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The map label for this gene is rssA [H]

Identifier: 186476551

GI number: 186476551

Start: 2048401

End: 2049432

Strand: Reverse

Name: rssA [H]

Synonym: Bphy_1793

Alternate gene names: 186476551

Gene position: 2049432-2048401 (Counterclockwise)

Preceding gene: 186476552

Following gene: 186476549

Centisome position: 58.91

GC content: 69.57

Gene sequence:

>1032_bases
ATGGCCATTCGTCGGCGCTACAAGCGCATCGGCCTCGTGCTCGGCGGGGGCGCCGCGCGCGGCTGGGCGCACATCGGCGC
AATTCGGGCATTGCACGAGGCGGGCATCAAGCCGGATATCGTCGCGGGCACGTCGATCGGCGCGCTGGTCGGCGCCGTCT
ATGCGAATGGCGATCTCGACTGGCTGGAAGATTGGGTGACGCGGCTCACGTGGCAATCGGTGGTGCGCCTGCTCGACCTG
CGCCTGTCGGGCGGACTGCTCGGCGGCAAGAAAGTCATCCAGGTGTTTGCGAACCGCTTCAACGGCTGTGCGATCGACGA
ATTGCGGATGCCGTTCGCGGCCGTCGCGACGGAGCTCGATTCCGGCCGCGAAACCTGGCTGCAGGACGGCGGCGTGGTGG
ATGCCGTGCGCGCATCCATTGCGATTCCGGGTCTGTTCACGCCGGTGCTGCGCGAAGGCGTGTGGCTCGTCGACGGCGGG
CTGTCGAATCCCGTGCCCGTGTCGGCCGCGCGCGGCATGCGGGCCGACTGCGTGATCGCCGTCGATCTCAACAACGATAT
TCTCAATGGCCGCGATTTCGGCGGCGCGGTGGTCGATCTGCCGCCGTTGCCGGCGGAAGAACTCGTCGAGGCCGCGGTCG
AGGCGTCCGAGTCGCTGACGCTCGATCCCGACGCGCCGCCGCCCGCGCTCGCGACGCCTGAGCCGCCGATGCTGCTGCGG
CGCAACGGCAAACCCTTTCCGGGCTGGCTGCAGCCTTCGCCGGAAGAGTATTCACGCGATGTGCGCGTGCCGCCCGCGCC
GAGCGCGCGCGTGCCGTCGATGCTCACGTCGGTCGCGCAGAGCATCGACATCATGCAAGTGCGGATTACGCGCAGCCGCC
TCGCGGGCGAGCCCGCCGACATCCTGATCCAGCCGCGCCTGGGCGGCATGGGCATTTTCGATTTTCACCGCGCGGAGCCG
GCCATCGCGGAAGGGCGCGCGGCCGTCGAGGCGATGCTGCCCGCCATCCGCGCGTGCCTCGGCACCGACTGA

Upstream 100 bases:

>100_bases
GGCGGGCGTGGCGGGCGCAAAGCCTGCAAACGCCCGTAAAACAAAAGTCCGCCGCGCGAGTCCAATCAGAAAACGCCTGC
AAACAAGGGAGAAAACAACA

Downstream 100 bases:

>100_bases
CTCACGCGATCGGTACAGCGCGTTCCGCGCTCAGAGCCCGCCGCCCTTCGCCGCGATAATGCGGCACACGCGCTTGCCGG
AACTTGCGCTCGTCGTGTCG

Product: patatin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 342

Protein sequence:

>343_residues
MAIRRRYKRIGLVLGGGAARGWAHIGAIRALHEAGIKPDIVAGTSIGALVGAVYANGDLDWLEDWVTRLTWQSVVRLLDL
RLSGGLLGGKKVIQVFANRFNGCAIDELRMPFAAVATELDSGRETWLQDGGVVDAVRASIAIPGLFTPVLREGVWLVDGG
LSNPVPVSAARGMRADCVIAVDLNNDILNGRDFGGAVVDLPPLPAEELVEAAVEASESLTLDPDAPPPALATPEPPMLLR
RNGKPFPGWLQPSPEEYSRDVRVPPAPSARVPSMLTSVAQSIDIMQVRITRSRLAGEPADILIQPRLGGMGIFDFHRAEP
AIAEGRAAVEAMLPAIRACLGTD

Sequences:

>Translated_343_residues
MAIRRRYKRIGLVLGGGAARGWAHIGAIRALHEAGIKPDIVAGTSIGALVGAVYANGDLDWLEDWVTRLTWQSVVRLLDL
RLSGGLLGGKKVIQVFANRFNGCAIDELRMPFAAVATELDSGRETWLQDGGVVDAVRASIAIPGLFTPVLREGVWLVDGG
LSNPVPVSAARGMRADCVIAVDLNNDILNGRDFGGAVVDLPPLPAEELVEAAVEASESLTLDPDAPPPALATPEPPMLLR
RNGKPFPGWLQPSPEEYSRDVRVPPAPSARVPSMLTSVAQSIDIMQVRITRSRLAGEPADILIQPRLGGMGIFDFHRAEP
AIAEGRAAVEAMLPAIRACLGTD
>Mature_342_residues
AIRRRYKRIGLVLGGGAARGWAHIGAIRALHEAGIKPDIVAGTSIGALVGAVYANGDLDWLEDWVTRLTWQSVVRLLDLR
LSGGLLGGKKVIQVFANRFNGCAIDELRMPFAAVATELDSGRETWLQDGGVVDAVRASIAIPGLFTPVLREGVWLVDGGL
SNPVPVSAARGMRADCVIAVDLNNDILNGRDFGGAVVDLPPLPAEELVEAAVEASESLTLDPDAPPPALATPEPPMLLRR
NGKPFPGWLQPSPEEYSRDVRVPPAPSARVPSMLTSVAQSIDIMQVRITRSRLAGEPADILIQPRLGGMGIFDFHRAEPA
IAEGRAAVEAMLPAIRACLGTD

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656039, Length=186, Percent_Identity=35.4838709677419, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI260656041, Length=186, Percent_Identity=35.4838709677419, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI116256487, Length=186, Percent_Identity=35.4838709677419, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI260656037, Length=186, Percent_Identity=35.4838709677419, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI260656043, Length=186, Percent_Identity=35.4838709677419, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI148727290, Length=197, Percent_Identity=32.994923857868, Blast_Score=95, Evalue=9e-20,
Organism=Homo sapiens, GI148727335, Length=197, Percent_Identity=32.994923857868, Blast_Score=95, Evalue=1e-19,
Organism=Escherichia coli, GI226510936, Length=338, Percent_Identity=39.6449704142012, Blast_Score=213, Evalue=2e-56,
Organism=Caenorhabditis elegans, GI193204778, Length=199, Percent_Identity=34.1708542713568, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI71997299, Length=181, Percent_Identity=29.8342541436464, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71997289, Length=181, Percent_Identity=29.8342541436464, Blast_Score=70, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6323581, Length=191, Percent_Identity=28.7958115183246, Blast_Score=84, Evalue=4e-17,
Organism=Drosophila melanogaster, GI281376913, Length=199, Percent_Identity=33.6683417085427, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI28571388, Length=199, Percent_Identity=32.1608040201005, Blast_Score=80, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 36482; Mature: 36350

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIRRRYKRIGLVLGGGAARGWAHIGAIRALHEAGIKPDIVAGTSIGALVGAVYANGDLD
CCHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHCCCCHH
WLEDWVTRLTWQSVVRLLDLRLSGGLLGGKKVIQVFANRFNGCAIDELRMPFAAVATELD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHC
SGRETWLQDGGVVDAVRASIAIPGLFTPVLREGVWLVDGGLSNPVPVSAARGMRADCVIA
CCHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCEEEEECCCCCCCCCHHHCCCCCCEEEE
VDLNNDILNGRDFGGAVVDLPPLPAEELVEAAVEASESLTLDPDAPPPALATPEPPMLLR
EECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHEE
RNGKPFPGWLQPSPEEYSRDVRVPPAPSARVPSMLTSVAQSIDIMQVRITRSRLAGEPAD
CCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEHHHHHCCCCCC
ILIQPRLGGMGIFDFHRAEPAIAEGRAAVEAMLPAIRACLGTD
EEEECCCCCCCEEHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AIRRRYKRIGLVLGGGAARGWAHIGAIRALHEAGIKPDIVAGTSIGALVGAVYANGDLD
CHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHCCCCHH
WLEDWVTRLTWQSVVRLLDLRLSGGLLGGKKVIQVFANRFNGCAIDELRMPFAAVATELD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHC
SGRETWLQDGGVVDAVRASIAIPGLFTPVLREGVWLVDGGLSNPVPVSAARGMRADCVIA
CCHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCEEEEECCCCCCCCCHHHCCCCCCEEEE
VDLNNDILNGRDFGGAVVDLPPLPAEELVEAAVEASESLTLDPDAPPPALATPEPPMLLR
EECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHEE
RNGKPFPGWLQPSPEEYSRDVRVPPAPSARVPSMLTSVAQSIDIMQVRITRSRLAGEPAD
CCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEHHHHHCCCCCC
ILIQPRLGGMGIFDFHRAEPAIAEGRAAVEAMLPAIRACLGTD
EEEECCCCCCCEEHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8282700; 9097039; 8905232; 9278503 [H]