| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476536
Identifier: 186476536
GI number: 186476536
Start: 2031599
End: 2033056
Strand: Direct
Name: 186476536
Synonym: Bphy_1778
Alternate gene names: NA
Gene position: 2031599-2033056 (Clockwise)
Preceding gene: 186476535
Following gene: 186476550
Centisome position: 58.39
GC content: 64.06
Gene sequence:
>1458_bases ATGCTAAAGGCTGCGCTGCTTGACCGGCTCTGGGGTCGCATGAACGAGCGCGGTGACTTTCCGATGCTGCAGCAGTCGCT CCGCACGACGATGGCCGCGATGAGCAACGACGACCTCGATTTCAGCGGGCTCGTGCAGATTGTGCTTTCCGACTTCGCGC TGACCCAGAAGGTGCTGCGTCTCGCGAATTCGGCGATGTACATGGCGTTCGGCGGCAACATCACGACCGTGTCGCGCGCG CTGATGGTGCTCGGCATGGATGCCGTCGGGCATCTCGTCGTCGGCCTGAAGATCGTCGATCACTTTCATCACAGCGCGCC GCGCCGTATCGACGCGAAGCTCGAACTCAACCGGACCATGCTGTCCGGCTGCGTCGCGCGCAAGCTCACCGAGCGCGGCG ACCTGCGCGAGGGCGAAGAGGCCGTCGTCTGCACGCTGATGCGGCAGATCGGCAAGCTGCTGGTCGTGTTCTACCTCGAT GCCGAGTGGGACCAGATTCGCCGCCAGGTCGATACGGGCATGGGCGAGAACGAAGCATGCGAAAGCGTGCTCGGCGTGAC GTTCGAGGAAATCGGCCTGGAAGCGGCCACACGCTGGCGTCTGCCCGCGCTGATCCGTGTCGGCATGACCGAGTTCGATC CGCTGCAGAATGACGAGCCGCGCCAGGTGCAATGGCTGCGCGCAATCACGAACTACTCGACGGAAGTGGCGAACGTGCTG ACACAGCCGCATCTGCCCGAGTCGCAGCGCGACGTGCGCATCGCGGAACTCGCGCAGCGCTACAGCCGCACGCTCAACAG CGATCCCGACGTGCTCGTCGACATGAGCCTCACGCTCGCCGAAGAAGAGACCCGCGATGGCGTGATGCGCGAGATCTTCG AACTGCGCGCGAACGCCGATGCGATTGCGCGCGAGTCACTCGACCCCGAATCGTGCATCCGCGCAGGGGTCGGCGAATTG CAGGCGTTGCCGAGCGACAGCGGACTCGCGCCTGCGCTCGCAATGGCCTCCGAGACGGTGCTCGCGGGTCTGCAGTTCGA GCGCACCGTGGTGTTCGTGCGGCACGGCAGCGGTATCTTCAAGGCATCGATGGGTTTCGGCGCGAAGATCGACGCGGCGC TGCCCAAGCTCAGCTTCGCGACGGCGTTCGAACCCGACGTGTTTCATCTTGCGATCGCGAACTCGGTCGGCATCTTTATC GAGAACGCACGCGATCCGAAAATGCATGCGCGACTGCCGCAGTGGTATCGCCGTGCCTTCGACGGCGTGCATTCGTTCGT GCTGTTGCCCGTGGTGCTCGAGAACAAGTCGACGGTTGCCCTGCTCTACGGCGACTGGGCGCATCACGATGTGCCGCGCC GCATCTCGCAGCGGGAAATGGCCGCGCTCAATGAACTCGCGCGTGAATTGGGCCGGTTCTTCGCGTATGCGCCCGTGAGC GAACTAGAAACGCTTTGA
Upstream 100 bases:
>100_bases TCGCGCGCGCTTCATGTGCATGGTGAAGCGTGACCGACTCGACGCGTAGCGAAACCGTAGTGCCACTCACTGGAAACTGT ATGCCTCTTGCGGGACTCTC
Downstream 100 bases:
>100_bases TGCCCGGCGCGGGCTGAACGCCATGCGCCCTCTTCCGTCGACCGCGCGGCTCAGGTTGTCGAACCGCGCGGCATCTGGCG TTAGTCCTCGATACGCTCCA
Product: putative signal transduction protein
Products: NA
Alternate protein names: Serine/Threonine Protein Kinase; Metal Dependent Phosphohydrolase; Protein KinaseGAF; GAF-Domain-Containing Protein; HDIG Domain Protein; HDOD Domain Family
Number of amino acids: Translated: 485; Mature: 485
Protein sequence:
>485_residues MLKAALLDRLWGRMNERGDFPMLQQSLRTTMAAMSNDDLDFSGLVQIVLSDFALTQKVLRLANSAMYMAFGGNITTVSRA LMVLGMDAVGHLVVGLKIVDHFHHSAPRRIDAKLELNRTMLSGCVARKLTERGDLREGEEAVVCTLMRQIGKLLVVFYLD AEWDQIRRQVDTGMGENEACESVLGVTFEEIGLEAATRWRLPALIRVGMTEFDPLQNDEPRQVQWLRAITNYSTEVANVL TQPHLPESQRDVRIAELAQRYSRTLNSDPDVLVDMSLTLAEEETRDGVMREIFELRANADAIARESLDPESCIRAGVGEL QALPSDSGLAPALAMASETVLAGLQFERTVVFVRHGSGIFKASMGFGAKIDAALPKLSFATAFEPDVFHLAIANSVGIFI ENARDPKMHARLPQWYRRAFDGVHSFVLLPVVLENKSTVALLYGDWAHHDVPRRISQREMAALNELARELGRFFAYAPVS ELETL
Sequences:
>Translated_485_residues MLKAALLDRLWGRMNERGDFPMLQQSLRTTMAAMSNDDLDFSGLVQIVLSDFALTQKVLRLANSAMYMAFGGNITTVSRA LMVLGMDAVGHLVVGLKIVDHFHHSAPRRIDAKLELNRTMLSGCVARKLTERGDLREGEEAVVCTLMRQIGKLLVVFYLD AEWDQIRRQVDTGMGENEACESVLGVTFEEIGLEAATRWRLPALIRVGMTEFDPLQNDEPRQVQWLRAITNYSTEVANVL TQPHLPESQRDVRIAELAQRYSRTLNSDPDVLVDMSLTLAEEETRDGVMREIFELRANADAIARESLDPESCIRAGVGEL QALPSDSGLAPALAMASETVLAGLQFERTVVFVRHGSGIFKASMGFGAKIDAALPKLSFATAFEPDVFHLAIANSVGIFI ENARDPKMHARLPQWYRRAFDGVHSFVLLPVVLENKSTVALLYGDWAHHDVPRRISQREMAALNELARELGRFFAYAPVS ELETL >Mature_485_residues MLKAALLDRLWGRMNERGDFPMLQQSLRTTMAAMSNDDLDFSGLVQIVLSDFALTQKVLRLANSAMYMAFGGNITTVSRA LMVLGMDAVGHLVVGLKIVDHFHHSAPRRIDAKLELNRTMLSGCVARKLTERGDLREGEEAVVCTLMRQIGKLLVVFYLD AEWDQIRRQVDTGMGENEACESVLGVTFEEIGLEAATRWRLPALIRVGMTEFDPLQNDEPRQVQWLRAITNYSTEVANVL TQPHLPESQRDVRIAELAQRYSRTLNSDPDVLVDMSLTLAEEETRDGVMREIFELRANADAIARESLDPESCIRAGVGEL QALPSDSGLAPALAMASETVLAGLQFERTVVFVRHGSGIFKASMGFGAKIDAALPKLSFATAFEPDVFHLAIANSVGIFI ENARDPKMHARLPQWYRRAFDGVHSFVLLPVVLENKSTVALLYGDWAHHDVPRRISQREMAALNELARELGRFFAYAPVS ELETL
Specific function: Unknown
COG id: COG1639
COG function: function code T; Predicted signal transduction protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54025; Mature: 54025
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKAALLDRLWGRMNERGDFPMLQQSLRTTMAAMSNDDLDFSGLVQIVLSDFALTQKVLR CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH LANSAMYMAFGGNITTVSRALMVLGMDAVGHLVVGLKIVDHFHHSAPRRIDAKLELNRTM HHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH LSGCVARKLTERGDLREGEEAVVCTLMRQIGKLLVVFYLDAEWDQIRRQVDTGMGENEAC HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHCCCCCHHHH ESVLGVTFEEIGLEAATRWRLPALIRVGMTEFDPLQNDEPRQVQWLRAITNYSTEVANVL HHHHCCCHHHHCCHHHHHHCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH TQPHLPESQRDVRIAELAQRYSRTLNSDPDVLVDMSLTLAEEETRDGVMREIFELRANAD CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCH AIARESLDPESCIRAGVGELQALPSDSGLAPALAMASETVLAGLQFERTVVFVRHGSGIF HHHHCCCCHHHHHHHCHHHHHCCCCCCCCCHHHHHHHHHHHHCCEEEEEEEEEEECCCEE KASMGFGAKIDAALPKLSFATAFEPDVFHLAIANSVGIFIENARDPKMHARLPQWYRRAF EECCCCCCCHHHHCCCCHHHCCCCCCCEEEEECCCCEEEEECCCCCHHHHHCHHHHHHHH DGVHSFVLLPVVLENKSTVALLYGDWAHHDVPRRISQREMAALNELARELGRFFAYAPVS HHHHHHHHHHHEECCCCEEEEEECCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH ELETL HHCCC >Mature Secondary Structure MLKAALLDRLWGRMNERGDFPMLQQSLRTTMAAMSNDDLDFSGLVQIVLSDFALTQKVLR CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH LANSAMYMAFGGNITTVSRALMVLGMDAVGHLVVGLKIVDHFHHSAPRRIDAKLELNRTM HHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH LSGCVARKLTERGDLREGEEAVVCTLMRQIGKLLVVFYLDAEWDQIRRQVDTGMGENEAC HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHCCCCCHHHH ESVLGVTFEEIGLEAATRWRLPALIRVGMTEFDPLQNDEPRQVQWLRAITNYSTEVANVL HHHHCCCHHHHCCHHHHHHCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH TQPHLPESQRDVRIAELAQRYSRTLNSDPDVLVDMSLTLAEEETRDGVMREIFELRANAD CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCH AIARESLDPESCIRAGVGELQALPSDSGLAPALAMASETVLAGLQFERTVVFVRHGSGIF HHHHCCCCHHHHHHHCHHHHHCCCCCCCCCHHHHHHHHHHHHCCEEEEEEEEEEECCCEE KASMGFGAKIDAALPKLSFATAFEPDVFHLAIANSVGIFIENARDPKMHARLPQWYRRAF EECCCCCCCHHHHCCCCHHHCCCCCCCEEEEECCCCEEEEECCCCCHHHHHCHHHHHHHH DGVHSFVLLPVVLENKSTVALLYGDWAHHDVPRRISQREMAALNELARELGRFFAYAPVS HHHHHHHHHHHEECCCCEEEEEECCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH ELETL HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA