| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476474
Identifier: 186476474
GI number: 186476474
Start: 1953889
End: 1954374
Strand: Direct
Name: 186476474
Synonym: Bphy_1716
Alternate gene names: NA
Gene position: 1953889-1954374 (Clockwise)
Preceding gene: 186476472
Following gene: 186476481
Centisome position: 56.16
GC content: 61.11
Gene sequence:
>486_bases ATGACATCGCTTACCCAACGCGCTCGTGTGGCGTTCGGCAAACCGTTCAGATACGCGGCCGTCGCCGGATTGCTGCTTGC TGGCAACGTGACGGCATTCGCACAGACTGACACGCCCGTCGGCACATGGCAGACCATTGACGACCACACAGGCCACCCGA AGGCGCTGGTTCAGATCACGCAGGACGCGAACGGCTCGCTGAACGGCAAGGTCGTCAAGGGACTCGGACCCAACGATCAG CCCGACCGCCGCTGCACGGCCTGTACGGACGCGCGCAAGGATCAGCCGATTCTCGGCATGACGATCATCAGCGATATGAA AAAGGATGGCGATGACTGGGACGGCGGGCAGATTCTCGACCCGGAAAACGGCAAGCTCTACAAGTGCAAGATGCACGTCG AAGACGGCGGACAAAAGCTGGTGGTTCGGGGGTACATCGGCGTATCGCTGCTCGGGCGTTCGCAGACGTGGGTTCGTCAG AACTGA
Upstream 100 bases:
>100_bases TCCCATCCTGCACCAGACAGGCATGGCGCCGACTCTCAAGTCCTTTACAACGGCGCCGCGCGACACGCATCGCGACGATT TTCAAACAAGGAGAAAGACA
Downstream 100 bases:
>100_bases GGTGGTACGGCCGCGCTACCGCGCGCTGCAAACAGCGGAAGCGCCGAACAAGCCTGACGTAAAAAAGCCGGCCTGGCAGT CACTTCGCGAGGCCGGCTTT
Product: putative signal peptide protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MTSLTQRARVAFGKPFRYAAVAGLLLAGNVTAFAQTDTPVGTWQTIDDHTGHPKALVQITQDANGSLNGKVVKGLGPNDQ PDRRCTACTDARKDQPILGMTIISDMKKDGDDWDGGQILDPENGKLYKCKMHVEDGGQKLVVRGYIGVSLLGRSQTWVRQ N
Sequences:
>Translated_161_residues MTSLTQRARVAFGKPFRYAAVAGLLLAGNVTAFAQTDTPVGTWQTIDDHTGHPKALVQITQDANGSLNGKVVKGLGPNDQ PDRRCTACTDARKDQPILGMTIISDMKKDGDDWDGGQILDPENGKLYKCKMHVEDGGQKLVVRGYIGVSLLGRSQTWVRQ N >Mature_160_residues TSLTQRARVAFGKPFRYAAVAGLLLAGNVTAFAQTDTPVGTWQTIDDHTGHPKALVQITQDANGSLNGKVVKGLGPNDQP DRRCTACTDARKDQPILGMTIISDMKKDGDDWDGGQILDPENGKLYKCKMHVEDGGQKLVVRGYIGVSLLGRSQTWVRQN
Specific function: Unknown
COG id: COG4731
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17467; Mature: 17336
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLTQRARVAFGKPFRYAAVAGLLLAGNVTAFAQTDTPVGTWQTIDDHTGHPKALVQIT CCCHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCEEECCCCCCCCEEEEEEE QDANGSLNGKVVKGLGPNDQPDRRCTACTDARKDQPILGMTIISDMKKDGDDWDGGQILD CCCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCEEEHHHHHHHHCCCCCCCCCEEEC PENGKLYKCKMHVEDGGQKLVVRGYIGVSLLGRSQTWVRQN CCCCCEEEEEEEECCCCCEEEEEEEEEEEEECCCCCEEECC >Mature Secondary Structure TSLTQRARVAFGKPFRYAAVAGLLLAGNVTAFAQTDTPVGTWQTIDDHTGHPKALVQIT CCHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCEEECCCCCCCCEEEEEEE QDANGSLNGKVVKGLGPNDQPDRRCTACTDARKDQPILGMTIISDMKKDGDDWDGGQILD CCCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCEEEHHHHHHHHCCCCCCCCCEEEC PENGKLYKCKMHVEDGGQKLVVRGYIGVSLLGRSQTWVRQN CCCCCEEEEEEEECCCCCEEEEEEEEEEEEECCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA