| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is tas [H]
Identifier: 186476396
GI number: 186476396
Start: 1859480
End: 1860532
Strand: Reverse
Name: tas [H]
Synonym: Bphy_1638
Alternate gene names: 186476396
Gene position: 1860532-1859480 (Counterclockwise)
Preceding gene: 186476399
Following gene: 186476395
Centisome position: 53.48
GC content: 62.77
Gene sequence:
>1053_bases ATGGAATACCGCAAGCTCGGCGAAACGGATGTACAGGTCAGCCTGATCGGTCTCGGCACGATGACGTGGGGCGAGCAGAA TACGGAGCGCGATGCCCACGAGCAGATGGATTACGCACTCGCTCAGGGCATCACGCTAATCGATGCCGCCGAGATGTATC CCGTGCCGCCGCGCCCGGAAACGCAAGGATCGACGGAACGCTATATCGGCACGTGGCTCGCGCAGCATCGTTCGATGCGC GACAAGATCGTGCTCGCCACCAAGATCGCCGGCCCCGCGCGTCAGCCGCACAACCCGCGCCACATTCGCGGCGAGGGCAA CCAGTTCGACCGCAAGAATCTCACCGAGGCGCTGAACGACAGCCTGAAGCGTCTGCAAACCGATTACGTCGACCTGTATC AGTTGCACTGGCCCGATCGCAGCACGATGACGTTCGGCCGTCCCGCGTATCCGTGGATCGACGACGCGTACACGGTGCCC ATCGAAGAGACGCTTTCCGTGCTCGCCGATTTCGTGAAAGAAGGGAAGGTGCGTCATATCGGTGTGTCGAACGAAACGCC GTGGGGCGTTGCACAATTCCTGCGCGCGTCGGAGAAGCTTGGCTTGCCGCGCATCGTATCGATCCAGAATCCCTATAGCC TCTTGAACCGGACGTTCGAAGCGGGGCTTTCGGAGTTCACGCATCGCGAGCATGTCGGTCTGCTGGCGTATTCGCCGCTC GCGTTCGGCTGGCTCTCGGGCAAGTACGAGCGCGGGGCGCGCCCGGCAGGCGCGCGCATCACGCTGTTCGAGCGCTTCCA GCGCTACAGCAAACCGCAGGCCGTGCATGCGACGAGCCGCTATGTCGAACTCGCCAGGCGCCACGGTCTGTCGCCCGCGC AATTCGCGCTCGCGTTCGTGAACAGCCGGCCCTTCGTCACGAGCAATCTGATCGGCGCAACGTCGCTCGATCAGTTGAAA GAGAACATTGCGAGCGTCGACGTGAAGCTCTCGGCGGACGCATTGGCCGAGATCGATGCGCTGCACGAATTGCAACCGAA CCCGGCGCCCTGA
Upstream 100 bases:
>100_bases TTCAGACGACATTCTATCCACGCACGCGTTTGACGCGGACATGGTAATTTCGCCGTTTACCGATGGATCACCCGTCAGAA CACGAAACAGGAACGAATCG
Downstream 100 bases:
>100_bases GCGCGGGATTCGACACGCTGCCAGACACGGCGTGCCGCGACGGCGGTACGCCGACACCCACAGAACGCTTGCGCCAGATG CGTGAGCCCAACACCGCACC
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MEYRKLGETDVQVSLIGLGTMTWGEQNTERDAHEQMDYALAQGITLIDAAEMYPVPPRPETQGSTERYIGTWLAQHRSMR DKIVLATKIAGPARQPHNPRHIRGEGNQFDRKNLTEALNDSLKRLQTDYVDLYQLHWPDRSTMTFGRPAYPWIDDAYTVP IEETLSVLADFVKEGKVRHIGVSNETPWGVAQFLRASEKLGLPRIVSIQNPYSLLNRTFEAGLSEFTHREHVGLLAYSPL AFGWLSGKYERGARPAGARITLFERFQRYSKPQAVHATSRYVELARRHGLSPAQFALAFVNSRPFVTSNLIGATSLDQLK ENIASVDVKLSADALAEIDALHELQPNPAP
Sequences:
>Translated_350_residues MEYRKLGETDVQVSLIGLGTMTWGEQNTERDAHEQMDYALAQGITLIDAAEMYPVPPRPETQGSTERYIGTWLAQHRSMR DKIVLATKIAGPARQPHNPRHIRGEGNQFDRKNLTEALNDSLKRLQTDYVDLYQLHWPDRSTMTFGRPAYPWIDDAYTVP IEETLSVLADFVKEGKVRHIGVSNETPWGVAQFLRASEKLGLPRIVSIQNPYSLLNRTFEAGLSEFTHREHVGLLAYSPL AFGWLSGKYERGARPAGARITLFERFQRYSKPQAVHATSRYVELARRHGLSPAQFALAFVNSRPFVTSNLIGATSLDQLK ENIASVDVKLSADALAEIDALHELQPNPAP >Mature_350_residues MEYRKLGETDVQVSLIGLGTMTWGEQNTERDAHEQMDYALAQGITLIDAAEMYPVPPRPETQGSTERYIGTWLAQHRSMR DKIVLATKIAGPARQPHNPRHIRGEGNQFDRKNLTEALNDSLKRLQTDYVDLYQLHWPDRSTMTFGRPAYPWIDDAYTVP IEETLSVLADFVKEGKVRHIGVSNETPWGVAQFLRASEKLGLPRIVSIQNPYSLLNRTFEAGLSEFTHREHVGLLAYSPL AFGWLSGKYERGARPAGARITLFERFQRYSKPQAVHATSRYVELARRHGLSPAQFALAFVNSRPFVTSNLIGATSLDQLK ENIASVDVKLSADALAEIDALHELQPNPAP
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436969, Length=360, Percent_Identity=30.2777777777778, Blast_Score=130, Evalue=1e-30, Organism=Homo sapiens, GI4504825, Length=358, Percent_Identity=30.1675977653631, Blast_Score=129, Evalue=4e-30, Organism=Homo sapiens, GI27436964, Length=360, Percent_Identity=28.3333333333333, Blast_Score=123, Evalue=2e-28, Organism=Homo sapiens, GI27436962, Length=360, Percent_Identity=28.3333333333333, Blast_Score=123, Evalue=3e-28, Organism=Homo sapiens, GI27436966, Length=360, Percent_Identity=28.0555555555556, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI27436971, Length=362, Percent_Identity=28.4530386740331, Blast_Score=111, Evalue=8e-25, Organism=Homo sapiens, GI41152114, Length=249, Percent_Identity=30.1204819277108, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI223718702, Length=323, Percent_Identity=28.1733746130031, Blast_Score=79, Evalue=8e-15, Organism=Homo sapiens, GI41327764, Length=337, Percent_Identity=27.299703264095, Blast_Score=77, Evalue=2e-14, Organism=Escherichia coli, GI1789199, Length=350, Percent_Identity=59.1428571428571, Blast_Score=426, Evalue=1e-120, Organism=Escherichia coli, GI87081735, Length=356, Percent_Identity=30.0561797752809, Blast_Score=137, Evalue=9e-34, Organism=Escherichia coli, GI1789375, Length=348, Percent_Identity=30.7471264367816, Blast_Score=118, Evalue=5e-28, Organism=Escherichia coli, GI1788070, Length=346, Percent_Identity=29.7687861271676, Blast_Score=114, Evalue=9e-27, Organism=Escherichia coli, GI1788081, Length=345, Percent_Identity=27.536231884058, Blast_Score=88, Evalue=7e-19, Organism=Saccharomyces cerevisiae, GI6323998, Length=324, Percent_Identity=26.5432098765432, Blast_Score=98, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6319958, Length=324, Percent_Identity=25.9259259259259, Blast_Score=95, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6325169, Length=356, Percent_Identity=24.7191011235955, Blast_Score=94, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6319951, Length=317, Percent_Identity=25.2365930599369, Blast_Score=88, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6322615, Length=269, Percent_Identity=24.907063197026, Blast_Score=84, Evalue=4e-17, Organism=Saccharomyces cerevisiae, GI6320079, Length=236, Percent_Identity=28.8135593220339, Blast_Score=67, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6320576, Length=311, Percent_Identity=24.7588424437299, Blast_Score=64, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6324694, Length=191, Percent_Identity=31.9371727748691, Blast_Score=64, Evalue=3e-11, Organism=Drosophila melanogaster, GI24646159, Length=334, Percent_Identity=26.0479041916168, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI24646155, Length=340, Percent_Identity=27.9411764705882, Blast_Score=71, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 39363; Mature: 39363
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYRKLGETDVQVSLIGLGTMTWGEQNTERDAHEQMDYALAQGITLIDAAEMYPVPPRPE CCCCCCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEHHHHCCCCCCCC TQGSTERYIGTWLAQHRSMRDKIVLATKIAGPARQPHNPRHIRGEGNQFDRKNLTEALND CCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCEECCCCCCCCHHHHHHHHHH SLKRLQTDYVDLYQLHWPDRSTMTFGRPAYPWIDDAYTVPIEETLSVLADFVKEGKVRHI HHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHCCCEEEE GVSNETPWGVAQFLRASEKLGLPRIVSIQNPYSLLNRTFEAGLSEFTHREHVGLLAYSPL ECCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCH AFGWLSGKYERGARPAGARITLFERFQRYSKPQAVHATSRYVELARRHGLSPAQFALAFV HHHHHCCCHHCCCCCCCCEEHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH NSRPFVTSNLIGATSLDQLKENIASVDVKLSADALAEIDALHELQPNPAP CCCCCEECCCCCCCHHHHHHHHHHHCCEEECHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MEYRKLGETDVQVSLIGLGTMTWGEQNTERDAHEQMDYALAQGITLIDAAEMYPVPPRPE CCCCCCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEHHHHCCCCCCCC TQGSTERYIGTWLAQHRSMRDKIVLATKIAGPARQPHNPRHIRGEGNQFDRKNLTEALND CCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCEECCCCCCCCHHHHHHHHHH SLKRLQTDYVDLYQLHWPDRSTMTFGRPAYPWIDDAYTVPIEETLSVLADFVKEGKVRHI HHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHCCCEEEE GVSNETPWGVAQFLRASEKLGLPRIVSIQNPYSLLNRTFEAGLSEFTHREHVGLLAYSPL ECCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCH AFGWLSGKYERGARPAGARITLFERFQRYSKPQAVHATSRYVELARRHGLSPAQFALAFV HHHHHCCCHHCCCCCCCCEEHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH NSRPFVTSNLIGATSLDQLKENIASVDVKLSADALAEIDALHELQPNPAP CCCCCEECCCCCCCHHHHHHHHHHHCCEEECHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9560382; 9278503 [H]