| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
Click here to switch to the map view.
The map label for this gene is 186476789
Identifier: 186476789
GI number: 186476789
Start: 2285959
End: 2286594
Strand: Reverse
Name: 186476789
Synonym: Bphy_2034
Alternate gene names: NA
Gene position: 2286594-2285959 (Counterclockwise)
Preceding gene: 186476790
Following gene: 186476777
Centisome position: 65.72
GC content: 65.41
Gene sequence:
>636_bases ATGAGCGTGCGTATCGACGCGGCTGCATATTCGTCGGAGGCGGACTACGCCGCGCTCGATCCTCGCGCGCGCGATGTGCT CGACTGCTGGTTCGGCTTGCCCGGGTCCGACGAATACGGCAAGGATCAGAAGCGCTGGTTCAAGCGCAGCGATGCGTTCG ACGCGATGCTGCGCGAGCGATTCGGCGCGCTGATCGAAGCGGCGCTCGCGCATGAACTCGACGCGTGGCGGGCGACGCCG CTTGGATCGCTCGCGCTCGTGATCGTGCTCGATCAGGTCACGCGCAACTGTCATCGCGAGACGGGGCATATGTACGACGG CGATGCACAGGCGCTTGCGATCGCGCGCCGCATGGTCGAAGACGGCGGCGATGTGCTGCTGCCAACCGTGTATCACCGCG CGTTCGCGTATATCCCGTTCGAGCACGACGAAACGATCGAAGGGCAGCGCGAAGGCGTGCGTTTGTATGCGTTGCTCGAA GCGGGCGGGCTCGATCCGTCGTATGCGCGCTCGGCTGTGCGGCACGCTCGCATAGTTGAGCGCTTCGGGCGCTTTCCGCA TCGCAATGCGCTGCTGGGCCGTCCGTCGACCGACGAGGAGATTGCGTTCCTGCGCGAGCCGGGCTCGTCGTTCTAA
Upstream 100 bases:
>100_bases GCGGCACGCACGTGCGCAACACGCAGGAGATCGGCGGGCTGCGCGTCGCAAAACTCGAAAAGAAAAGCGCGCGCACGCGG CGGCTCGTGCTGGAGCTTGC
Downstream 100 bases:
>100_bases TGCGTTCCGGCCCAACGCAGATTCAGTCGCGGGCGCCCGTGGCTGACGGCGTGCGCACGAACACACGCAGCAACTCGTCG TTGTCGCCAGGACGTGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MSVRIDAAAYSSEADYAALDPRARDVLDCWFGLPGSDEYGKDQKRWFKRSDAFDAMLRERFGALIEAALAHELDAWRATP LGSLALVIVLDQVTRNCHRETGHMYDGDAQALAIARRMVEDGGDVLLPTVYHRAFAYIPFEHDETIEGQREGVRLYALLE AGGLDPSYARSAVRHARIVERFGRFPHRNALLGRPSTDEEIAFLREPGSSF
Sequences:
>Translated_211_residues MSVRIDAAAYSSEADYAALDPRARDVLDCWFGLPGSDEYGKDQKRWFKRSDAFDAMLRERFGALIEAALAHELDAWRATP LGSLALVIVLDQVTRNCHRETGHMYDGDAQALAIARRMVEDGGDVLLPTVYHRAFAYIPFEHDETIEGQREGVRLYALLE AGGLDPSYARSAVRHARIVERFGRFPHRNALLGRPSTDEEIAFLREPGSSF >Mature_210_residues SVRIDAAAYSSEADYAALDPRARDVLDCWFGLPGSDEYGKDQKRWFKRSDAFDAMLRERFGALIEAALAHELDAWRATPL GSLALVIVLDQVTRNCHRETGHMYDGDAQALAIARRMVEDGGDVLLPTVYHRAFAYIPFEHDETIEGQREGVRLYALLEA GGLDPSYARSAVRHARIVERFGRFPHRNALLGRPSTDEEIAFLREPGSSF
Specific function: Unknown
COG id: COG3803
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23685; Mature: 23554
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVRIDAAAYSSEADYAALDPRARDVLDCWFGLPGSDEYGKDQKRWFKRSDAFDAMLRER CCEEECHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH FGALIEAALAHELDAWRATPLGSLALVIVLDQVTRNCHRETGHMYDGDAQALAIARRMVE HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH DGGDVLLPTVYHRAFAYIPFEHDETIEGQREGVRLYALLEAGGLDPSYARSAVRHARIVE CCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHH RFGRFPHRNALLGRPSTDEEIAFLREPGSSF HHCCCCCCCCCCCCCCCCHHHHHCCCCCCCC >Mature Secondary Structure SVRIDAAAYSSEADYAALDPRARDVLDCWFGLPGSDEYGKDQKRWFKRSDAFDAMLRER CEEECHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH FGALIEAALAHELDAWRATPLGSLALVIVLDQVTRNCHRETGHMYDGDAQALAIARRMVE HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH DGGDVLLPTVYHRAFAYIPFEHDETIEGQREGVRLYALLEAGGLDPSYARSAVRHARIVE CCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHH RFGRFPHRNALLGRPSTDEEIAFLREPGSSF HHCCCCCCCCCCCCCCCCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA