| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476427
Identifier: 186476427
GI number: 186476427
Start: 1884197
End: 1884931
Strand: Direct
Name: 186476427
Synonym: Bphy_1669
Alternate gene names: NA
Gene position: 1884197-1884931 (Clockwise)
Preceding gene: 186476426
Following gene: 186476428
Centisome position: 54.16
GC content: 62.31
Gene sequence:
>735_bases ATGTTGACGCTTCAATCCGATCTGCACGGCAACCATTTGCTCGGCGCATTGCCCTCTCATGAGTGGCAAGCCATTGCCCC TCATCTCGAACTCGTCCATCTGCGCACTGAACAATTGCTGTGCGACTCCGGACAACGCATCCACCACGTCTACTTTCCGA CGACGGCCATCATTTCGATGCTGTCGACGATGGAAGACGGCGGCTCCGTCGAGATCGCCGCTGTGGGTCGCGAGGGCATG ACGGGCGTGCCCGTGCTGACGGGCGGCGAAACGATGCCGAATCGCGTGCAGGTGCAGTGCTCGGGTTTCGCGTACCGTAT GTCTGCACAGGCCCTGCGTCAGCAATTCGCTCGCTCCGACTTCCTGCGCCGGCTGATGCTGCTCTACATGCACGCCCTCC TCACGCAGGTCGCCCAAACGGCTGCCTGCAACCGGCATCATTCGTTGAACAAGCAACTATGCCGCTGGCTCCTGATCGAA GTCGACCGCGTCGCATCGGACGATCTCTCCGTCACCCAGCAGCTGATCGCCGACATGCTCGGGGTGCGTCGCGAAGGCAT CACGGAAGCGGCAGGCAAGCTGCACAACGACGGCCTGATTCACCACAGCCGCGGCCACATTCGCGTGCTCGACCGCAAGG GTCTCGAAGCGCGCGCGTGCGAATGCTACGGACTCGTGAAGCGTGAATTCGACCGCTTGCTGCCGCGTCTGCGCGAAGCC GAGACGGTGAGCTAG
Upstream 100 bases:
>100_bases GATCCTCGCCGCGAACCAGCGGCAACGTAATGGGAGCGCACAGCGCCGGGTTAAAAAGACAAGAGGTCGTGCCGGGCACG GCTTCACGCGAGGACCGATC
Downstream 100 bases:
>100_bases ATTGCGTGCCGGGCATGGTGTCGGCGGCCTCAGCGGCCGCACGCCCGTCCGCATGCCACAGTCTCGAACAGCGCCATGAT CAGATAGCGCGTGCTGCCGG
Product: Crp/FNR family transcriptional regulator
Products: NA
Alternate protein names: CRP/FNR Family Transcriptional Regulator; Crp/FNR Family Transcriptional Regulator; Crp/Fnr Family Transcriptional Regulator; Transcriptional Regulator-Related Protein; Regulatory Protein Crp; Transcriptional Regulator Protein; Transcriptional Regulator; Regulatory Subunit Of CAMP-Dependent Protein Kinases; Transcription Regulator Crp Family; Transcriptional Regulatory Protein; GntR Family Transcriptional Regulator; Two-Component Response Regulator Protein; Transcriptional Regulator CAP/Crp Family; Transcriptional Regulator Crp/Fnr Family Protein
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MLTLQSDLHGNHLLGALPSHEWQAIAPHLELVHLRTEQLLCDSGQRIHHVYFPTTAIISMLSTMEDGGSVEIAAVGREGM TGVPVLTGGETMPNRVQVQCSGFAYRMSAQALRQQFARSDFLRRLMLLYMHALLTQVAQTAACNRHHSLNKQLCRWLLIE VDRVASDDLSVTQQLIADMLGVRREGITEAAGKLHNDGLIHHSRGHIRVLDRKGLEARACECYGLVKREFDRLLPRLREA ETVS
Sequences:
>Translated_244_residues MLTLQSDLHGNHLLGALPSHEWQAIAPHLELVHLRTEQLLCDSGQRIHHVYFPTTAIISMLSTMEDGGSVEIAAVGREGM TGVPVLTGGETMPNRVQVQCSGFAYRMSAQALRQQFARSDFLRRLMLLYMHALLTQVAQTAACNRHHSLNKQLCRWLLIE VDRVASDDLSVTQQLIADMLGVRREGITEAAGKLHNDGLIHHSRGHIRVLDRKGLEARACECYGLVKREFDRLLPRLREA ETVS >Mature_244_residues MLTLQSDLHGNHLLGALPSHEWQAIAPHLELVHLRTEQLLCDSGQRIHHVYFPTTAIISMLSTMEDGGSVEIAAVGREGM TGVPVLTGGETMPNRVQVQCSGFAYRMSAQALRQQFARSDFLRRLMLLYMHALLTQVAQTAACNRHHSLNKQLCRWLLIE VDRVASDDLSVTQQLIADMLGVRREGITEAAGKLHNDGLIHHSRGHIRVLDRKGLEARACECYGLVKREFDRLLPRLREA ETVS
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27329; Mature: 27329
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTLQSDLHGNHLLGALPSHEWQAIAPHLELVHLRTEQLLCDSGQRIHHVYFPTTAIISM CCCCCCCCCCCCEEECCCCCCCHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHH LSTMEDGGSVEIAAVGREGMTGVPVLTGGETMPNRVQVQCSGFAYRMSAQALRQQFARSD HHHHCCCCCEEEEEECCCCCCCCCEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHH FLRRLMLLYMHALLTQVAQTAACNRHHSLNKQLCRWLLIEVDRVASDDLSVTQQLIADML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH GVRREGITEAAGKLHNDGLIHHSRGHIRVLDRKGLEARACECYGLVKREFDRLLPRLREA HHHHCCHHHHHHHHCCCCCEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ETVS CCCC >Mature Secondary Structure MLTLQSDLHGNHLLGALPSHEWQAIAPHLELVHLRTEQLLCDSGQRIHHVYFPTTAIISM CCCCCCCCCCCCEEECCCCCCCHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHH LSTMEDGGSVEIAAVGREGMTGVPVLTGGETMPNRVQVQCSGFAYRMSAQALRQQFARSD HHHHCCCCCEEEEEECCCCCCCCCEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHH FLRRLMLLYMHALLTQVAQTAACNRHHSLNKQLCRWLLIEVDRVASDDLSVTQQLIADML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH GVRREGITEAAGKLHNDGLIHHSRGHIRVLDRKGLEARACECYGLVKREFDRLLPRLREA HHHHCCHHHHHHHHCCCCCEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ETVS CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA