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The map label for this gene is yaaA [C]

Identifier: 186476734

GI number: 186476734

Start: 2230387

End: 2231169

Strand: Reverse

Name: yaaA [C]

Synonym: Bphy_1979

Alternate gene names: 186476734

Gene position: 2231169-2230387 (Counterclockwise)

Preceding gene: 186476737

Following gene: 186476733

Centisome position: 64.13

GC content: 59.13

Gene sequence:

>783_bases
ATGATAATCGTTCTGTCGCCGGCCAAATCGCTCGACTACGAGACGCCGCCGCACGTCAAGAAGCATACGATCCCCGATTT
CGTCGATGACGCCGCCGAACTGATCGGCGGTCTGCGCCGTTTGTCGCCGCAAGACATCGCATCGCTGATGGACATTTCCG
ATCAGCTCGCGCATTTGAATTTCCAGCGTTACGCCGACTGGTCGCCGACCTTCGATTCGTCGAACTCGAAGCAGGCCGTG
CTCGCGTTCAACGGCGACGTGTATGAAGGCTTCGACGCGAAATCGCTGTCCGCATCCGATCTCGATTACGCGCAACAGCA
CGTGCGCGTGCTGTCGGGGCTGTATGGCCTGTTGCGTCCGCTCGATCTGTTGCAGCCGTACCGGCTCGAAATGGGCACGC
GCTTCGAGAACAGTCGCGGGAAGGATCTGTACGCATTCTGGGGTGCGCGCATCACGCAGGCGCTCAACCAGCAACTGGAA
AAAAAGAAGGGCGGCTCGCGCGTGCTGATCAATTGCGCGTCGACGGAATATTTCAAGTCGGTCAAGCCGAAGCAGCTCTC
GGCGCCCGTGATCACGCCCGTATTTGAAGACTGGAAGGGCGGCCGCTACAAGATCATCAGCTTTCACGCGAAACGCGCGC
GCGGCTTGATGGCGCGCTACCTGGTGGAAAATCGCTTCGACACGCCCGAACAGATGAAGGCATTCGATTCCGAAGGCTAT
GCATTCGACGCTCAGGCCTCGAACGACTCCACCTATGTCTTTCGTCGGCGCGTCGCAGACTGA

Upstream 100 bases:

>100_bases
CAGCAGGCGCGTTCTGTTCAGGCGAGGCAGGGGTTTCGGGCATTCGTTACAATCTGGCTTTCGTCTTTGACCGCCAGGCA
CGGCGTGCCTGAAAGCCTCT

Downstream 100 bases:

>100_bases
CGCCGCGCCGAACCAGCAGGAACATCAACATGACGCTATCCATTACGAGCAACTTCGACGCCGGCGCGATCGAAGTCCTG
TCCTGCGCGCAGGCCGACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MIIVLSPAKSLDYETPPHVKKHTIPDFVDDAAELIGGLRRLSPQDIASLMDISDQLAHLNFQRYADWSPTFDSSNSKQAV
LAFNGDVYEGFDAKSLSASDLDYAQQHVRVLSGLYGLLRPLDLLQPYRLEMGTRFENSRGKDLYAFWGARITQALNQQLE
KKKGGSRVLINCASTEYFKSVKPKQLSAPVITPVFEDWKGGRYKIISFHAKRARGLMARYLVENRFDTPEQMKAFDSEGY
AFDAQASNDSTYVFRRRVAD

Sequences:

>Translated_260_residues
MIIVLSPAKSLDYETPPHVKKHTIPDFVDDAAELIGGLRRLSPQDIASLMDISDQLAHLNFQRYADWSPTFDSSNSKQAV
LAFNGDVYEGFDAKSLSASDLDYAQQHVRVLSGLYGLLRPLDLLQPYRLEMGTRFENSRGKDLYAFWGARITQALNQQLE
KKKGGSRVLINCASTEYFKSVKPKQLSAPVITPVFEDWKGGRYKIISFHAKRARGLMARYLVENRFDTPEQMKAFDSEGY
AFDAQASNDSTYVFRRRVAD
>Mature_260_residues
MIIVLSPAKSLDYETPPHVKKHTIPDFVDDAAELIGGLRRLSPQDIASLMDISDQLAHLNFQRYADWSPTFDSSNSKQAV
LAFNGDVYEGFDAKSLSASDLDYAQQHVRVLSGLYGLLRPLDLLQPYRLEMGTRFENSRGKDLYAFWGARITQALNQQLE
KKKGGSRVLINCASTEYFKSVKPKQLSAPVITPVFEDWKGGRYKIISFHAKRARGLMARYLVENRFDTPEQMKAFDSEGY
AFDAQASNDSTYVFRRRVAD

Specific function: Unknown

COG id: COG3022

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0246 family

Homologues:

Organism=Escherichia coli, GI1786187, Length=256, Percent_Identity=55.859375, Blast_Score=313, Evalue=6e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1979_BURP8 (B2JDJ8)

Other databases:

- EMBL:   CP001043
- RefSeq:   YP_001858204.1
- GeneID:   6243468
- GenomeReviews:   CP001043_GR
- KEGG:   bph:Bphy_1979
- HOGENOM:   HBG672409
- OMA:   ISFYAKR
- ProtClustDB:   PRK02101
- HAMAP:   MF_00652
- InterPro:   IPR005583

Pfam domain/function: PF03883 DUF328

EC number: NA

Molecular weight: Translated: 29446; Mature: 29446

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIVLSPAKSLDYETPPHVKKHTIPDFVDDAAELIGGLRRLSPQDIASLMDISDQLAHLN
CEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
FQRYADWSPTFDSSNSKQAVLAFNGDVYEGFDAKSLSASDLDYAQQHVRVLSGLYGLLRP
HHHHCCCCCCCCCCCCCEEEEEECCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LDLLQPYRLEMGTRFENSRGKDLYAFWGARITQALNQQLEKKKGGSRVLINCASTEYFKS
HHHHCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHH
VKPKQLSAPVITPVFEDWKGGRYKIISFHAKRARGLMARYLVENRFDTPEQMKAFDSEGY
CCCCCCCCCCCCHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCC
AFDAQASNDSTYVFRRRVAD
EEECCCCCCCHHHHHHHCCC
>Mature Secondary Structure
MIIVLSPAKSLDYETPPHVKKHTIPDFVDDAAELIGGLRRLSPQDIASLMDISDQLAHLN
CEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
FQRYADWSPTFDSSNSKQAVLAFNGDVYEGFDAKSLSASDLDYAQQHVRVLSGLYGLLRP
HHHHCCCCCCCCCCCCCEEEEEECCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LDLLQPYRLEMGTRFENSRGKDLYAFWGARITQALNQQLEKKKGGSRVLINCASTEYFKS
HHHHCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHH
VKPKQLSAPVITPVFEDWKGGRYKIISFHAKRARGLMARYLVENRFDTPEQMKAFDSEGY
CCCCCCCCCCCCHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCC
AFDAQASNDSTYVFRRRVAD
EEECCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA