| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is marR [C]
Identifier: 186476481
GI number: 186476481
Start: 1964674
End: 1965189
Strand: Direct
Name: marR [C]
Synonym: Bphy_1723
Alternate gene names: 186476481
Gene position: 1964674-1965189 (Clockwise)
Preceding gene: 186476474
Following gene: 186476482
Centisome position: 56.47
GC content: 61.24
Gene sequence:
>516_bases ATGATCGAACCGTCCCCTACGCCACCTCCGGAAGTCAGCGCCTATCAATTGGGAGAAAGCGTCGGCTATCTGATTTCGCG CGTGAAGTCGTCGATGTCCAATCTCGTCACGCAACGCACGATGGCGGAACTCGGCATTACCAGCCAGCAGGCTAGCGTGC TGTTCATGGTCGCCAGCGGAAAATGCCTGCTCGCGGCCGAACTGGCGCGCGAGTACGGCATCGACGCCAGCGCGGTGACG CGCCTGATCGATCGTCTCGAGAAGCGCGGGCTGCTGACGCGCGTTCGCAGCGCGGAGGACCGGCGTGCCGTGCGACTCGC GCTGACGGCCGAAGGTCAGGCGATTGCCGCGCGCATGCCGGCCGTGTTCACGAGCGTCACCGATAAATTGCTATCGGGCT TTTCTCCCGAGGAAACGGGATTCCTCAAGAGTCTTCTGAGGCGTGTCTTGGCCAATAGCTGCGAAGCGTATGGCGAAACC CGTGACTCGGCAAGCAATACCGATAGCAAATCGTAA
Upstream 100 bases:
>100_bases ATGCCACACAGATCCCTGCCCAGCCCGCCATAACGCTTGCCGCGTCAATTAATCGTCCCTACAATGCTGCATAGTCAACC ATTGCATTCGCACGAGAATC
Downstream 100 bases:
>100_bases GAAATTAATTGCATCGTCCATTAAAGAACTACATGTCATTACACGCAAAGAGTCGAGCGATGAACTTCCTTCCTTGGCCC GCGCCTGCCTCGTCACACCG
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; Regulatory Protein MarR; Transcriptional Regulator MarR Family Protein; Multiple Antibiotic Resistance Protein MarR; MarR Transcriptional Regulator; Multiple Antibiotic Resistance Protein; Transcriptional Regulators; Transcriptional Regulator Protein; Transcription Regulator; Multiple Antibiotic Resistance Operon Repressor MarR; Transcriptional Regulator Marr Family; MarR Family Regulatory Helix-Turn-Helix
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MIEPSPTPPPEVSAYQLGESVGYLISRVKSSMSNLVTQRTMAELGITSQQASVLFMVASGKCLLAAELAREYGIDASAVT RLIDRLEKRGLLTRVRSAEDRRAVRLALTAEGQAIAARMPAVFTSVTDKLLSGFSPEETGFLKSLLRRVLANSCEAYGET RDSASNTDSKS
Sequences:
>Translated_171_residues MIEPSPTPPPEVSAYQLGESVGYLISRVKSSMSNLVTQRTMAELGITSQQASVLFMVASGKCLLAAELAREYGIDASAVT RLIDRLEKRGLLTRVRSAEDRRAVRLALTAEGQAIAARMPAVFTSVTDKLLSGFSPEETGFLKSLLRRVLANSCEAYGET RDSASNTDSKS >Mature_171_residues MIEPSPTPPPEVSAYQLGESVGYLISRVKSSMSNLVTQRTMAELGITSQQASVLFMVASGKCLLAAELAREYGIDASAVT RLIDRLEKRGLLTRVRSAEDRRAVRLALTAEGQAIAARMPAVFTSVTDKLLSGFSPEETGFLKSLLRRVLANSCEAYGET RDSASNTDSKS
Specific function: Repressor Of The Marrab Operon Which Is Involved In The Activation Of Both Antibiotic Resistance And Oxidative Stress Genes. Binds To The Maro Operator/Promoter Site. [C]
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18431; Mature: 18431
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEPSPTPPPEVSAYQLGESVGYLISRVKSSMSNLVTQRTMAELGITSQQASVLFMVASG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC KCLLAAELAREYGIDASAVTRLIDRLEKRGLLTRVRSAEDRRAVRLALTAEGQAIAARMP CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEEEECCCCHHHHHHH AVFTSVTDKLLSGFSPEETGFLKSLLRRVLANSCEAYGETRDSASNTDSKS HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MIEPSPTPPPEVSAYQLGESVGYLISRVKSSMSNLVTQRTMAELGITSQQASVLFMVASG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC KCLLAAELAREYGIDASAVTRLIDRLEKRGLLTRVRSAEDRRAVRLALTAEGQAIAARMP CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEEEECCCCHHHHHHH AVFTSVTDKLLSGFSPEETGFLKSLLRRVLANSCEAYGETRDSASNTDSKS HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA