| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476590
Identifier: 186476590
GI number: 186476590
Start: 2093793
End: 2095409
Strand: Reverse
Name: 186476590
Synonym: Bphy_1833
Alternate gene names: NA
Gene position: 2095409-2093793 (Counterclockwise)
Preceding gene: 186476591
Following gene: 186476589
Centisome position: 60.23
GC content: 64.87
Gene sequence:
>1617_bases ATGAAACCGTCACTGATGCGCCGCGCTGCGGACGCCGATGTCTGCCTGCTGCTAGAAGGCACGTTCCCGTTCGTGCGTGG CGGCGTGTCGAGCTGGGTCAACGAAATGCTCCGCTCGTATCCCGAACTGCGCTTTGCGATTGCGTTCATCGGCAGCCGCG AAGAGGACTACAACGGCGCCGCTTATGCGCTGCCCGACAACGTCGTGCATTTCGAAGCGCACTATCTGTATGAAGCGGGC GCCGCCGACGCTCAGGCCGTGCGCGAAATTCCCGGCGATGCCGACGCATTCGCGAAGTCGGCTGCGCTGCACGAGGCATG GCGCAACAAGGGCGAGGCCGACGCTGGCGCGATGATGGCCGACATGGTGCAACTGATCGGCGACAACGCGCCGCTGAGCG AAGAGCAGTTCCTGACGAGCCGGGCGGCGTGGGATTTCATCGTCGATCAATATCATCGCTACTGCACGGACCCGTCGTTC ACCGATTACTTCTGGACCGTGCGCATCATGCACAAGCCGCTGTGGCAGCTTGCGCGCGTCGCGCAGCAGTTGCCGCCCGC GAAGGTGTATCACACGGTGTCGACGGGCTATGCCGGTTTTCTCGGCGCGCTGCTGCACTACCGGACAGGCCGGCCCCTGC TCGTATCCGAGCATGGCATCTACACGAAAGAGCGCAAGATCGACCTGCTGCAAAGCCAGTGGATCCGCGACAACCGCGGC GCGTTCGAACGCGATATTTCGCGGATCAGCTACTTCCGCGAACTGTGGGTGCGCTTCTTCGAAGCGCTCGGCAAGCTCGC GTACGACGCCGCCGACGATATCGTCGCGCTGTATGAAGCGAACCGTCAGCGGCAGATCGCCGACGGCGCGCAAGCCGCGC GCACGCGCAACATTCCGAACGGCGTGGACGTGGACGCTCTCGCGCCGCTCATCGAGCAGCGGGTCGCGCGGCCGCGCAAT GTGGTCGCGCTGATCGGCCGCGTGGTGCCCATCAAGGACATCAAGACCTTCATTCGCGCGATATTCATCGCGTCGCGCGC GATGCCCGATATCGAAGGCTGGATCGTCGGTCCCGAGGAAGAAGATCCCGCGTACGCGCAGGAGTGCCGCGCGCTCGCCG AAAGTCTCGGTCTCGCGAAGAACGTCAGGTTCCTCGGCTTCCAGCGCATCCACGACATCTTGCCGAAGGTCGACGCGATC GCGCTGACGTCGATCAGCGAGGCGTTGCCGCTCGTCGTGCTCGAAGGTTTCGCGGCGGGCATTCCGTCGATCACGACGGA CGTCGGTTCATGCCGGCAACTGATCGAGGGCTACGGCGACGAGGACCGCGCACTGGGCGTAGCAGGCAGCGTCGTGCCGA TCGCGAACCCGGCTGCGTTCGCGCAGGCTGTGCTCGACCTGCTCGGCGACGAGCCGCGCTGGCGGGCTGCGCAGAAGGCG GGTATCGAACGTGTGCGGCGCTTCTATACGAAGGCGCAGATGACCGATCAATATCGCGTGCTGTATCAACGCCTGATGGC CGCGCCGTCGCGCGTCAAGGCGGCAGAAAGCGTGCAAGGCGGCTGTCCGATGCATACGGGCAGGGCGGCAGCGGCACAGA CGCGAGAGGTGCGCTGA
Upstream 100 bases:
>100_bases ATCTGCGCGGCGAGTACCCGCGCGTCTCCGAACTGCTCGCGTCGCTCGGCAATGCCGCGACGCTGCCGATGCTCAAACCT GTCGCGCGTTACTGGTCAAC
Downstream 100 bases:
>100_bases TGGCTGGCATTGGTTTCGAACTTCGCAAGATCCTCAAGCACCAGACGCTGCTTGGCGTTGCACGTGCCTACGCGTATGCA GGCCTGATCAGCTCGGGCCC
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: Group 1 Glycosyl Transferase; Glycosyl Transferase Group 1 Family Protein; Transferase; Lipopolysaccharide Biosynthesis Protein-Related Protein; Glycosyltransferase I; Glycosyl Transferase Group 1 Protein; Lipopolysaccharide Glycosyltransferase; Glycosyl Transferase Family Protein; Glycosyl Transferase; Lipopolysaccharide N-Acetylglucosaminyltransferase; LPS Biosynthesis Protein; Lipopolysaccharide Biosynthesis; Phosphatidylinositol Alpha-Mannosyltransferase; ABC Transporter Permease; Group Glycosyltransferase; Galactosyltransferase; Lipopolysaccharide Core Biosynthesis Glycosyltransferase; Lipopolysaccharide Biosynthesis Protein; Glycosyltransferase-Like Protein; Glycosyl Transferase Group 1 Family; Lipopolysaccharide N- Acetylglucosaminyltransferase; Lipopolysaccharide N-Acetylglucosaminyl Transferase; Group 1 Glycosyl Transferase Protein; Glycosyl Transferase GT4 Family Protein
Number of amino acids: Translated: 538; Mature: 538
Protein sequence:
>538_residues MKPSLMRRAADADVCLLLEGTFPFVRGGVSSWVNEMLRSYPELRFAIAFIGSREEDYNGAAYALPDNVVHFEAHYLYEAG AADAQAVREIPGDADAFAKSAALHEAWRNKGEADAGAMMADMVQLIGDNAPLSEEQFLTSRAAWDFIVDQYHRYCTDPSF TDYFWTVRIMHKPLWQLARVAQQLPPAKVYHTVSTGYAGFLGALLHYRTGRPLLVSEHGIYTKERKIDLLQSQWIRDNRG AFERDISRISYFRELWVRFFEALGKLAYDAADDIVALYEANRQRQIADGAQAARTRNIPNGVDVDALAPLIEQRVARPRN VVALIGRVVPIKDIKTFIRAIFIASRAMPDIEGWIVGPEEEDPAYAQECRALAESLGLAKNVRFLGFQRIHDILPKVDAI ALTSISEALPLVVLEGFAAGIPSITTDVGSCRQLIEGYGDEDRALGVAGSVVPIANPAAFAQAVLDLLGDEPRWRAAQKA GIERVRRFYTKAQMTDQYRVLYQRLMAAPSRVKAAESVQGGCPMHTGRAAAAQTREVR
Sequences:
>Translated_538_residues MKPSLMRRAADADVCLLLEGTFPFVRGGVSSWVNEMLRSYPELRFAIAFIGSREEDYNGAAYALPDNVVHFEAHYLYEAG AADAQAVREIPGDADAFAKSAALHEAWRNKGEADAGAMMADMVQLIGDNAPLSEEQFLTSRAAWDFIVDQYHRYCTDPSF TDYFWTVRIMHKPLWQLARVAQQLPPAKVYHTVSTGYAGFLGALLHYRTGRPLLVSEHGIYTKERKIDLLQSQWIRDNRG AFERDISRISYFRELWVRFFEALGKLAYDAADDIVALYEANRQRQIADGAQAARTRNIPNGVDVDALAPLIEQRVARPRN VVALIGRVVPIKDIKTFIRAIFIASRAMPDIEGWIVGPEEEDPAYAQECRALAESLGLAKNVRFLGFQRIHDILPKVDAI ALTSISEALPLVVLEGFAAGIPSITTDVGSCRQLIEGYGDEDRALGVAGSVVPIANPAAFAQAVLDLLGDEPRWRAAQKA GIERVRRFYTKAQMTDQYRVLYQRLMAAPSRVKAAESVQGGCPMHTGRAAAAQTREVR >Mature_538_residues MKPSLMRRAADADVCLLLEGTFPFVRGGVSSWVNEMLRSYPELRFAIAFIGSREEDYNGAAYALPDNVVHFEAHYLYEAG AADAQAVREIPGDADAFAKSAALHEAWRNKGEADAGAMMADMVQLIGDNAPLSEEQFLTSRAAWDFIVDQYHRYCTDPSF TDYFWTVRIMHKPLWQLARVAQQLPPAKVYHTVSTGYAGFLGALLHYRTGRPLLVSEHGIYTKERKIDLLQSQWIRDNRG AFERDISRISYFRELWVRFFEALGKLAYDAADDIVALYEANRQRQIADGAQAARTRNIPNGVDVDALAPLIEQRVARPRN VVALIGRVVPIKDIKTFIRAIFIASRAMPDIEGWIVGPEEEDPAYAQECRALAESLGLAKNVRFLGFQRIHDILPKVDAI ALTSISEALPLVVLEGFAAGIPSITTDVGSCRQLIEGYGDEDRALGVAGSVVPIANPAAFAQAVLDLLGDEPRWRAAQKA GIERVRRFYTKAQMTDQYRVLYQRLMAAPSRVKAAESVQGGCPMHTGRAAAAQTREVR
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59777; Mature: 59777
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPSLMRRAADADVCLLLEGTFPFVRGGVSSWVNEMLRSYPELRFAIAFIGSREEDYNGA CCCHHHHHHCCCCEEEEEECCCHHHHCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCC AYALPDNVVHFEAHYLYEAGAADAQAVREIPGDADAFAKSAALHEAWRNKGEADAGAMMA EEECCCCEEEEHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH DMVQLIGDNAPLSEEQFLTSRAAWDFIVDQYHRYCTDPSFTDYFWTVRIMHKPLWQLARV HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH AQQLPPAKVYHTVSTGYAGFLGALLHYRTGRPLLVSEHGIYTKERKIDLLQSQWIRDNRG HHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCC AFERDISRISYFRELWVRFFEALGKLAYDAADDIVALYEANRQRQIADGAQAARTRNIPN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC GVDVDALAPLIEQRVARPRNVVALIGRVVPIKDIKTFIRAIFIASRAMPDIEGWIVGPEE CCCHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCC EDPAYAQECRALAESLGLAKNVRFLGFQRIHDILPKVDAIALTSISEALPLVVLEGFAAG CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC IPSITTDVGSCRQLIEGYGDEDRALGVAGSVVPIANPAAFAQAVLDLLGDEPRWRAAQKA CCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH GIERVRRFYTKAQMTDQYRVLYQRLMAAPSRVKAAESVQGGCPMHTGRAAAAQTREVR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHCCCC >Mature Secondary Structure MKPSLMRRAADADVCLLLEGTFPFVRGGVSSWVNEMLRSYPELRFAIAFIGSREEDYNGA CCCHHHHHHCCCCEEEEEECCCHHHHCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCC AYALPDNVVHFEAHYLYEAGAADAQAVREIPGDADAFAKSAALHEAWRNKGEADAGAMMA EEECCCCEEEEHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH DMVQLIGDNAPLSEEQFLTSRAAWDFIVDQYHRYCTDPSFTDYFWTVRIMHKPLWQLARV HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH AQQLPPAKVYHTVSTGYAGFLGALLHYRTGRPLLVSEHGIYTKERKIDLLQSQWIRDNRG HHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCC AFERDISRISYFRELWVRFFEALGKLAYDAADDIVALYEANRQRQIADGAQAARTRNIPN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC GVDVDALAPLIEQRVARPRNVVALIGRVVPIKDIKTFIRAIFIASRAMPDIEGWIVGPEE CCCHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCC EDPAYAQECRALAESLGLAKNVRFLGFQRIHDILPKVDAIALTSISEALPLVVLEGFAAG CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC IPSITTDVGSCRQLIEGYGDEDRALGVAGSVVPIANPAAFAQAVLDLLGDEPRWRAAQKA CCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH GIERVRRFYTKAQMTDQYRVLYQRLMAAPSRVKAAESVQGGCPMHTGRAAAAQTREVR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA