| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476558
Identifier: 186476558
GI number: 186476558
Start: 2058160
End: 2058621
Strand: Direct
Name: 186476558
Synonym: Bphy_1800
Alternate gene names: NA
Gene position: 2058160-2058621 (Clockwise)
Preceding gene: 186476557
Following gene: 186476561
Centisome position: 59.16
GC content: 56.49
Gene sequence:
>462_bases ATGGACGGCACAATCCGCAGCGAACGTGAAGAGCAGTTTGAAGAGTTATGCATCAGCGTCGACGCAGACGAGGCGCATGA GCAGGAAGCGATCGAATTCTTCGAAGCGCAATTCGGCGAAGCGGACTTCGACGCCGCGCAATGGCTCGATATTGCGCTCT ACTATTCGCCCGCTGTAGCACGAGGCATCATCGATATGGTGACGCCCGATGACAAGGCGCGTAGCAATATCGCCGTCGTG ATTGGCGATAACCTCGATATTTCGTATGGCGAAGACGAGTGTCAGCAGTTTGCTGAGACTATTCAGTTTGCGATCGCCAA TGGGGTGCCTGTTGATCTTGATGTCGTGCTCGACGGGTGTCAGCGGGCCATTGACGACCTCGACACCTGGGCCGAGGATG AAGTCAAGGAACCACTGCTGCGGTTGCGGGAGGAACTGCTGCGGCTGCATGGGGAGCAGTAG
Upstream 100 bases:
>100_bases ATGTTGCACGTGCCTGTCAGCCTGACGTCCTATAATGCCTGCCGCGCGAACTTTGCGCGGCGTTTTAATGGCATGGGCAA CACAGGCAAAAGAGGCACGA
Downstream 100 bases:
>100_bases GTCTGTTGTTGTGTCGTGTTGCGCTCTTTCACCGACATCCTCGGTCTTGGTTTTGAGTGCTGCGCTGGCATCCGCGAAGA AAAAACCGGCAACGCCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MDGTIRSEREEQFEELCISVDADEAHEQEAIEFFEAQFGEADFDAAQWLDIALYYSPAVARGIIDMVTPDDKARSNIAVV IGDNLDISYGEDECQQFAETIQFAIANGVPVDLDVVLDGCQRAIDDLDTWAEDEVKEPLLRLREELLRLHGEQ
Sequences:
>Translated_153_residues MDGTIRSEREEQFEELCISVDADEAHEQEAIEFFEAQFGEADFDAAQWLDIALYYSPAVARGIIDMVTPDDKARSNIAVV IGDNLDISYGEDECQQFAETIQFAIANGVPVDLDVVLDGCQRAIDDLDTWAEDEVKEPLLRLREELLRLHGEQ >Mature_153_residues MDGTIRSEREEQFEELCISVDADEAHEQEAIEFFEAQFGEADFDAAQWLDIALYYSPAVARGIIDMVTPDDKARSNIAVV IGDNLDISYGEDECQQFAETIQFAIANGVPVDLDVVLDGCQRAIDDLDTWAEDEVKEPLLRLREELLRLHGEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17240; Mature: 17240
Theoretical pI: Translated: 3.67; Mature: 3.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGTIRSEREEQFEELCISVDADEAHEQEAIEFFEAQFGEADFDAAQWLDIALYYSPAVA CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH RGIIDMVTPDDKARSNIAVVIGDNLDISYGEDECQQFAETIQFAIANGVPVDLDVVLDGC HHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH QRAIDDLDTWAEDEVKEPLLRLREELLRLHGEQ HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDGTIRSEREEQFEELCISVDADEAHEQEAIEFFEAQFGEADFDAAQWLDIALYYSPAVA CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH RGIIDMVTPDDKARSNIAVVIGDNLDISYGEDECQQFAETIQFAIANGVPVDLDVVLDGC HHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH QRAIDDLDTWAEDEVKEPLLRLREELLRLHGEQ HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA