| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476426
Identifier: 186476426
GI number: 186476426
Start: 1883210
End: 1883800
Strand: Direct
Name: 186476426
Synonym: Bphy_1668
Alternate gene names: NA
Gene position: 1883210-1883800 (Clockwise)
Preceding gene: 186476422
Following gene: 186476427
Centisome position: 54.13
GC content: 63.11
Gene sequence:
>591_bases TTGCGGGCCCAATTCGTCTGTGCAGGCGAATGCACGCGCTGCCGCATCAGGTCTGCGCACGTCGCCGAGCCTGTCGTTGT GCTTAGGATTGCGCTGCGGGCGGGTGCAGCATTGCGCCTGGCGATTCCCCTAACCGTGGGAGACGCGGGCGCTGTTGCGA ACGGGCGAACGGTGTTGCGGTCGGCCGTCACAGTCACAGTCACAGTCACAGTCACAGTCACAGTCACGGCCACGGGCGCG GGCGCGGGCGCAGGCAGCGCATATCTCACGATTGAGACAAACCCGACACGCGCTCGCCGCGACCGCCCACGCTCCCTGCC TCGCGACCGCGGCGCAACGGCCACCCTCATCAAACGTTTGCGTCGCAAGCGCATCGATGTGGCTTCCATCTGTTCAATTG TGCTGCGACCCAACGCTCGCGCCATTAACGTTGGTATTCGTCCGACACAATCGCACTTGAACCGGGGCGCGCATGAATCA CAAACCGTCTTCGGTGCGGCAGCACACCAACGGCATGGAACATATCTGAATCAAATCGCGAAACAGCCGAAACCGCACTT CACCGCGCGTTCCCGGCTGTGGCACGCCTGA
Upstream 100 bases:
>100_bases CCCTTTAGTCGTTCATAGCCTCTGCACCACTCACGCTTTCCCCGTCGACCGTTGCCATTGAAGCAAAGGGCAATGTCCCC GCTCTGTACGAGAACACACG
Downstream 100 bases:
>100_bases ATACTGGCTGCGAACTCGCATCGGCTTATCTTCAATGTCCGTAAAATCAGATGTTTATCTACGTTAAATTAAGAACTTTC TCAGCAATGTCTCGTAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MRAQFVCAGECTRCRIRSAHVAEPVVVLRIALRAGAALRLAIPLTVGDAGAVANGRTVLRSAVTVTVTVTVTVTVTATGA GAGAGSAYLTIETNPTRARRDRPRSLPRDRGATATLIKRLRRKRIDVASICSIVLRPNARAINVGIRPTQSHLNRGAHES QTVFGAAAHQRHGTYLNQIAKQPKPHFTARSRLWHA
Sequences:
>Translated_196_residues MRAQFVCAGECTRCRIRSAHVAEPVVVLRIALRAGAALRLAIPLTVGDAGAVANGRTVLRSAVTVTVTVTVTVTVTATGA GAGAGSAYLTIETNPTRARRDRPRSLPRDRGATATLIKRLRRKRIDVASICSIVLRPNARAINVGIRPTQSHLNRGAHES QTVFGAAAHQRHGTYLNQIAKQPKPHFTARSRLWHA >Mature_196_residues MRAQFVCAGECTRCRIRSAHVAEPVVVLRIALRAGAALRLAIPLTVGDAGAVANGRTVLRSAVTVTVTVTVTVTVTATGA GAGAGSAYLTIETNPTRARRDRPRSLPRDRGATATLIKRLRRKRIDVASICSIVLRPNARAINVGIRPTQSHLNRGAHES QTVFGAAAHQRHGTYLNQIAKQPKPHFTARSRLWHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21031; Mature: 21031
Theoretical pI: Translated: 12.41; Mature: 12.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAQFVCAGECTRCRIRSAHVAEPVVVLRIALRAGAALRLAIPLTVGDAGAVANGRTVLR CCCCEEECCCCCEEEECCCCCCCHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCHHHHE SAVTVTVTVTVTVTVTATGAGAGAGSAYLTIETNPTRARRDRPRSLPRDRGATATLIKRL EEEEEEEEEEEEEEEEEECCCCCCCCEEEEEECCCCHHHHCCCCCCCCCCCCHHHHHHHH RRKRIDVASICSIVLRPNARAINVGIRPTQSHLNRGAHESQTVFGAAAHQRHGTYLNQIA HHHCCCHHHHHHHHCCCCCEEEEECCCCCHHHHHCCCCCCHHEEHHHHHHHCCHHHHHHH KQPKPHFTARSRLWHA HCCCCCCCHHHHCCCC >Mature Secondary Structure MRAQFVCAGECTRCRIRSAHVAEPVVVLRIALRAGAALRLAIPLTVGDAGAVANGRTVLR CCCCEEECCCCCEEEECCCCCCCHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCHHHHE SAVTVTVTVTVTVTVTATGAGAGAGSAYLTIETNPTRARRDRPRSLPRDRGATATLIKRL EEEEEEEEEEEEEEEEEECCCCCCCCEEEEEECCCCHHHHCCCCCCCCCCCCHHHHHHHH RRKRIDVASICSIVLRPNARAINVGIRPTQSHLNRGAHESQTVFGAAAHQRHGTYLNQIA HHHCCCHHHHHHHHCCCCCEEEEECCCCCHHHHHCCCCCCHHEEHHHHHHHCCHHHHHHH KQPKPHFTARSRLWHA HCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA