Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186476552

Identifier: 186476552

GI number: 186476552

Start: 2049550

End: 2050131

Strand: Reverse

Name: 186476552

Synonym: Bphy_1794

Alternate gene names: NA

Gene position: 2050131-2049550 (Counterclockwise)

Preceding gene: 186476554

Following gene: 186476551

Centisome position: 58.93

GC content: 59.79

Gene sequence:

>582_bases
ATGTCATCGAAGATGATTACTCGCACCTCGTTGCGCAACTTGATGCTTTCCGTGGCTGTGGTGGGCGCGTTGTCCGCGCT
TGCCGGCTGCGACGACCAGCAGAGCGAGCAAGCCGTGCAAAAACTCAAGGAATTTTTCAACACCGTCAAACCGGATGCGC
TGCTTCTCAAAGGCCTGACGCCTGGCGTCACCACGCAAGCGCAAATCCGCGAACAGATGGGCAAGCCTGAAACGGAGCGC
ACGTTCACCGACGGCTCGAAGCGGTTCGAATATCCGCGCGGCCCGCAAGGCCTCAACACGTACATGGTGGACATCGGCCC
GGACGGCATCTTGCTGTCGATCACGCAGGTGCTGACGGCCGCGAACTTCGCGAAGATCCGCCCCGGCATGACGGAAGACG
AGGTACGGCGTCTGCTGGGTAAACCAGGTGAGGTGGCCGTCTATCCGCTCAAGCCCGAAACTGTGTGGAGCTGGAAGTGG
CGCGAAGGCGGCGTCACGCAAGAGGGTTTCTTCAATGTGCATTTCGACGCCAATCACGTCGTCTACACGACCTCTCGCTC
GGATGTGATTCGCGGGCATTGA

Upstream 100 bases:

>100_bases
AGCAATTCTTTAACTTTCCACACACATCCGCACGACGTTCCCACGCGAACGGGCCGCCGCACAGGTTATGCTCTGTGTCG
TCCATACGTTTGTGTTCCGC

Downstream 100 bases:

>100_bases
GCGCACGCGGCCGGACAGGCGGGCGTGGCGGGCGCAAAGCCTGCAAACGCCCGTAAAACAAAAGTCCGCCGCGCGAGTCC
AATCAGAAAACGCCTGCAAA

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MSSKMITRTSLRNLMLSVAVVGALSALAGCDDQQSEQAVQKLKEFFNTVKPDALLLKGLTPGVTTQAQIREQMGKPETER
TFTDGSKRFEYPRGPQGLNTYMVDIGPDGILLSITQVLTAANFAKIRPGMTEDEVRRLLGKPGEVAVYPLKPETVWSWKW
REGGVTQEGFFNVHFDANHVVYTTSRSDVIRGH

Sequences:

>Translated_193_residues
MSSKMITRTSLRNLMLSVAVVGALSALAGCDDQQSEQAVQKLKEFFNTVKPDALLLKGLTPGVTTQAQIREQMGKPETER
TFTDGSKRFEYPRGPQGLNTYMVDIGPDGILLSITQVLTAANFAKIRPGMTEDEVRRLLGKPGEVAVYPLKPETVWSWKW
REGGVTQEGFFNVHFDANHVVYTTSRSDVIRGH
>Mature_192_residues
SSKMITRTSLRNLMLSVAVVGALSALAGCDDQQSEQAVQKLKEFFNTVKPDALLLKGLTPGVTTQAQIREQMGKPETERT
FTDGSKRFEYPRGPQGLNTYMVDIGPDGILLSITQVLTAANFAKIRPGMTEDEVRRLLGKPGEVAVYPLKPETVWSWKWR
EGGVTQEGFFNVHFDANHVVYTTSRSDVIRGH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21416; Mature: 21285

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSKMITRTSLRNLMLSVAVVGALSALAGCDDQQSEQAVQKLKEFFNTVKPDALLLKGLT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCC
PGVTTQAQIREQMGKPETERTFTDGSKRFEYPRGPQGLNTYMVDIGPDGILLSITQVLTA
CCCCCHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHH
ANFAKIRPGMTEDEVRRLLGKPGEVAVYPLKPETVWSWKWREGGVTQEGFFNVHFDANHV
HHHHHCCCCCCHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCEE
VYTTSRSDVIRGH
EEECCCCCCCCCC
>Mature Secondary Structure 
SSKMITRTSLRNLMLSVAVVGALSALAGCDDQQSEQAVQKLKEFFNTVKPDALLLKGLT
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCC
PGVTTQAQIREQMGKPETERTFTDGSKRFEYPRGPQGLNTYMVDIGPDGILLSITQVLTA
CCCCCHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHH
ANFAKIRPGMTEDEVRRLLGKPGEVAVYPLKPETVWSWKWREGGVTQEGFFNVHFDANHV
HHHHHCCCCCCHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCEE
VYTTSRSDVIRGH
EEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA