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The map label for this gene is 186476854

Identifier: 186476854

GI number: 186476854

Start: 2358046

End: 2358426

Strand: Reverse

Name: 186476854

Synonym: Bphy_2100

Alternate gene names: NA

Gene position: 2358426-2358046 (Counterclockwise)

Preceding gene: 186476860

Following gene: 186476853

Centisome position: 67.79

GC content: 60.37

Gene sequence:

>381_bases
ATGAACAGATTCGTCGGCAAACATGTCGTGATCGCAGCGATGTCGGTGCTCGCGGGCTTTGCGGCAACTTCGGCGGCAAC
CGTGCAGGCAGCGGACATCGCGGGCAACGCCAAGGCAGGCCAGGGCAAGGTCGCGATGTGTATCGGCTGTCACGGTATTC
CAGACTATCGTACGGCCTATCCCGAGGTTTACCGGGTGCCGATGCTGGGCGGCCAGAATCAGACCTACCTCGAAAACGCG
CTGCACGCCTACAAAAAGGGCGACCGCCATTTCGACACGATGCATGCGGTCGCCGTGTCGCTGTCCGACCAGGACATCGC
CGACATCGCCGCATACTACTCGGCGCAAACGTCCTCTTCGAAGAACAATCCCGACAAGTGA

Upstream 100 bases:

>100_bases
GCCGATTTTTTTGGCCTGCGTGGCAACCCCGACAAGTACAACGGAGCAGGCCGTTGCCTTTTTGGGCGCCCGTTCCTCCT
CAAGCCAGGTTAAAAGAGCT

Downstream 100 bases:

>100_bases
TCGACGTCGCGTGACGGAGCTCACGTGCTGAATCACTTCGCGGCCGCAATCAGTTTGCATGGGACGGCGGCAGGCGCCGA
AGCGCCGGCTCCCGTCGACA

Product: cytochrome c class I

Products: NA

Alternate protein names: Cytochrome c554 [H]

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MNRFVGKHVVIAAMSVLAGFAATSAATVQAADIAGNAKAGQGKVAMCIGCHGIPDYRTAYPEVYRVPMLGGQNQTYLENA
LHAYKKGDRHFDTMHAVAVSLSDQDIADIAAYYSAQTSSSKNNPDK

Sequences:

>Translated_126_residues
MNRFVGKHVVIAAMSVLAGFAATSAATVQAADIAGNAKAGQGKVAMCIGCHGIPDYRTAYPEVYRVPMLGGQNQTYLENA
LHAYKKGDRHFDTMHAVAVSLSDQDIADIAAYYSAQTSSSKNNPDK
>Mature_126_residues
MNRFVGKHVVIAAMSVLAGFAATSAATVQAADIAGNAKAGQGKVAMCIGCHGIPDYRTAYPEVYRVPMLGGQNQTYLENA
LHAYKKGDRHFDTMHAVAVSLSDQDIADIAAYYSAQTSSSKNNPDK

Specific function: Unknown

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR008168 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 13366; Mature: 13366

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRFVGKHVVIAAMSVLAGFAATSAATVQAADIAGNAKAGQGKVAMCIGCHGIPDYRTAY
CCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCHHCC
PEVYRVPMLGGQNQTYLENALHAYKKGDRHFDTMHAVAVSLSDQDIADIAAYYSAQTSSS
CCCEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHEECCCCHHHHHHHHHHHCCCCC
KNNPDK
CCCCCC
>Mature Secondary Structure
MNRFVGKHVVIAAMSVLAGFAATSAATVQAADIAGNAKAGQGKVAMCIGCHGIPDYRTAY
CCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCHHCC
PEVYRVPMLGGQNQTYLENALHAYKKGDRHFDTMHAVAVSLSDQDIADIAAYYSAQTSSS
CCCEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHEECCCCHHHHHHHHHHHCCCCC
KNNPDK
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2829828 [H]