| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is aat
Identifier: 186476420
GI number: 186476420
Start: 1877009
End: 1877746
Strand: Direct
Name: aat
Synonym: Bphy_1662
Alternate gene names: 186476420
Gene position: 1877009-1877746 (Clockwise)
Preceding gene: 186476419
Following gene: 186476421
Centisome position: 53.95
GC content: 65.58
Gene sequence:
>738_bases ATGGTTCCCTGGCTAGGCCCCGACGATCCCTTTCCGCCCGTCGAACGCGCGCTGTCCGCGGCGAGCGGCGCGCCCGGCCT GCTCGCGGCGAGCGCGGACCTGCTGCCGTCCAGACTCATCGACGCTTACCGGCGCGGCATTTTCCCGTGGTATTCGGACG GCCAGCCGGTGCTCTGGTGGACGCCCGATCCGCGCATGATCCTGCGTCCGCGCGAGTTCAAGATTTCCCCGTCGCTGAAA AAGACGCTCAGGCGCGTGCTGCGCGACGACACTTGGGAAATCCGCGTCGACGCCGATTTCCCCGCCGTGATGCGCGCCTG CGCGCTCGCACCGCGTCACGGGCAGCGCGGCACGTGGATCACGTCGGATGTGATCGACGCATATTCGACGCTGCACCGTC GCGGCGAAGCGCACAGCATCGAAACGTGGCACGCAGGCAAGCGCGTCGGCGGGTTGTATGGCGTGTCGTTCGGCAAGATG TTTTTCGGCGAATCCATGTATGCAGAAGTCACCGATGCGTCGAAAATTGCGCTCTCCGCGCTCGTCTTCCACCTGCGACG TCACGAAATAGAAATGATAGACTGCCAGCAGAACACGTCGCATCTGGCTTCGCTGGGCGGCCGCGAGATCGCGCGCAAGG CGTTCGTCGCACATGTGCGCGCGGCCGTCGACTCCGCGCCGATCCCCTGGTCGTTCGACAAGTCGGTTCTGCGCGATCTT CTCGCGCCGGCGCAGTGA
Upstream 100 bases:
>100_bases CTGCGCTTCTTCTTCACCGATCGCACGTCGGGCAACTACGGCCTGCACACGGGCGATATCTTCCGCTCGCTGCGCGACGG TTGACGACAACAGCGGCCGC
Downstream 100 bases:
>100_bases TGCATGCAGCGTCGAGGGCCGACGCCGCTGCATGAACGACGCAAGGCACAGGGACGTGTCCGTCGGGCACGCTGCAAGCT ACTGTCCAGTGCGCGATTCG
Product: leucyl/phenylalanyl-tRNA--protein transferase
Products: NA
Alternate protein names: L/F-transferase; Leucyltransferase; Phenyalanyltransferase
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MVPWLGPDDPFPPVERALSAASGAPGLLAASADLLPSRLIDAYRRGIFPWYSDGQPVLWWTPDPRMILRPREFKISPSLK KTLRRVLRDDTWEIRVDADFPAVMRACALAPRHGQRGTWITSDVIDAYSTLHRRGEAHSIETWHAGKRVGGLYGVSFGKM FFGESMYAEVTDASKIALSALVFHLRRHEIEMIDCQQNTSHLASLGGREIARKAFVAHVRAAVDSAPIPWSFDKSVLRDL LAPAQ
Sequences:
>Translated_245_residues MVPWLGPDDPFPPVERALSAASGAPGLLAASADLLPSRLIDAYRRGIFPWYSDGQPVLWWTPDPRMILRPREFKISPSLK KTLRRVLRDDTWEIRVDADFPAVMRACALAPRHGQRGTWITSDVIDAYSTLHRRGEAHSIETWHAGKRVGGLYGVSFGKM FFGESMYAEVTDASKIALSALVFHLRRHEIEMIDCQQNTSHLASLGGREIARKAFVAHVRAAVDSAPIPWSFDKSVLRDL LAPAQ >Mature_245_residues MVPWLGPDDPFPPVERALSAASGAPGLLAASADLLPSRLIDAYRRGIFPWYSDGQPVLWWTPDPRMILRPREFKISPSLK KTLRRVLRDDTWEIRVDADFPAVMRACALAPRHGQRGTWITSDVIDAYSTLHRRGEAHSIETWHAGKRVGGLYGVSFGKM FFGESMYAEVTDASKIALSALVFHLRRHEIEMIDCQQNTSHLASLGGREIARKAFVAHVRAAVDSAPIPWSFDKSVLRDL LAPAQ
Specific function: Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
COG id: COG2360
COG function: function code O; Leu/Phe-tRNA-protein transferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the L/F-transferase family
Homologues:
Organism=Escherichia coli, GI1787111, Length=210, Percent_Identity=42.8571428571429, Blast_Score=170, Evalue=1e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LFTR_BURP8 (B2JKL7)
Other databases:
- EMBL: CP001043 - RefSeq: YP_001857890.1 - GeneID: 6243153 - GenomeReviews: CP001043_GR - KEGG: bph:Bphy_1662 - HOGENOM: HBG485363 - OMA: GEPILWW - ProtClustDB: PRK00301 - GO: GO:0005737 - HAMAP: MF_00688 - InterPro: IPR016181 - InterPro: IPR004616 - TIGRFAMs: TIGR00667
Pfam domain/function: PF03588 Leu_Phe_trans; SSF55729 Acyl_CoA_acyltransferase
EC number: =2.3.2.6
Molecular weight: Translated: 27354; Mature: 27354
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPWLGPDDPFPPVERALSAASGAPGLLAASADLLPSRLIDAYRRGIFPWYSDGQPVLWW CCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE TPDPRMILRPREFKISPSLKKTLRRVLRDDTWEIRVDADFPAVMRACALAPRHGQRGTWI CCCCCEEECCCCEEECHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCEE TSDVIDAYSTLHRRGEAHSIETWHAGKRVGGLYGVSFGKMFFGESMYAEVTDASKIALSA HHHHHHHHHHHHHCCCCCCCHHHHCCCHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LVFHLRRHEIEMIDCQQNTSHLASLGGREIARKAFVAHVRAAVDSAPIPWSFDKSVLRDL HHHHHHHHHHEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH LAPAQ HCCCC >Mature Secondary Structure MVPWLGPDDPFPPVERALSAASGAPGLLAASADLLPSRLIDAYRRGIFPWYSDGQPVLWW CCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE TPDPRMILRPREFKISPSLKKTLRRVLRDDTWEIRVDADFPAVMRACALAPRHGQRGTWI CCCCCEEECCCCEEECHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCEE TSDVIDAYSTLHRRGEAHSIETWHAGKRVGGLYGVSFGKMFFGESMYAEVTDASKIALSA HHHHHHHHHHHHHCCCCCCCHHHHCCCHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LVFHLRRHEIEMIDCQQNTSHLASLGGREIARKAFVAHVRAAVDSAPIPWSFDKSVLRDL HHHHHHHHHHEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH LAPAQ HCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA