| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is ypeB [C]
Identifier: 186476398
GI number: 186476398
Start: 1862178
End: 1862390
Strand: Direct
Name: ypeB [C]
Synonym: Bphy_1640
Alternate gene names: 186476398
Gene position: 1862178-1862390 (Clockwise)
Preceding gene: 186476397
Following gene: 186476400
Centisome position: 53.52
GC content: 54.93
Gene sequence:
>213_bases ATGAACATCGAACAGTTTGAATTGCTCGTGACACGTACGATGCCGTACGGCAAGTACAAAGGACGTGTGATCGCCGATCT GCCGGGACATTATCTGAACTGGTTTGCGCGCGAAGGATTTCCGCCTGGCGAGATCGGGCGGCTGATTGCGTTGATGCACG AGATCGATCACAACGGACTGAAGGGATTGCTGGAGCCGTTGCGCAAGCGGTGA
Upstream 100 bases:
>100_bases TTCGGTCTTGAGCGCGATGCGGGCGCACATGTGAGCGGGCATCGGCGGGAACGGACCTGAGTTTGCCGTTCTACTTTGGA TTGCGAGGTTGTGCCTGACG
Downstream 100 bases:
>100_bases GCTCTGTTCGATGTATGCGGGCGCGATGCTTTGCACCGCGCTCCACACGTCAGGCGTGACGTAGTGCCAAAACAAAACGG CATTGCGATTGCTCACAATG
Product: putative cytoplasmic protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 70; Mature: 70
Protein sequence:
>70_residues MNIEQFELLVTRTMPYGKYKGRVIADLPGHYLNWFAREGFPPGEIGRLIALMHEIDHNGLKGLLEPLRKR
Sequences:
>Translated_70_residues MNIEQFELLVTRTMPYGKYKGRVIADLPGHYLNWFAREGFPPGEIGRLIALMHEIDHNGLKGLLEPLRKR >Mature_70_residues MNIEQFELLVTRTMPYGKYKGRVIADLPGHYLNWFAREGFPPGEIGRLIALMHEIDHNGLKGLLEPLRKR
Specific function: Unknown
COG id: COG3530
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082098, Length=70, Percent_Identity=44.2857142857143, Blast_Score=61, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8119; Mature: 8119
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIEQFELLVTRTMPYGKYKGRVIADLPGHYLNWFAREGFPPGEIGRLIALMHEIDHNGL CCCHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCH KGLLEPLRKR HHHHHHHHCC >Mature Secondary Structure MNIEQFELLVTRTMPYGKYKGRVIADLPGHYLNWFAREGFPPGEIGRLIALMHEIDHNGL CCCHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCH KGLLEPLRKR HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA