Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186476591

Identifier: 186476591

GI number: 186476591

Start: 2095406

End: 2096455

Strand: Reverse

Name: 186476591

Synonym: Bphy_1834

Alternate gene names: NA

Gene position: 2096455-2095406 (Counterclockwise)

Preceding gene: 186476592

Following gene: 186476590

Centisome position: 60.26

GC content: 66.29

Gene sequence:

>1050_bases
ATGGATAACACCCAGGCAAACCGCCGGGCAGGCGGCTCCATCGCTTTCATGCTGTCGATGTTCGCGGCACCCGGCATCGC
CATCGTTGCATGCCTGCAGGGCGTGGGCATCGTGTATTTCGCGCAATGGCCGACGGGATACGATCCGCTCTTGCCCGTCA
TCGTGCTCGATGTCGTCTGTGGTGCGTTGCAGGCGCTGCTGGTCCGCCAGCTGCTGCCGCTGCGCTATCGGGAGCCGCGT
GCGTGGAGCCTGCTGCTGCTCGGACTCGCGTGCACCTTCGTGCCGTTGTTCGGCGGTCTGGTCGTGCTCGCGAGCTGCAT
CTGGGCGGCGCTCAGCCCGGCGTCGCATCCCGACGACGAAATGGGCGACGTGCCCGCACCGGAGTTCGTCACGTACCTGA
TGTCGCGTGTGTCGCATGGCGGCGGCGCGCGTCTTCAGGCTCGTCTGATCAACACCAGGGTCGCGGCGGCGGACAGGCTG
TCGGCGCTCGTCGCGATCCAGAGCATGCCGACGCGTACAACGGGCACGCTACTGCGCGATCTGCTGGCGGACCCCGTGGA
GGACGTGCGCCTGATTGCTTACGGCACGCTGGATCAAGCGGAAAACGACGTGATGCAGCGCATCTTCGATACGGCGAAGA
CGCTGGCGTCGGCGCCGTCGGACGACGATCGCCGCGCGCTCAACCGGCAGCTCGCCGAACTCTATTTCGAACTGATCTAT
CAGAACCTCGTGCAGGGAGCCGTATTCCGGCACACGCTCGAGCAGGCGGACCGCTATGCGCGCGCCGCGCTGGAGATCGA
CGACAGCGATGCCGCGCTGTGGATGATCCGCGGCCGCCTCGCGCTCACCAACGGCCACGCTGACGAAGCCGCGCGCTACA
TGGACCGTGCGCAATCGCTAGGATTCCCGCGCGAGCGTCTCGTGCCGTGGCTCGCCGAAGTCGAATATCTGCGCGGCGAG
TACCCGCGCGTCTCCGAACTGCTCGCGTCGCTCGGCAATGCCGCGACGCTGCCGATGCTCAAACCTGTCGCGCGTTACTG
GTCAACATGA

Upstream 100 bases:

>100_bases
CTCGACCTTGAAGGCGCGCGTATCGGCGTGCATACGCTGCATCTGGGCGGCGACGAGCCGGGTCCGGCGCTCAAGCGTCT
TCTCATGCGTAGCGGTCTCG

Downstream 100 bases:

>100_bases
AACCGTCACTGATGCGCCGCGCTGCGGACGCCGATGTCTGCCTGCTGCTAGAAGGCACGTTCCCGTTCGTGCGTGGCGGC
GTGTCGAGCTGGGTCAACGA

Product: putative transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MDNTQANRRAGGSIAFMLSMFAAPGIAIVACLQGVGIVYFAQWPTGYDPLLPVIVLDVVCGALQALLVRQLLPLRYREPR
AWSLLLLGLACTFVPLFGGLVVLASCIWAALSPASHPDDEMGDVPAPEFVTYLMSRVSHGGGARLQARLINTRVAAADRL
SALVAIQSMPTRTTGTLLRDLLADPVEDVRLIAYGTLDQAENDVMQRIFDTAKTLASAPSDDDRRALNRQLAELYFELIY
QNLVQGAVFRHTLEQADRYARAALEIDDSDAALWMIRGRLALTNGHADEAARYMDRAQSLGFPRERLVPWLAEVEYLRGE
YPRVSELLASLGNAATLPMLKPVARYWST

Sequences:

>Translated_349_residues
MDNTQANRRAGGSIAFMLSMFAAPGIAIVACLQGVGIVYFAQWPTGYDPLLPVIVLDVVCGALQALLVRQLLPLRYREPR
AWSLLLLGLACTFVPLFGGLVVLASCIWAALSPASHPDDEMGDVPAPEFVTYLMSRVSHGGGARLQARLINTRVAAADRL
SALVAIQSMPTRTTGTLLRDLLADPVEDVRLIAYGTLDQAENDVMQRIFDTAKTLASAPSDDDRRALNRQLAELYFELIY
QNLVQGAVFRHTLEQADRYARAALEIDDSDAALWMIRGRLALTNGHADEAARYMDRAQSLGFPRERLVPWLAEVEYLRGE
YPRVSELLASLGNAATLPMLKPVARYWST
>Mature_349_residues
MDNTQANRRAGGSIAFMLSMFAAPGIAIVACLQGVGIVYFAQWPTGYDPLLPVIVLDVVCGALQALLVRQLLPLRYREPR
AWSLLLLGLACTFVPLFGGLVVLASCIWAALSPASHPDDEMGDVPAPEFVTYLMSRVSHGGGARLQARLINTRVAAADRL
SALVAIQSMPTRTTGTLLRDLLADPVEDVRLIAYGTLDQAENDVMQRIFDTAKTLASAPSDDDRRALNRQLAELYFELIY
QNLVQGAVFRHTLEQADRYARAALEIDDSDAALWMIRGRLALTNGHADEAARYMDRAQSLGFPRERLVPWLAEVEYLRGE
YPRVSELLASLGNAATLPMLKPVARYWST

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38358; Mature: 38358

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNTQANRRAGGSIAFMLSMFAAPGIAIVACLQGVGIVYFAQWPTGYDPLLPVIVLDVVC
CCCCCCHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHH
GALQALLVRQLLPLRYREPRAWSLLLLGLACTFVPLFGGLVVLASCIWAALSPASHPDDE
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
MGDVPAPEFVTYLMSRVSHGGGARLQARLINTRVAAADRLSALVAIQSMPTRTTGTLLRD
CCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LLADPVEDVRLIAYGTLDQAENDVMQRIFDTAKTLASAPSDDDRRALNRQLAELYFELIY
HHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
QNLVQGAVFRHTLEQADRYARAALEIDDSDAALWMIRGRLALTNGHADEAARYMDRAQSL
HHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCEEECCCHHHHHHHHHHHHHC
GFPRERLVPWLAEVEYLRGEYPRVSELLASLGNAATLPMLKPVARYWST
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MDNTQANRRAGGSIAFMLSMFAAPGIAIVACLQGVGIVYFAQWPTGYDPLLPVIVLDVVC
CCCCCCHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHH
GALQALLVRQLLPLRYREPRAWSLLLLGLACTFVPLFGGLVVLASCIWAALSPASHPDDE
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
MGDVPAPEFVTYLMSRVSHGGGARLQARLINTRVAAADRLSALVAIQSMPTRTTGTLLRD
CCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
LLADPVEDVRLIAYGTLDQAENDVMQRIFDTAKTLASAPSDDDRRALNRQLAELYFELIY
HHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
QNLVQGAVFRHTLEQADRYARAALEIDDSDAALWMIRGRLALTNGHADEAARYMDRAQSL
HHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCEEECCCHHHHHHHHHHHHHC
GFPRERLVPWLAEVEYLRGEYPRVSELLASLGNAATLPMLKPVARYWST
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA