin family [H]

Homologues:

Organism=Homo sapiens, GI66363697, Length=115, Percent_Identity=33.0434782608696, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI4505823, Length=115, Percent_Identity=33.0434782608696, Blast_Score=71, Evalue=1e-12,
Organism=Escherichia coli, GI1789847, Length=231, Percent_Identity=46.7532467532467, Blast_Score=234, Evalue=5e-63,
Organism=Escherichia coli, GI1789493, Length=238, Percent_Identity=33.1932773109244, Blast_Score=129, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR012093
- InterPro:   IPR003829
- InterPro:   IPR014710 [H]

Pfam domain/function: PF02678 Pirin [H]

EC number: =1.13.11.24 [H]

Molecular weight: Translated: 25722; Mature: 25722

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRIRRSDERGHANHGWLNAKHSFSFADYYDPEHMHFGPLRVINEDRIAAGQGFGTHGHR
CEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCEECCCCCCCCCCC
DMEIVTYVLDGALSHRDSLGNGSTIRPGDVQRMSAGTGVMHSEFNASQDDPLHLLQIWII
CHHHHEEEHHHHHHHHCCCCCCCEECCCCCEEECCCCCEEECCCCCCCCCCEEEEEEEEE
PKRTGDAPGYEEKRFEDADKRGRLRVVASPEGRDGSVTIHADASIHAGLFDGAERAEYML
ECCCCCCCCCCHHHHCCCCCCCCEEEEECCCCCCCEEEEEECCEEECCCCCCHHHHHHHH
EAGRQAYVHVARGAVTVNGEALKAGDAAMVSDATHVTVENGEGAEVLLFDLGQLR
HCCCEEEEEEECCEEEECCCEEECCCCEEECCCEEEEEECCCCCEEEEEECCCCC
>Mature Secondary Structure
MIRIRRSDERGHANHGWLNAKHSFSFADYYDPEHMHFGPLRVINEDRIAAGQGFGTHGHR
CEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCEECCCCCCCCCCC
DMEIVTYVLDGALSHRDSLGNGSTIRPGDVQRMSAGTGVMHSEFNASQDDPLHLLQIWII
CHHHHEEEHHHHHHHHCCCCCCCEECCCCCEEECCCCCEEECCCCCCCCCCEEEEEEEEE
PKRTGDAPGYEEKRFEDADKRGRLRVVASPEGRDGSVTIHADASIHAGLFDGAERAEYML
ECCCCCCCCCCHHHHCCCCCCCCEEEEECCCCCCCEEEEEECCEEECCCCCCHHHHHHHH
EAGRQAYVHVARGAVTVNGEALKAGDAAMVSDATHVTVENGEGAEVLLFDLGQLR
HCCCEEEEEEECCEEEECCCEEECCCCEEECCCEEEEEECCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]