| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is yeeA [H]
Identifier: 186476860
GI number: 186476860
Start: 2364045
End: 2365241
Strand: Reverse
Name: yeeA [H]
Synonym: Bphy_2106
Alternate gene names: 186476860
Gene position: 2365241-2364045 (Counterclockwise)
Preceding gene: 186476861
Following gene: 186476854
Centisome position: 67.98
GC content: 66.67
Gene sequence:
>1197_bases ATGACTCTCGCCGATCCGCCACCCAATCCGCCACGCGAGCGCCTTCCGGGCGCGCCGCCGGAGACGAAGGACGCCGTCAC TGCACGTCTCGCGTCGCGCCGCACGCGCATCGGCCGCCTGGTGCGCGCCGTGACGTCCCCGTATTACCGCTATCGCCACG CGAAGTTTTTCCACAGCCTGCGCGTGGGCCTCGCGATGCTCGTGTCGATTCTCGCGACCACGGGCATCGACATTCCGCAC GGCATCTGGTCGTCGGTCACGCTGCTGGTGGTGATCGGCGGCTTGCAGCATCACGGCAACATCCGCAAGAAGGCGGCCGA GCGCGCCGCGGGCACGCTGCTCGGCGCCGCGCTCGGTCTCGCGCTGATCCTGCAGCAGAACCTGTTCAATTCGCTGACGG TGACCTATGTGCTGATGTCGGTGATCGCGGCGATCTGCGCATGGTTTGCGATCGGCAGCGCCGGCTACGTCGCGCTGTTG ACGGCCATCACGATGTGCATCGTCGCGGGACACGGCGACAACATGATCGACACGGGCCTGTGGCGCACGCTGAACGTGCT GATCGGCATCGTGATCGCGCTGGCGTTTTCGTTCGCGCTGCCGCTGCACGCGACCTATTCGTGGCGCTATCTGCTTGCCG ACAATCTGCGCGAATGCGCGCGCACCTATACGCGGATGATGACGGGCGTGCCGATAGGCGCAGACGAGCAGGTTGCCGCG TTCATCCGCATGGGCAAGCGGCTCGTGCAGCTGCGTTCGCTGATGCCGTCGGTCGCGAAGGAAATCGATCTGCCCATCGC GAAGCTCGACGATATCCAGCGCCTGCATCGTTCGATGCTGAGCGCGCTCGAAATGCTGTCGACGGGTACGCTCGCGCATG CGCAACGATGCGATGCATTCGCGCAGCGCTGCGGGGACGAGACGGGACCGGTCCGCATGACGCTGCTCGGCGCTGCGCGT GCGTTGCGCTTCGCGGGCACCACGCATTTCCGTATGCCGGATGCGGCGGCGTCACCGGTGTCCCTGGCTTGTCAACCAAC GGCGACACAGGACAAAGAAACGGCGCCTGAACTGCAGGGGCCGTTGTGGCTCGCGCAGCGCTTCGCAGAGCAGGTGGAGC GCATGCGCGCACTGCTGGCGGCCACGGAGGCGAACTGGAACATCGAAGGCGGCGGGCGCGCAGCGGCGGCGCGCTAA
Upstream 100 bases:
>100_bases GCCCGCAGCGGATGCTGCGGGCTTTTTCGTTTATGCTCCGGTGGTGTCTGTGTCTGCATGCTCGCTCGCGCATGTGCGCC GAACCCACGTGGGGTCCCCG
Downstream 100 bases:
>100_bases CCGCGAATGGCCACGTCAGCTCGGGTGTTTGTCGCCGTCATGCGGATTGGTGATCATCCACATCACGCCGAATCTGTCGA CGACCATGCCGAAGCCCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MTLADPPPNPPRERLPGAPPETKDAVTARLASRRTRIGRLVRAVTSPYYRYRHAKFFHSLRVGLAMLVSILATTGIDIPH GIWSSVTLLVVIGGLQHHGNIRKKAAERAAGTLLGAALGLALILQQNLFNSLTVTYVLMSVIAAICAWFAIGSAGYVALL TAITMCIVAGHGDNMIDTGLWRTLNVLIGIVIALAFSFALPLHATYSWRYLLADNLRECARTYTRMMTGVPIGADEQVAA FIRMGKRLVQLRSLMPSVAKEIDLPIAKLDDIQRLHRSMLSALEMLSTGTLAHAQRCDAFAQRCGDETGPVRMTLLGAAR ALRFAGTTHFRMPDAAASPVSLACQPTATQDKETAPELQGPLWLAQRFAEQVERMRALLAATEANWNIEGGGRAAAAR
Sequences:
>Translated_398_residues MTLADPPPNPPRERLPGAPPETKDAVTARLASRRTRIGRLVRAVTSPYYRYRHAKFFHSLRVGLAMLVSILATTGIDIPH GIWSSVTLLVVIGGLQHHGNIRKKAAERAAGTLLGAALGLALILQQNLFNSLTVTYVLMSVIAAICAWFAIGSAGYVALL TAITMCIVAGHGDNMIDTGLWRTLNVLIGIVIALAFSFALPLHATYSWRYLLADNLRECARTYTRMMTGVPIGADEQVAA FIRMGKRLVQLRSLMPSVAKEIDLPIAKLDDIQRLHRSMLSALEMLSTGTLAHAQRCDAFAQRCGDETGPVRMTLLGAAR ALRFAGTTHFRMPDAAASPVSLACQPTATQDKETAPELQGPLWLAQRFAEQVERMRALLAATEANWNIEGGGRAAAAR >Mature_397_residues TLADPPPNPPRERLPGAPPETKDAVTARLASRRTRIGRLVRAVTSPYYRYRHAKFFHSLRVGLAMLVSILATTGIDIPHG IWSSVTLLVVIGGLQHHGNIRKKAAERAAGTLLGAALGLALILQQNLFNSLTVTYVLMSVIAAICAWFAIGSAGYVALLT AITMCIVAGHGDNMIDTGLWRTLNVLIGIVIALAFSFALPLHATYSWRYLLADNLRECARTYTRMMTGVPIGADEQVAAF IRMGKRLVQLRSLMPSVAKEIDLPIAKLDDIQRLHRSMLSALEMLSTGTLAHAQRCDAFAQRCGDETGPVRMTLLGAARA LRFAGTTHFRMPDAAASPVSLACQPTATQDKETAPELQGPLWLAQRFAEQVERMRALLAATEANWNIEGGGRAAAAR
Specific function: Unknown
COG id: COG1289
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788318, Length=340, Percent_Identity=30, Blast_Score=131, Evalue=7e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006726 [H]
Pfam domain/function: PF04632 FUSC [H]
EC number: NA
Molecular weight: Translated: 43137; Mature: 43006
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLADPPPNPPRERLPGAPPETKDAVTARLASRRTRIGRLVRAVTSPYYRYRHAKFFHSL CCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVGLAMLVSILATTGIDIPHGIWSSVTLLVVIGGLQHHGNIRKKAAERAAGTLLGAALGL HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH ALILQQNLFNSLTVTYVLMSVIAAICAWFAIGSAGYVALLTAITMCIVAGHGDNMIDTGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHH WRTLNVLIGIVIALAFSFALPLHATYSWRYLLADNLRECARTYTRMMTGVPIGADEQVAA HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH FIRMGKRLVQLRSLMPSVAKEIDLPIAKLDDIQRLHRSMLSALEMLSTGTLAHAQRCDAF HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH AQRCGDETGPVRMTLLGAARALRFAGTTHFRMPDAAASPVSLACQPTATQDKETAPELQG HHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHCC PLWLAQRFAEQVERMRALLAATEANWNIEGGGRAAAAR HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure TLADPPPNPPRERLPGAPPETKDAVTARLASRRTRIGRLVRAVTSPYYRYRHAKFFHSL CCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVGLAMLVSILATTGIDIPHGIWSSVTLLVVIGGLQHHGNIRKKAAERAAGTLLGAALGL HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH ALILQQNLFNSLTVTYVLMSVIAAICAWFAIGSAGYVALLTAITMCIVAGHGDNMIDTGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHH WRTLNVLIGIVIALAFSFALPLHATYSWRYLLADNLRECARTYTRMMTGVPIGADEQVAA HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH FIRMGKRLVQLRSLMPSVAKEIDLPIAKLDDIQRLHRSMLSALEMLSTGTLAHAQRCDAF HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH AQRCGDETGPVRMTLLGAARALRFAGTTHFRMPDAAASPVSLACQPTATQDKETAPELQG HHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHCC PLWLAQRFAEQVERMRALLAATEANWNIEGGGRAAAAR HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]