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The map label for this gene is yraQ [H]

Identifier: 186476395

GI number: 186476395

Start: 1858137

End: 1859201

Strand: Reverse

Name: yraQ [H]

Synonym: Bphy_1637

Alternate gene names: 186476395

Gene position: 1859201-1858137 (Counterclockwise)

Preceding gene: 186476396

Following gene: 186476394

Centisome position: 53.44

GC content: 68.54

Gene sequence:

>1065_bases
ATGACGATGACCTCCACGCGTCCCACCTCCTCGCCCGCCGCTTCGACATGGCCGATTTTCGTGCTGCTCGCCGTCGCCGG
GCTTTTCTACGTCAAATGGTTTCCGTATTACCACCGCGCCTTGACGGCCGCGTCGACGCATTCGATCGGCGCGTCGATCC
TGATGGGCACGGCTGCGAGCGCGCCCGCGCCGTCGTGGGATGCGGCCCTCGGCTACGCGCTCGTCTACGGCAAGGCAATC
TGGCAGGCGATGGTGCTCGGCCTGCTGCTCGGCTCGGCTGTGCAGGCGCTGCTGCCCGCATATTGGGTGGCGCGGCTGCT
CGGCAAGTCGGGCTTCGGCAGCGTCGCGGCAGGCGGTTTGCTGGCGTTGCCGGGGATGATGTGCACGTGCTGCGCGGCGC
CCGTCGTCGCCGGTTTGCGTGAGCGCCAGGCTTCGCCGGGCGGCGCGATCGCGTTCTGGCTCGGCAATTCGGTGCTCAAT
CCCGCAACGCTCGTGTTCATGGGCTTCGTGCTCGGCTGGCAGTGGGCGGGCTTGCGCCTCGTGCTCGGCGTCGCGATGGT
GTTCGGCCTTGGCTATGTGGTGAACCGGCTGGTAACGCGCGCGGAAGCCCAGACGGCCGACGCGCGCCTCGTCGAGCTCG
TCGATCAGCAGCGCGCGGGGAATCCTTTCGTGCGCTGGCTGTCGATCTTCGTACGGATGGCCGTGCGCCTCGTGCCGGAA
TACATCGTGCTGATCCTGCTGCTAGGCGCAGCGCGGGCGTGGCTGTTTCCGCACGTCGGGCCGGAAATCGGCAACGACAT
TGTTTGGATCGCGGCGCTGGCCGTCGCGGGAATGCTGTTCGTGATCCCCACGGCGGGCGAGGTGCCCATCATTCAGGCGA
TGCTGTCGCTCGGCATGGGTGTCGGCCCCGCGGGCGCGCTGCTGATGACGCTGCCGCCCATTAGCGTGCCGTCGCTGGCG
ATGCTGGCGCGCTCGTTCCGCCCGCGCGTGCTGACCATCGTGGCCGTTGCCGTGGTCGCGTTCGGCGTGCTGGCGGGACT
ACTCGCCGTCGCGCTCGGATTCTGA

Upstream 100 bases:

>100_bases
TGCCGATCCGTGTACAGTGCGCACGATTCGCGCATGGCTTGCGCGCGGTTCGCGCACCTCGTACCTTAGCCCCACAACAG
AACGACCCGTATCACGACCC

Downstream 100 bases:

>100_bases
GTAAGCGTCCGTCATAAAAGGCGGCGTCATTGTTCCGAATCTCGTCCTAAACTGGGGAGGCGAGCAGACGATCGAGCGCC
CGCCTGGGGCGGCAACACGG

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 353

Protein sequence:

>354_residues
MTMTSTRPTSSPAASTWPIFVLLAVAGLFYVKWFPYYHRALTAASTHSIGASILMGTAASAPAPSWDAALGYALVYGKAI
WQAMVLGLLLGSAVQALLPAYWVARLLGKSGFGSVAAGGLLALPGMMCTCCAAPVVAGLRERQASPGGAIAFWLGNSVLN
PATLVFMGFVLGWQWAGLRLVLGVAMVFGLGYVVNRLVTRAEAQTADARLVELVDQQRAGNPFVRWLSIFVRMAVRLVPE
YIVLILLLGAARAWLFPHVGPEIGNDIVWIAALAVAGMLFVIPTAGEVPIIQAMLSLGMGVGPAGALLMTLPPISVPSLA
MLARSFRPRVLTIVAVAVVAFGVLAGLLAVALGF

Sequences:

>Translated_354_residues
MTMTSTRPTSSPAASTWPIFVLLAVAGLFYVKWFPYYHRALTAASTHSIGASILMGTAASAPAPSWDAALGYALVYGKAI
WQAMVLGLLLGSAVQALLPAYWVARLLGKSGFGSVAAGGLLALPGMMCTCCAAPVVAGLRERQASPGGAIAFWLGNSVLN
PATLVFMGFVLGWQWAGLRLVLGVAMVFGLGYVVNRLVTRAEAQTADARLVELVDQQRAGNPFVRWLSIFVRMAVRLVPE
YIVLILLLGAARAWLFPHVGPEIGNDIVWIAALAVAGMLFVIPTAGEVPIIQAMLSLGMGVGPAGALLMTLPPISVPSLA
MLARSFRPRVLTIVAVAVVAFGVLAGLLAVALGF
>Mature_353_residues
TMTSTRPTSSPAASTWPIFVLLAVAGLFYVKWFPYYHRALTAASTHSIGASILMGTAASAPAPSWDAALGYALVYGKAIW
QAMVLGLLLGSAVQALLPAYWVARLLGKSGFGSVAAGGLLALPGMMCTCCAAPVVAGLRERQASPGGAIAFWLGNSVLNP
ATLVFMGFVLGWQWAGLRLVLGVAMVFGLGYVVNRLVTRAEAQTADARLVELVDQQRAGNPFVRWLSIFVRMAVRLVPEY
IVLILLLGAARAWLFPHVGPEIGNDIVWIAALAVAGMLFVIPTAGEVPIIQAMLSLGMGVGPAGALLMTLPPISVPSLAM
LARSFRPRVLTIVAVAVVAFGVLAGLLAVALGF

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0718 family [H]

Homologues:

Organism=Escherichia coli, GI1789541, Length=351, Percent_Identity=50.4273504273504, Blast_Score=314, Evalue=6e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005524 [H]

Pfam domain/function: PF03773 DUF318 [H]

EC number: NA

Molecular weight: Translated: 37039; Mature: 36908

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: PS01047 HMA_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMTSTRPTSSPAASTWPIFVLLAVAGLFYVKWFPYYHRALTAASTHSIGASILMGTAAS
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
APAPSWDAALGYALVYGKAIWQAMVLGLLLGSAVQALLPAYWVARLLGKSGFGSVAAGGL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCHH
LALPGMMCTCCAAPVVAGLRERQASPGGAIAFWLGNSVLNPATLVFMGFVLGWQWAGLRL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
VLGVAMVFGLGYVVNRLVTRAEAQTADARLVELVDQQRAGNPFVRWLSIFVRMAVRLVPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
YIVLILLLGAARAWLFPHVGPEIGNDIVWIAALAVAGMLFVIPTAGEVPIIQAMLSLGMG
HHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHCCC
VGPAGALLMTLPPISVPSLAMLARSFRPRVLTIVAVAVVAFGVLAGLLAVALGF
CCCHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TMTSTRPTSSPAASTWPIFVLLAVAGLFYVKWFPYYHRALTAASTHSIGASILMGTAAS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
APAPSWDAALGYALVYGKAIWQAMVLGLLLGSAVQALLPAYWVARLLGKSGFGSVAAGGL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCHH
LALPGMMCTCCAAPVVAGLRERQASPGGAIAFWLGNSVLNPATLVFMGFVLGWQWAGLRL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
VLGVAMVFGLGYVVNRLVTRAEAQTADARLVELVDQQRAGNPFVRWLSIFVRMAVRLVPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
YIVLILLLGAARAWLFPHVGPEIGNDIVWIAALAVAGMLFVIPTAGEVPIIQAMLSLGMG
HHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHCCC
VGPAGALLMTLPPISVPSLAMLARSFRPRVLTIVAVAVVAFGVLAGLLAVALGF
CCCHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]