| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is ate
Identifier: 186476421
GI number: 186476421
Start: 1877917
End: 1878756
Strand: Direct
Name: ate
Synonym: Bphy_1663
Alternate gene names: 186476421
Gene position: 1877917-1878756 (Clockwise)
Preceding gene: 186476420
Following gene: 186476422
Centisome position: 53.98
GC content: 64.52
Gene sequence:
>840_bases GTGACTCACCCGAATGAGCTGCCGCTTTCACCGCTTTCGGCGCTGCAATTCTATGCAACAGCGCCTTACCCTTGCAGTTA CCTGGAAGGGCGCGTCGCGCGCTCGCAAGTTGCGACGCCCAGCCACCTGATCAACTCCGACGTCTATACCGAACTCGTTC GCGCAGGCTTTCGCCGCTCGGGCGTGTTCACCTACCGGCCGTATTGCGACGGGTGCCGCGCGTGCGTGCCCGTGCGTGTG CCCGTCGAGCGCTTCACGCCGAACCGCACGCAGCGGCGCGTGTGGAAAAAGCACGGCGGCCTGATCGCGACTGTCGCGCC GCTGCACTACGACGAAGAACATTACGCGCTCTACATGCGTTACCAGTCGGCGCGGCATGCGGGCGGCGGCATGGACCGCG ACAGCCGCGACCAGTACGAGCAGTTCCTGCTGCAGAGCCGGATCAACTCGCGCCTCGTGGAATTCCGCGAGCCACCCAAC CCCGGCTATGCGGGGCATCCGGACATGCCGGGCACGCTGCGCATGGTCAGCATGATCGATATCCTCGGCGACGGGCTATC GTCCGTGTACACGTTTTTCGATCCCGACCAGCCGCACACCAGCTACGGCACCTACAACATCCTCTGGCAGATCGAGCAGG CGCGCAGCCTGAAGCTGCCGCACGTGTATCTCGGCTACTGGATCCGCGAAAGCCCGAAGATGGCCTACAAGGCCAATTTC ACGCCGCTCGAAGGGCTTTTCGACGGCACGTGGAAAGTGCTCGATCCTGCCGCGCCCGACCTCTCCCCCGTCGATGCCGC GAAAGGTGGCAGCCGCGGATTGCGCATCGATCGCGGCTGA
Upstream 100 bases:
>100_bases GCTGCAAGCTACTGTCCAGTGCGCGATTCGGCGTGCTACGGCGACACAGCCAGCAGCACGCCGGATTGGCAAAACCAGAA ACGCTTCGAGAGCTGCTAAC
Downstream 100 bases:
>100_bases AGCGCAGGCGGACGCACGCACGGCACGCACGTACATCGAAACGCCCGTCGCCGCGCTGCCGACCCGTTAAAATAGCGGGT TTTCATTTTTCAGCCGCCAG
Product: arginyl-tRNA-protein transferase
Products: NA
Alternate protein names: Arginyltransferase; R-transferase
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MTHPNELPLSPLSALQFYATAPYPCSYLEGRVARSQVATPSHLINSDVYTELVRAGFRRSGVFTYRPYCDGCRACVPVRV PVERFTPNRTQRRVWKKHGGLIATVAPLHYDEEHYALYMRYQSARHAGGGMDRDSRDQYEQFLLQSRINSRLVEFREPPN PGYAGHPDMPGTLRMVSMIDILGDGLSSVYTFFDPDQPHTSYGTYNILWQIEQARSLKLPHVYLGYWIRESPKMAYKANF TPLEGLFDGTWKVLDPAAPDLSPVDAAKGGSRGLRIDRG
Sequences:
>Translated_279_residues MTHPNELPLSPLSALQFYATAPYPCSYLEGRVARSQVATPSHLINSDVYTELVRAGFRRSGVFTYRPYCDGCRACVPVRV PVERFTPNRTQRRVWKKHGGLIATVAPLHYDEEHYALYMRYQSARHAGGGMDRDSRDQYEQFLLQSRINSRLVEFREPPN PGYAGHPDMPGTLRMVSMIDILGDGLSSVYTFFDPDQPHTSYGTYNILWQIEQARSLKLPHVYLGYWIRESPKMAYKANF TPLEGLFDGTWKVLDPAAPDLSPVDAAKGGSRGLRIDRG >Mature_278_residues THPNELPLSPLSALQFYATAPYPCSYLEGRVARSQVATPSHLINSDVYTELVRAGFRRSGVFTYRPYCDGCRACVPVRVP VERFTPNRTQRRVWKKHGGLIATVAPLHYDEEHYALYMRYQSARHAGGGMDRDSRDQYEQFLLQSRINSRLVEFREPPNP GYAGHPDMPGTLRMVSMIDILGDGLSSVYTFFDPDQPHTSYGTYNILWQIEQARSLKLPHVYLGYWIRESPKMAYKANFT PLEGLFDGTWKVLDPAAPDLSPVDAAKGGSRGLRIDRG
Specific function: May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate (Potential)
COG id: COG2935
COG function: function code O; Putative arginyl-tRNA:protein arginylyltransferase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the R-transferase family
Homologues:
Organism=Homo sapiens, GI50345877, Length=162, Percent_Identity=32.0987654320988, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI50345875, Length=158, Percent_Identity=31.6455696202532, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI45549106, Length=138, Percent_Identity=33.3333333333333, Blast_Score=65, Evalue=6e-11, Organism=Drosophila melanogaster, GI45551129, Length=138, Percent_Identity=33.3333333333333, Blast_Score=65, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ATE_BURP8 (B2JKL8)
Other databases:
- EMBL: CP001043 - RefSeq: YP_001857891.1 - GeneID: 6243154 - GenomeReviews: CP001043_GR - KEGG: bph:Bphy_1663 - HOGENOM: HBG651116 - OMA: PQFYLTA - ProtClustDB: PRK01305 - GO: GO:0005737 - GO: GO:0006412 - HAMAP: MF_00689 - InterPro: IPR016181 - InterPro: IPR007472 - InterPro: IPR017138 - InterPro: IPR007471 - PIRSF: PIRSF037208
Pfam domain/function: PF04377 ATE_C; PF04376 ATE_N; SSF55729 Acyl_CoA_acyltransferase
EC number: =2.3.2.8
Molecular weight: Translated: 31620; Mature: 31489
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHPNELPLSPLSALQFYATAPYPCSYLEGRVARSQVATPSHLINSDVYTELVRAGFRRS CCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC GVFTYRPYCDGCRACVPVRVPVERFTPNRTQRRVWKKHGGLIATVAPLHYDEEHYALYMR CCEEECCCCCCCCCEEEEECCHHHCCCCHHHHHHHHHHCCEEEEEECCEECCCCEEEEEE YQSARHAGGGMDRDSRDQYEQFLLQSRINSRLVEFREPPNPGYAGHPDMPGTLRMVSMID EHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH ILGDGLSSVYTFFDPDQPHTSYGTYNILWQIEQARSLKLPHVYLGYWIRESPKMAYKANF HHHCCHHHHEEECCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEECCCCCEEEEECC TPLEGLFDGTWKVLDPAAPDLSPVDAAKGGSRGLRIDRG CCHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCEEECCC >Mature Secondary Structure THPNELPLSPLSALQFYATAPYPCSYLEGRVARSQVATPSHLINSDVYTELVRAGFRRS CCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC GVFTYRPYCDGCRACVPVRVPVERFTPNRTQRRVWKKHGGLIATVAPLHYDEEHYALYMR CCEEECCCCCCCCCEEEEECCHHHCCCCHHHHHHHHHHCCEEEEEECCEECCCCEEEEEE YQSARHAGGGMDRDSRDQYEQFLLQSRINSRLVEFREPPNPGYAGHPDMPGTLRMVSMID EHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH ILGDGLSSVYTFFDPDQPHTSYGTYNILWQIEQARSLKLPHVYLGYWIRESPKMAYKANF HHHCCHHHHEEECCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEECCCCCEEEEECC TPLEGLFDGTWKVLDPAAPDLSPVDAAKGGSRGLRIDRG CCHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA