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The map label for this gene is yobA [H]

Identifier: 186476792

GI number: 186476792

Start: 2288993

End: 2289367

Strand: Reverse

Name: yobA [H]

Synonym: Bphy_2038

Alternate gene names: 186476792

Gene position: 2289367-2288993 (Counterclockwise)

Preceding gene: 186476793

Following gene: 186476791

Centisome position: 65.8

GC content: 57.33

Gene sequence:

>375_bases
ATGAACGCCTTGATGCGTCACCCTACTGCTCGTGCAGCGGCAATCGCCACGCTAGTGCTTTTGCCTGCGCTTGCATGTGC
CCACGGCAAGTTGGAAAACGCAATGCCATCGGCTGGCAGCACAGTCGATGCATCGCCAGAGTCGCTGCGCCTCACTTTCA
ACGAGGACCTCGAGTCTTCGTTCAGCATGATCAAGGTTGTAGACTCATCTGGCGCGCCCGCGACCAGCGAAAAAGCCAAA
GTCGACTCTTCGAACCCGCGCGTACTGATGGTTGCGATTCCGAAGCTAGCCGCCGGCTCGTACACCGTGCAATGGGCCGT
CATGACACATGACGCGCACAAGACGAAGGGTACTTACACTTTTGCGGTGAAGTGA

Upstream 100 bases:

>100_bases
TTGATGGCTCACTCACCGTGACGAAGCTGCAGAAGCAATAAGCATCCAATGGGGTGCCGGACGACGAGAGCACCCGATTC
AAACCAGAGAGGTAACAACC

Downstream 100 bases:

>100_bases
TGAACGACGGTTTCCTCGGCGTATCGCGGCTGGCATGGGTGGCGCTCCAGAACATCAGTTTCACCGTTCTTGTGGGCGCC
TTGCTAAGCGACACATGGTT

Product: copper resistance protein CopC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MNALMRHPTARAAAIATLVLLPALACAHGKLENAMPSAGSTVDASPESLRLTFNEDLESSFSMIKVVDSSGAPATSEKAK
VDSSNPRVLMVAIPKLAAGSYTVQWAVMTHDAHKTKGTYTFAVK

Sequences:

>Translated_124_residues
MNALMRHPTARAAAIATLVLLPALACAHGKLENAMPSAGSTVDASPESLRLTFNEDLESSFSMIKVVDSSGAPATSEKAK
VDSSNPRVLMVAIPKLAAGSYTVQWAVMTHDAHKTKGTYTFAVK
>Mature_124_residues
MNALMRHPTARAAAIATLVLLPALACAHGKLENAMPSAGSTVDASPESLRLTFNEDLESSFSMIKVVDSSGAPATSEKAK
VDSSNPRVLMVAIPKLAAGSYTVQWAVMTHDAHKTKGTYTFAVK

Specific function: Unknown

COG id: COG2372

COG function: function code R; Uncharacterized protein, homolog of Cu resistance protein CopC

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CopC family [H]

Homologues:

Organism=Escherichia coli, GI1788146, Length=114, Percent_Identity=36.8421052631579, Blast_Score=74, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007348
- InterPro:   IPR014755
- InterPro:   IPR014756 [H]

Pfam domain/function: PF04234 CopC [H]

EC number: NA

Molecular weight: Translated: 13043; Mature: 13043

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNALMRHPTARAAAIATLVLLPALACAHGKLENAMPSAGSTVDASPESLRLTFNEDLESS
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC
FSMIKVVDSSGAPATSEKAKVDSSNPRVLMVAIPKLAAGSYTVQWAVMTHDAHKTKGTYT
EEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEEECCCCCCCCEEE
FAVK
EEEC
>Mature Secondary Structure
MNALMRHPTARAAAIATLVLLPALACAHGKLENAMPSAGSTVDASPESLRLTFNEDLESS
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC
FSMIKVVDSSGAPATSEKAKVDSSNPRVLMVAIPKLAAGSYTVQWAVMTHDAHKTKGTYT
EEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEEECCCCCCCCEEE
FAVK
EEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Cu [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]