| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is dhaT [H]
Identifier: 186476367
GI number: 186476367
Start: 1827012
End: 1828160
Strand: Reverse
Name: dhaT [H]
Synonym: Bphy_1609
Alternate gene names: 186476367
Gene position: 1828160-1827012 (Counterclockwise)
Preceding gene: 186476368
Following gene: 186476366
Centisome position: 52.55
GC content: 66.84
Gene sequence:
>1149_bases ATGGCCTACATCTACTATCTGACGCACATTCATCTCGGTTACGATGCGCTCGCGCAATTGCCCGCCGAATGCGAGCGGGC GGGCATCAAGCGGCCGCTCGTCGTAACGGATAAGGGCGTGATGGCGGCGGGCGTCGCGCGACAGGCGATCGACGCGTTGC CCATGCGCGACGTGCCCATCTTCGACGACACGCCGTCGAACCCGACGGAAGCGATGGTGATGGCGGCCGTGCAGCGCTAC CGCGACGAGCGCTGCGACGGGCTGGTCGCGATTGGCGGCGGCTCGTCGATCGATCTGGCCAAAGGCGTTGCGATCATGGC GACGCATCCGGGCGCGATGACGGACTACGCGACGATCGAAGGCGGCAGCGCGAAGATCACCGACAAGGCCGCGCCGCTGA TCGCGATTCCGACGACGGCGGGCACGGGCAGCGAAGTGGCGCGCGGCGCGATCGTGATCCTGAACGATGGCCGCAAGCTG GGCTTCCACTCGTGGCATCTACTGCCGAAGGCGGCGATCTGCGACCCCGGGCTCACGCTCGGCCTGCCGCCGATGCTCAC GGCCGCCACCGGCATGGACGCGATCGCGCATTGCATCGAAACGTTTCTCGCGCCGTCGTTCAATCCGCCAGCCGACGGCA TCGCGCTCGACGGCCTGGAGCGTGCATGGGCCAACATCGAACTCGCGACGCACGACGGCGGGCACCGCGACGCGCGCCTG AACATGATGAGCGCGTCGATGCAGGGCGCGATGGCCTTCCAGAAAGGGCTCGGCTGCGTGCATTCGCTGTCGCATCCGCT CGGCGGCGTGCCCGTCAATGGTCGCACGTCGCTGCATCACGGCACGCTGAACGCCGTCGTGCTGCCCGCCGTGCTGCGCT TCAACGAAAGCGCGGAGACGGTTGTCGCGAATCGCCGTTATGCGCGCATGCGCCGCGTGATGAATCTGCCCGAGCATGCC GATCTCGCGCTGGCGCTGCACGACATGACGGCGCGGCTTGGGTTGCCGACGGGTCTGCGGAAAATGGGCGTCGACGAAAG CGCGTTCGACAAGGTGATCAAGGGCGCGCTCGCCGATCATTGCCACAAGACGAATCCGCGCGAAGCGACGGCCGACGATT ACCGGCGCATGCTACAGGAGTCCATGTAG
Upstream 100 bases:
>100_bases CGACGTGCGCGCACTGTGCGCAGCTTGAGGCAGACGCACCTGTGCGCTTCGCCGTCCAGGTGATCCGCGACCGGTAGCCA AAGAAAGGAGACGCATCGGC
Downstream 100 bases:
>100_bases GCGCCGCACCTTCTTCAACCGAACGAGACATGAACAAACCTGCTCCCGCGCCGCGCACGGCTTACCCGCACTTTCTTTGC ATCGGTACGCGCTGGATGGA
Product: alcohol dehydrogenase
Products: NA
Alternate protein names: 1,3-propanediol oxidoreductase; 3-hydroxypropionaldehyde reductase [H]
Number of amino acids: Translated: 382; Mature: 381
Protein sequence:
>382_residues MAYIYYLTHIHLGYDALAQLPAECERAGIKRPLVVTDKGVMAAGVARQAIDALPMRDVPIFDDTPSNPTEAMVMAAVQRY RDERCDGLVAIGGGSSIDLAKGVAIMATHPGAMTDYATIEGGSAKITDKAAPLIAIPTTAGTGSEVARGAIVILNDGRKL GFHSWHLLPKAAICDPGLTLGLPPMLTAATGMDAIAHCIETFLAPSFNPPADGIALDGLERAWANIELATHDGGHRDARL NMMSASMQGAMAFQKGLGCVHSLSHPLGGVPVNGRTSLHHGTLNAVVLPAVLRFNESAETVVANRRYARMRRVMNLPEHA DLALALHDMTARLGLPTGLRKMGVDESAFDKVIKGALADHCHKTNPREATADDYRRMLQESM
Sequences:
>Translated_382_residues MAYIYYLTHIHLGYDALAQLPAECERAGIKRPLVVTDKGVMAAGVARQAIDALPMRDVPIFDDTPSNPTEAMVMAAVQRY RDERCDGLVAIGGGSSIDLAKGVAIMATHPGAMTDYATIEGGSAKITDKAAPLIAIPTTAGTGSEVARGAIVILNDGRKL GFHSWHLLPKAAICDPGLTLGLPPMLTAATGMDAIAHCIETFLAPSFNPPADGIALDGLERAWANIELATHDGGHRDARL NMMSASMQGAMAFQKGLGCVHSLSHPLGGVPVNGRTSLHHGTLNAVVLPAVLRFNESAETVVANRRYARMRRVMNLPEHA DLALALHDMTARLGLPTGLRKMGVDESAFDKVIKGALADHCHKTNPREATADDYRRMLQESM >Mature_381_residues AYIYYLTHIHLGYDALAQLPAECERAGIKRPLVVTDKGVMAAGVARQAIDALPMRDVPIFDDTPSNPTEAMVMAAVQRYR DERCDGLVAIGGGSSIDLAKGVAIMATHPGAMTDYATIEGGSAKITDKAAPLIAIPTTAGTGSEVARGAIVILNDGRKLG FHSWHLLPKAAICDPGLTLGLPPMLTAATGMDAIAHCIETFLAPSFNPPADGIALDGLERAWANIELATHDGGHRDARLN MMSASMQGAMAFQKGLGCVHSLSHPLGGVPVNGRTSLHHGTLNAVVLPAVLRFNESAETVVANRRYARMRRVMNLPEHAD LALALHDMTARLGLPTGLRKMGVDESAFDKVIKGALADHCHKTNPREATADDYRRMLQESM
Specific function: Most active with substrates containing two primary alcohol groups separated by one or two carbon atoms. In the physiological direction, 3-hydroxypropionaldehyde is the preferred substrate [H]
COG id: COG1454
COG function: function code C; Alcohol dehydrogenase, class IV
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI133922590, Length=421, Percent_Identity=25.41567695962, Blast_Score=92, Evalue=1e-18, Organism=Escherichia coli, GI48994951, Length=398, Percent_Identity=33.6683417085427, Blast_Score=185, Evalue=4e-48, Organism=Escherichia coli, GI1789163, Length=375, Percent_Identity=31.7333333333333, Blast_Score=158, Evalue=7e-40, Organism=Escherichia coli, GI87082107, Length=359, Percent_Identity=31.4763231197772, Blast_Score=154, Evalue=1e-38, Organism=Escherichia coli, GI1787493, Length=389, Percent_Identity=29.305912596401, Blast_Score=135, Evalue=3e-33, Organism=Escherichia coli, GI1789386, Length=388, Percent_Identity=29.8969072164948, Blast_Score=113, Evalue=3e-26, Organism=Caenorhabditis elegans, GI17537053, Length=388, Percent_Identity=26.2886597938144, Blast_Score=106, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6321181, Length=376, Percent_Identity=33.7765957446808, Blast_Score=194, Evalue=2e-50, Organism=Drosophila melanogaster, GI24657991, Length=425, Percent_Identity=29.4117647058824, Blast_Score=117, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001670 - InterPro: IPR018211 [H]
Pfam domain/function: PF00465 Fe-ADH [H]
EC number: =1.1.1.202 [H]
Molecular weight: Translated: 40646; Mature: 40515
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: PS00913 ADH_IRON_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYIYYLTHIHLGYDALAQLPAECERAGIKRPLVVTDKGVMAAGVARQAIDALPMRDVPI CEEEEEEEEECCCHHHHHHCHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCC FDDTPSNPTEAMVMAAVQRYRDERCDGLVAIGGGSSIDLAKGVAIMATHPGAMTDYATIE CCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHCCEEEEEECCCCCCCEEEEC GGSAKITDKAAPLIAIPTTAGTGSEVARGAIVILNDGRKLGFHSWHLLPKAAICDPGLTL CCCEEEECCCCCEEEEECCCCCCHHHHCCEEEEEECCCEECCCHHCCCCCHHHCCCCCCC GLPPMLTAATGMDAIAHCIETFLAPSFNPPADGIALDGLERAWANIELATHDGGHRDARL CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHEEEEEECCCCCCCCEE NMMSASMQGAMAFQKGLGCVHSLSHPLGGVPVNGRTSLHHGTLNAVVLPAVLRFNESAET HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHH VVANRRYARMRRVMNLPEHADLALALHDMTARLGLPTGLRKMGVDESAFDKVIKGALADH HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHH CHKTNPREATADDYRRMLQESM HCCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure AYIYYLTHIHLGYDALAQLPAECERAGIKRPLVVTDKGVMAAGVARQAIDALPMRDVPI EEEEEEEEECCCHHHHHHCHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCC FDDTPSNPTEAMVMAAVQRYRDERCDGLVAIGGGSSIDLAKGVAIMATHPGAMTDYATIE CCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHCCEEEEEECCCCCCCEEEEC GGSAKITDKAAPLIAIPTTAGTGSEVARGAIVILNDGRKLGFHSWHLLPKAAICDPGLTL CCCEEEECCCCCEEEEECCCCCCHHHHCCEEEEEECCCEECCCHHCCCCCHHHCCCCCCC GLPPMLTAATGMDAIAHCIETFLAPSFNPPADGIALDGLERAWANIELATHDGGHRDARL CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHEEEEEECCCCCCCCEE NMMSASMQGAMAFQKGLGCVHSLSHPLGGVPVNGRTSLHHGTLNAVVLPAVLRFNESAET HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHH VVANRRYARMRRVMNLPEHADLALALHDMTARLGLPTGLRKMGVDESAFDKVIKGALADH HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHH CHKTNPREATADDYRRMLQESM HCCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7721705 [H]