| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476526
Identifier: 186476526
GI number: 186476526
Start: 2016399
End: 2016845
Strand: Direct
Name: 186476526
Synonym: Bphy_1768
Alternate gene names: NA
Gene position: 2016399-2016845 (Clockwise)
Preceding gene: 186476522
Following gene: 186476527
Centisome position: 57.96
GC content: 61.97
Gene sequence:
>447_bases ATGAACCAGGCAGGTACCGGCGCAGGGATCGTCGGCGGTGGCGTGGGCGAAGGTCCGGGGCCTGAAGTGATGGCCGCGGC AACGCTGGATGGCAACAAGGTCATCTCGTCGGATGGAGAACATGTCGGCAAGATTTCGGACATCATGCTCGACGTGCGCA GCGGACGCATCGCGTATGCAGTGCTGTCCGAGGGCGGCTTCCTCGGCATGGGCAGCAATCTGCACGCGATCCCGTGGAGC GCGTTGACACTCGATACCGACGAGAAGGTGTTCCGCGTCGATATCACTGCGCAACGTATCAAGGACGAACCGGGCTTCGA CAAGGATCACTGGCCATCCATGGCCGATGAGACCTGGGGTACGCAGATGCATCAGTACTACAACCGCGACCCGTACTGGA TGTCGAGTTCGGTCGATCCCGACGTCACGCGCGGCCGGGAGCTCTGA
Upstream 100 bases:
>100_bases CCGACGCGACGCCCGACGAAAACGTCCACAGGCACGCGGGATGCGCATCCGCATCCGTGGACTTCCAAAGGAGGAAATCA TGACCACACTTGACCCGAAA
Downstream 100 bases:
>100_bases TGTCGAGTGCGGTACACACGCCGGCGTAGCGCTGCCGGCTTTTCCTTCCTAGACGCTCATGCCGGCGGCCGTCACTTTCT GACGGCCGCCGCGCTTCGTT
Product: PRC-barrel domain-containing protein
Products: NA
Alternate protein names: PRC-Barrel Domain Protein; PRC-Barrel; PRC-Barrel Protein; Antigen
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MNQAGTGAGIVGGGVGEGPGPEVMAAATLDGNKVISSDGEHVGKISDIMLDVRSGRIAYAVLSEGGFLGMGSNLHAIPWS ALTLDTDEKVFRVDITAQRIKDEPGFDKDHWPSMADETWGTQMHQYYNRDPYWMSSSVDPDVTRGREL
Sequences:
>Translated_148_residues MNQAGTGAGIVGGGVGEGPGPEVMAAATLDGNKVISSDGEHVGKISDIMLDVRSGRIAYAVLSEGGFLGMGSNLHAIPWS ALTLDTDEKVFRVDITAQRIKDEPGFDKDHWPSMADETWGTQMHQYYNRDPYWMSSSVDPDVTRGREL >Mature_148_residues MNQAGTGAGIVGGGVGEGPGPEVMAAATLDGNKVISSDGEHVGKISDIMLDVRSGRIAYAVLSEGGFLGMGSNLHAIPWS ALTLDTDEKVFRVDITAQRIKDEPGFDKDHWPSMADETWGTQMHQYYNRDPYWMSSSVDPDVTRGREL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15942; Mature: 15942
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQAGTGAGIVGGGVGEGPGPEVMAAATLDGNKVISSDGEHVGKISDIMLDVRSGRIAYA CCCCCCCCCEECCCCCCCCCCCEEEEEECCCCEEECCCCCCHHHHHHHEEECCCCEEEEE VLSEGGFLGMGSNLHAIPWSALTLDTDEKVFRVDITAQRIKDEPGFDKDHWPSMADETWG EECCCCEEECCCCCCCCCCEEEEECCCCEEEEEEEEHHHHCCCCCCCCCCCCCCCCHHHH TQMHQYYNRDPYWMSSSVDPDVTRGREL HHHHHHHCCCCCEECCCCCCCCCCCCCC >Mature Secondary Structure MNQAGTGAGIVGGGVGEGPGPEVMAAATLDGNKVISSDGEHVGKISDIMLDVRSGRIAYA CCCCCCCCCEECCCCCCCCCCCEEEEEECCCCEEECCCCCCHHHHHHHEEECCCCEEEEE VLSEGGFLGMGSNLHAIPWSALTLDTDEKVFRVDITAQRIKDEPGFDKDHWPSMADETWG EECCCCEEECCCCCCCCCCEEEEECCCCEEEEEEEEHHHHCCCCCCCCCCCCCCCCHHHH TQMHQYYNRDPYWMSSSVDPDVTRGREL HHHHHHHCCCCCEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA