Click here to switch to the map view.

The map label for this gene is ybaW [C]

Identifier: 186476366

GI number: 186476366

Start: 1826530

End: 1826982

Strand: Reverse

Name: ybaW [C]

Synonym: Bphy_1608

Alternate gene names: 186476366

Gene position: 1826982-1826530 (Counterclockwise)

Preceding gene: 186476367

Following gene: 186476365

Centisome position: 52.51

GC content: 62.69

Gene sequence:

>453_bases
ATGAACAAACCTGCTCCCGCGCCGCGCACGGCTTACCCGCACTTTCTTTGCATCGGTACGCGCTGGATGGACAACGATAT
CTACGGCCACGTGAACAACGTCGTCTATTACAGCTACTTCGACACGGTCGTGAACGAGTATCTGATTCGCACGGGCGCAC
TCGATATCGAACACAGCACGACGATCGGTCTCGTCGTCGAAACGCAGTGCAACTACTTCGCGCCCATCGTGTTTCCGGAT
CGTATCGATGCGGGGCTGCGCGTGGTGCGCCTCGGCGCATCGAGCGTGCGCTACGAAGTGGGGCTGTTCATGGAAGGCGA
CGCTCAACCTGCTGCGCAAGGTCATTTCGTGCACGTCTACGTGGATCGCGAGACGCGCCGCCCGGTCGCGCTGTCCGACG
CGCTGCGCGCCGCGCTCGAGCCGCTCGTCGTGCAAGCCGCGCGGGCGGACTGA

Upstream 100 bases:

>100_bases
ATTGCCACAAGACGAATCCGCGCGAAGCGACGGCCGACGATTACCGGCGCATGCTACAGGAGTCCATGTAGGCGCCGCAC
CTTCTTCAACCGAACGAGAC

Downstream 100 bases:

>100_bases
CGCGTGCAGCCGTTCGTGATCGACGCGCTGAACGGTGTGAGCTACGGCTTGCTGCTGTTCATGCTATCGGCGGGATTGAC
GCTGATTTTCAGCATGCTCG

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: Thioesterase; Thioesterase Family Protein; Thioesterase Superfamily; Thioesterase/Thiol Ester Dehydrase-Isomerase; Thioesterase Family Protein Domain Protein; 4-Hydroxybenzoyl-CoA Thioesterase; Thioesterase Protein; Acyl-CoA Thioesterase; Acyl-CoA Hydrolase/Thioesterase; Acyl-CoA Hydrolase

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MNKPAPAPRTAYPHFLCIGTRWMDNDIYGHVNNVVYYSYFDTVVNEYLIRTGALDIEHSTTIGLVVETQCNYFAPIVFPD
RIDAGLRVVRLGASSVRYEVGLFMEGDAQPAAQGHFVHVYVDRETRRPVALSDALRAALEPLVVQAARAD

Sequences:

>Translated_150_residues
MNKPAPAPRTAYPHFLCIGTRWMDNDIYGHVNNVVYYSYFDTVVNEYLIRTGALDIEHSTTIGLVVETQCNYFAPIVFPD
RIDAGLRVVRLGASSVRYEVGLFMEGDAQPAAQGHFVHVYVDRETRRPVALSDALRAALEPLVVQAARAD
>Mature_150_residues
MNKPAPAPRTAYPHFLCIGTRWMDNDIYGHVNNVVYYSYFDTVVNEYLIRTGALDIEHSTTIGLVVETQCNYFAPIVFPD
RIDAGLRVVRLGASSVRYEVGLFMEGDAQPAAQGHFVHVYVDRETRRPVALSDALRAALEPLVVQAARAD

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16757; Mature: 16757

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKPAPAPRTAYPHFLCIGTRWMDNDIYGHVNNVVYYSYFDTVVNEYLIRTGALDIEHST
CCCCCCCCCCCCCEEEEEECEECCCCCCEEECCEEEEEHHHHHHHHHHHHCCCEEECCCC
TIGLVVETQCNYFAPIVFPDRIDAGLRVVRLGASSVRYEVGLFMEGDAQPAAQGHFVHVY
EEEEEEECCCCEEEEEEECCCCCCCEEEEEECCCCEEEEEEEEEECCCCCCCCCCEEEEE
VDRETRRPVALSDALRAALEPLVVQAARAD
EECCCCCCCHHHHHHHHHHHHHHHHEECCC
>Mature Secondary Structure
MNKPAPAPRTAYPHFLCIGTRWMDNDIYGHVNNVVYYSYFDTVVNEYLIRTGALDIEHST
CCCCCCCCCCCCCEEEEEECEECCCCCCEEECCEEEEEHHHHHHHHHHHHCCCEEECCCC
TIGLVVETQCNYFAPIVFPDRIDAGLRVVRLGASSVRYEVGLFMEGDAQPAAQGHFVHVY
EEEEEEECCCCEEEEEEECCCCCCCEEEEEECCCCEEEEEEEEEECCCCCCCCCCEEEEE
VDRETRRPVALSDALRAALEPLVVQAARAD
EECCCCCCCHHHHHHHHHHHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA