Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186476733

Identifier: 186476733

GI number: 186476733

Start: 2229191

End: 2230357

Strand: Reverse

Name: 186476733

Synonym: Bphy_1978

Alternate gene names: NA

Gene position: 2230357-2229191 (Counterclockwise)

Preceding gene: 186476734

Following gene: 186476728

Centisome position: 64.11

GC content: 61.7

Gene sequence:

>1167_bases
ATGACGCTATCCATTACGAGCAACTTCGACGCCGGCGCGATCGAAGTCCTGTCCTGCGCGCAGGCCGACAACATCCGTTT
GCGCGTGCGTCCGGACAGCCACGCGGACTTCGCGCAGTGGTTCTACTTCCGGCTGTCGGGTGGCCGAGGCGAGCGCTGCG
TCATGACCTTCGAGAACGCTGCCGACTGCGCATTCGCCGAAGGCTGGCGCGACTATCACGCCTGCGCGAGCTATGACCGT
GTGAACTGGTTCCGCGTGCCGACCTCGTACGACGGCCGCGTGCTGACCATCGATCACACGCCCGATTTCGACCGCGTCTA
CTACGCGTACTTCGAGCCATATAGCGAAGAGCGCCACTCGGAATTTCTCGGCGCAGTCCAACAGATGCCGCATGCTGCGC
TGACGGAACTAGGCAAGACGGTCGAAGGCCGGCCGATGTCGGTGTTGACCCTCGGCACGCCGACGCTGCGCGACGACGGT
ACGCTGAAGCCGAAGAAGAAAATCTGGATCATCGCGCGTCAACATCCCGGCGAGACGATGGCTGAGTGGTTCGTAGAAGG
GCTGGTGAAGCGGCTGGTGGGCTGGGGCGATTGGTCGGGCGATCCCGTTGCGCGCAGGCTCTACGATTACGCGGACTTCC
ACATCGTACCGAACATGAACCCGGACGGCAGCGTGCACGGCAATCTGCGCACGAATGCAGCGGGCGCGAATCTGAATCGA
GAATGGATGGAGCCGGATGCCGCACGTAGTCCTGAAGTGCTGCTCGTGCGCGACGCGATCCATGCGACGGGCTGCGATCT
GTTTTTCGACATTCATGGCGACGAAGCGCTGCCGTATGTGTTCGTTGCGGGCTCGGAGATGCTACCGAGCTTCACCGAGC
GGCAACGCGAGGAACAGACGGCGTTCATTGAGGGCTTCAAGCGCGCGAGTCCAGATTTCCAGGATAAGTACGGTTACGAA
TCGAGCAAGTATCGGCAAGATGCGCTCAAGCTGGCGTCGAAGTATATCGGCAACGAGTTCGGTTGCCTGTCGCTGACGCT
GGAGATGCCGTTCAAGGACAATGCAAATCTGCCCGACGAACGCATCGGCTGGAATGGCGAGCGCAGCGCGGCGCTCGGCG
CGGCGATGCTGCAGGCTATCCTCTGGCATATGGAGGCCTTCGCCTGA

Upstream 100 bases:

>100_bases
AAGGCTATGCATTCGACGCTCAGGCCTCGAACGACTCCACCTATGTCTTTCGTCGGCGCGTCGCAGACTGACGCCGCGCC
GAACCAGCAGGAACATCAAC

Downstream 100 bases:

>100_bases
GGCGCGTGTTGTGTCGACACGTTGACCAGTCGTCAAGGTATGCGAAAAAGCGAGGCCACGTGGAATGCGTGGCCTCGTTT
TGTTGATCATGCGCTGTGCC

Product: peptidase M14 carboxypeptidase A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MTLSITSNFDAGAIEVLSCAQADNIRLRVRPDSHADFAQWFYFRLSGGRGERCVMTFENAADCAFAEGWRDYHACASYDR
VNWFRVPTSYDGRVLTIDHTPDFDRVYYAYFEPYSEERHSEFLGAVQQMPHAALTELGKTVEGRPMSVLTLGTPTLRDDG
TLKPKKKIWIIARQHPGETMAEWFVEGLVKRLVGWGDWSGDPVARRLYDYADFHIVPNMNPDGSVHGNLRTNAAGANLNR
EWMEPDAARSPEVLLVRDAIHATGCDLFFDIHGDEALPYVFVAGSEMLPSFTERQREEQTAFIEGFKRASPDFQDKYGYE
SSKYRQDALKLASKYIGNEFGCLSLTLEMPFKDNANLPDERIGWNGERSAALGAAMLQAILWHMEAFA

Sequences:

>Translated_388_residues
MTLSITSNFDAGAIEVLSCAQADNIRLRVRPDSHADFAQWFYFRLSGGRGERCVMTFENAADCAFAEGWRDYHACASYDR
VNWFRVPTSYDGRVLTIDHTPDFDRVYYAYFEPYSEERHSEFLGAVQQMPHAALTELGKTVEGRPMSVLTLGTPTLRDDG
TLKPKKKIWIIARQHPGETMAEWFVEGLVKRLVGWGDWSGDPVARRLYDYADFHIVPNMNPDGSVHGNLRTNAAGANLNR
EWMEPDAARSPEVLLVRDAIHATGCDLFFDIHGDEALPYVFVAGSEMLPSFTERQREEQTAFIEGFKRASPDFQDKYGYE
SSKYRQDALKLASKYIGNEFGCLSLTLEMPFKDNANLPDERIGWNGERSAALGAAMLQAILWHMEAFA
>Mature_387_residues
TLSITSNFDAGAIEVLSCAQADNIRLRVRPDSHADFAQWFYFRLSGGRGERCVMTFENAADCAFAEGWRDYHACASYDRV
NWFRVPTSYDGRVLTIDHTPDFDRVYYAYFEPYSEERHSEFLGAVQQMPHAALTELGKTVEGRPMSVLTLGTPTLRDDGT
LKPKKKIWIIARQHPGETMAEWFVEGLVKRLVGWGDWSGDPVARRLYDYADFHIVPNMNPDGSVHGNLRTNAAGANLNRE
WMEPDAARSPEVLLVRDAIHATGCDLFFDIHGDEALPYVFVAGSEMLPSFTERQREEQTAFIEGFKRASPDFQDKYGYES
SKYRQDALKLASKYIGNEFGCLSLTLEMPFKDNANLPDERIGWNGERSAALGAAMLQAILWHMEAFA

Specific function: Unknown

COG id: COG2866

COG function: function code E; Predicted carboxypeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI190194403, Length=372, Percent_Identity=26.6129032258064, Blast_Score=106, Evalue=3e-23,
Organism=Homo sapiens, GI222352158, Length=315, Percent_Identity=25.3968253968254, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI120444924, Length=207, Percent_Identity=29.951690821256, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI31657119, Length=313, Percent_Identity=24.6006389776358, Blast_Score=83, Evalue=5e-16,
Organism=Homo sapiens, GI170763513, Length=333, Percent_Identity=23.1231231231231, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI115533904, Length=410, Percent_Identity=24.6341463414634, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI193202888, Length=329, Percent_Identity=26.7477203647416, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI24641847, Length=362, Percent_Identity=25.6906077348066, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI28571179, Length=362, Percent_Identity=25.6906077348066, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI161077807, Length=362, Percent_Identity=25.6906077348066, Blast_Score=99, Evalue=4e-21,
Organism=Drosophila melanogaster, GI24641845, Length=362, Percent_Identity=25.6906077348066, Blast_Score=99, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000834 [H]

Pfam domain/function: PF00246 Peptidase_M14 [H]

EC number: NA

Molecular weight: Translated: 43902; Mature: 43770

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLSITSNFDAGAIEVLSCAQADNIRLRVRPDSHADFAQWFYFRLSGGRGERCVMTFENA
CEEEEECCCCCCHHHHHHHCCCCCEEEEECCCCCCCHHEEEEEEECCCCCCEEEEEECCC
ADCAFAEGWRDYHACASYDRVNWFRVPTSYDGRVLTIDHTPDFDRVYYAYFEPYSEERHS
CCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEECCCCCCCCEEEEEECCCCHHHHH
EFLGAVQQMPHAALTELGKTVEGRPMSVLTLGTPTLRDDGTLKPKKKIWIIARQHPGETM
HHHHHHHHCCHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCHHH
AEWFVEGLVKRLVGWGDWSGDPVARRLYDYADFHIVPNMNPDGSVHGNLRTNAAGANLNR
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCEEEECCCCCCCCEECCEECCCCCCCCCH
EWMEPDAARSPEVLLVRDAIHATGCDLFFDIHGDEALPYVFVAGSEMLPSFTERQREEQT
HHCCCCCCCCCCEEEEECCHHHCCCEEEEEECCCCCCCEEEEECCHHCCHHHHHHHHHHH
AFIEGFKRASPDFQDKYGYESSKYRQDALKLASKYIGNEFGCLSLTLEMPFKDNANLPDE
HHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHH
RIGWNGERSAALGAAMLQAILWHMEAFA
HCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TLSITSNFDAGAIEVLSCAQADNIRLRVRPDSHADFAQWFYFRLSGGRGERCVMTFENA
EEEEECCCCCCHHHHHHHCCCCCEEEEECCCCCCCHHEEEEEEECCCCCCEEEEEECCC
ADCAFAEGWRDYHACASYDRVNWFRVPTSYDGRVLTIDHTPDFDRVYYAYFEPYSEERHS
CCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEECCCCCCCCEEEEEECCCCHHHHH
EFLGAVQQMPHAALTELGKTVEGRPMSVLTLGTPTLRDDGTLKPKKKIWIIARQHPGETM
HHHHHHHHCCHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCHHH
AEWFVEGLVKRLVGWGDWSGDPVARRLYDYADFHIVPNMNPDGSVHGNLRTNAAGANLNR
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCEEEECCCCCCCCEECCEECCCCCCCCCH
EWMEPDAARSPEVLLVRDAIHATGCDLFFDIHGDEALPYVFVAGSEMLPSFTERQREEQT
HHCCCCCCCCCCEEEEECCHHHCCCEEEEEECCCCCCCEEEEECCHHCCHHHHHHHHHHH
AFIEGFKRASPDFQDKYGYESSKYRQDALKLASKYIGNEFGCLSLTLEMPFKDNANLPDE
HHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHH
RIGWNGERSAALGAAMLQAILWHMEAFA
HCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8320209 [H]