Click here to switch to the map view.

The map label for this gene is tse [H]

Identifier: 186476344

GI number: 186476344

Start: 1796090

End: 1797751

Strand: Reverse

Name: tse [H]

Synonym: Bphy_1586

Alternate gene names: 186476344

Gene position: 1797751-1796090 (Counterclockwise)

Preceding gene: 186476347

Following gene: 186476339

Centisome position: 51.67

GC content: 64.02

Gene sequence:

>1662_bases
ATGAAAGCAGTTACGCTGGGTGGCCAGCCGGGCGCGGGGTTCGTACCGGATGGCAAAGCGGCCGGGGGGCCGGCGAGTCC
GGGCAAGCGGCGCGTCAAGCTGCGCGGCCGGTCCGTGAAGACGACCTTGCGGCTCGCGTTTGCGGTATTGCTGGTGGGGA
CGTTGGCAGTCGGCGTGTTTTCGCTGGCGCAGATCAGCCGCCTGAACGGGCAGATGCGCTCGATCTATGAGCAAGGCCAT
GTCGCGAGCCGGGCCGCCGAGGAAGCGCGCGGCTATCTTCTGCGCGCGAGCCGCGCCCAGAAGATGCTATTGACGGCGAC
GACCGCCAAGGAGCGCGACGAACTCGGCGCCGATATCGACAAGGGGCTGACCGGTCTGTCGGCCGAACTGAATACGCTTC
AGCAATATGCGGACTCTGCAGAAGCCGGCGCGCAGCAGAAGAAGTTCGCTGACGCGATCGGCGTGTGGAGCGCCCATCTG
CGCGATTTCGTGACGCTCGTGAAGGCGCAGCCGCTCGACCTGTCGCAGATGAACTGGCAGGTCGGCACGACGGATGTGTC
GTTGCTCGTCGAAACGGGCAAGCTCGAAAAGCTGGTTGATGAACTCGTCGCGCAACGCGGCAAGGCGGCGAAAGCGACCA
TCGACGCGTCGTCGTTCATTTATCAATCGTCGTTCGTGATGATGGCTGTGATGACCGTCGCGCTGATCGTGCTTGCGTTC
GTGATCAGCGAGTGGGTCGTGCGGCGCCTCGCGCGTCAGCTCGGCGGAGAGCCTGTGTACGCGAAGGAAATCGCGAGCCG
CATCGCGGCTGGCGATCTGTCGAACGACATCGTGCTCGGCGAACGCGACAACTCGAGCATGCTGTCGGCGCTGCGGGACA
TGCAGAACGGTCTGTCGTCGACGGTCGCGCATATCGCATCGAGTGCCGAGGCGATCGCGGCAGCCTCTGGGCAGATATCG
ATGGGCAATCTCGATCTGTCGCAACGTACCGAACAGCAGGCGATGGCGCTCGAACGCACGGCGAGCAGCATGGAAGAACT
CACCTCGACGGTGCGTCAGAACGCGGACAATGCGAAGCAGGCGCGCACGCTGGCCGACAATGCGTCGGCGATCGCGGAGA
AGGGCGGCGACGTGGTGGGCCGCGTGGTCGCGACGATGGGCGAGATCAACGACAGCGCGAAGAGCATCGGCGACATCATC
GGGGTGATCGAGGGGATTGCGTTCCAGACCAACATTCTTGCGCTGAATGCGGCCGTCGAAGCGGCGCGCGCAGGCGAGGA
GGGGCGCGGTTTCTCGGTGGTGGCGGGTGAGGTGCGCAACCTGGCGCAGCGCAGCGCGTCGGCTGCGAAGGAGATCAAGG
GATTGATCAGCGCGTCGGTGGAGCGTGCTAGCAACGGCTCGCAGCTGGCGCAGGACGCGGGGCAGACGATGGACGAAGTC
GTCAAGGCCGTAAAGCGCGTGACGGATATCATGGGAGAGATCTCGGCTGCTTCCGCCGAGCAGAGTTCGGGCATCGAAGA
GATCAATCTCGCTGTATCGCAGATGGATGCTGGTACCCAGCAGAATGCGGCTCTCGTCGAGCAGGCGACTGCCGCTGCTC
GGGCGCTTGATGATCAGGCTCACGCCTTGAAGGCTGCTGTCGCCAAATTTTCTTTACGGTAG

Upstream 100 bases:

>100_bases
GGCCTCAAGAACGTCACCGGCGATGCCGTCATCCGGAGAGAAAAGCAGCGATGCCGGAACCGACCTTTCCGGCAGTGGCA
ATACGAGTGGGGACGACAAC

Downstream 100 bases:

>100_bases
GCCGTTTTGCGGACCGCCGGCATTCGCTTCTGGTTGGCTGGCGTTGCCCCGCATAGGGGCAACACCAGCCAACCGGAAAC
ACAACGCGGATGCCAGCAAA

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 553; Mature: 553

Protein sequence:

>553_residues
MKAVTLGGQPGAGFVPDGKAAGGPASPGKRRVKLRGRSVKTTLRLAFAVLLVGTLAVGVFSLAQISRLNGQMRSIYEQGH
VASRAAEEARGYLLRASRAQKMLLTATTAKERDELGADIDKGLTGLSAELNTLQQYADSAEAGAQQKKFADAIGVWSAHL
RDFVTLVKAQPLDLSQMNWQVGTTDVSLLVETGKLEKLVDELVAQRGKAAKATIDASSFIYQSSFVMMAVMTVALIVLAF
VISEWVVRRLARQLGGEPVYAKEIASRIAAGDLSNDIVLGERDNSSMLSALRDMQNGLSSTVAHIASSAEAIAAASGQIS
MGNLDLSQRTEQQAMALERTASSMEELTSTVRQNADNAKQARTLADNASAIAEKGGDVVGRVVATMGEINDSAKSIGDII
GVIEGIAFQTNILALNAAVEAARAGEEGRGFSVVAGEVRNLAQRSASAAKEIKGLISASVERASNGSQLAQDAGQTMDEV
VKAVKRVTDIMGEISAASAEQSSGIEEINLAVSQMDAGTQQNAALVEQATAAARALDDQAHALKAAVAKFSLR

Sequences:

>Translated_553_residues
MKAVTLGGQPGAGFVPDGKAAGGPASPGKRRVKLRGRSVKTTLRLAFAVLLVGTLAVGVFSLAQISRLNGQMRSIYEQGH
VASRAAEEARGYLLRASRAQKMLLTATTAKERDELGADIDKGLTGLSAELNTLQQYADSAEAGAQQKKFADAIGVWSAHL
RDFVTLVKAQPLDLSQMNWQVGTTDVSLLVETGKLEKLVDELVAQRGKAAKATIDASSFIYQSSFVMMAVMTVALIVLAF
VISEWVVRRLARQLGGEPVYAKEIASRIAAGDLSNDIVLGERDNSSMLSALRDMQNGLSSTVAHIASSAEAIAAASGQIS
MGNLDLSQRTEQQAMALERTASSMEELTSTVRQNADNAKQARTLADNASAIAEKGGDVVGRVVATMGEINDSAKSIGDII
GVIEGIAFQTNILALNAAVEAARAGEEGRGFSVVAGEVRNLAQRSASAAKEIKGLISASVERASNGSQLAQDAGQTMDEV
VKAVKRVTDIMGEISAASAEQSSGIEEINLAVSQMDAGTQQNAALVEQATAAARALDDQAHALKAAVAKFSLR
>Mature_553_residues
MKAVTLGGQPGAGFVPDGKAAGGPASPGKRRVKLRGRSVKTTLRLAFAVLLVGTLAVGVFSLAQISRLNGQMRSIYEQGH
VASRAAEEARGYLLRASRAQKMLLTATTAKERDELGADIDKGLTGLSAELNTLQQYADSAEAGAQQKKFADAIGVWSAHL
RDFVTLVKAQPLDLSQMNWQVGTTDVSLLVETGKLEKLVDELVAQRGKAAKATIDASSFIYQSSFVMMAVMTVALIVLAF
VISEWVVRRLARQLGGEPVYAKEIASRIAAGDLSNDIVLGERDNSSMLSALRDMQNGLSSTVAHIASSAEAIAAASGQIS
MGNLDLSQRTEQQAMALERTASSMEELTSTVRQNADNAKQARTLADNASAIAEKGGDVVGRVVATMGEINDSAKSIGDII
GVIEGIAFQTNILALNAAVEAARAGEEGRGFSVVAGEVRNLAQRSASAAKEIKGLISASVERASNGSQLAQDAGQTMDEV
VKAVKRVTDIMGEISAASAEQSSGIEEINLAVSQMDAGTQQNAALVEQATAAARALDDQAHALKAAVAKFSLR

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=286, Percent_Identity=60.1398601398601, Blast_Score=296, Evalue=2e-81,
Organism=Escherichia coli, GI1788194, Length=336, Percent_Identity=51.7857142857143, Blast_Score=288, Evalue=6e-79,
Organism=Escherichia coli, GI2367378, Length=346, Percent_Identity=52.3121387283237, Blast_Score=276, Evalue=3e-75,
Organism=Escherichia coli, GI1787690, Length=331, Percent_Identity=51.6616314199396, Blast_Score=274, Evalue=1e-74,
Organism=Escherichia coli, GI1789453, Length=371, Percent_Identity=34.2318059299191, Blast_Score=186, Evalue=3e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 57882; Mature: 57882

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2 ; PS00284 SERPIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAVTLGGQPGAGFVPDGKAAGGPASPGKRRVKLRGRSVKTTLRLAFAVLLVGTLAVGVF
CCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
SLAQISRLNGQMRSIYEQGHVASRAAEEARGYLLRASRAQKMLLTATTAKERDELGADID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
KGLTGLSAELNTLQQYADSAEAGAQQKKFADAIGVWSAHLRDFVTLVKAQPLDLSQMNWQ
HCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCE
VGTTDVSLLVETGKLEKLVDELVAQRGKAAKATIDASSFIYQSSFVMMAVMTVALIVLAF
ECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
VISEWVVRRLARQLGGEPVYAKEIASRIAAGDLSNDIVLGERDNSSMLSALRDMQNGLSS
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHH
TVAHIASSAEAIAAASGQISMGNLDLSQRTEQQAMALERTASSMEELTSTVRQNADNAKQ
HHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
ARTLADNASAIAEKGGDVVGRVVATMGEINDSAKSIGDIIGVIEGIAFQTNILALNAAVE
HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AARAGEEGRGFSVVAGEVRNLAQRSASAAKEIKGLISASVERASNGSQLAQDAGQTMDEV
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
VKAVKRVTDIMGEISAASAEQSSGIEEINLAVSQMDAGTQQNAALVEQATAAARALDDQA
HHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
HALKAAVAKFSLR
HHHHHHHHHHCCC
>Mature Secondary Structure
MKAVTLGGQPGAGFVPDGKAAGGPASPGKRRVKLRGRSVKTTLRLAFAVLLVGTLAVGVF
CCEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
SLAQISRLNGQMRSIYEQGHVASRAAEEARGYLLRASRAQKMLLTATTAKERDELGADID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
KGLTGLSAELNTLQQYADSAEAGAQQKKFADAIGVWSAHLRDFVTLVKAQPLDLSQMNWQ
HCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCE
VGTTDVSLLVETGKLEKLVDELVAQRGKAAKATIDASSFIYQSSFVMMAVMTVALIVLAF
ECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
VISEWVVRRLARQLGGEPVYAKEIASRIAAGDLSNDIVLGERDNSSMLSALRDMQNGLSS
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHH
TVAHIASSAEAIAAASGQISMGNLDLSQRTEQQAMALERTASSMEELTSTVRQNADNAKQ
HHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
ARTLADNASAIAEKGGDVVGRVVATMGEINDSAKSIGDIIGVIEGIAFQTNILALNAAVE
HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AARAGEEGRGFSVVAGEVRNLAQRSASAAKEIKGLISASVERASNGSQLAQDAGQTMDEV
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
VKAVKRVTDIMGEISAASAEQSSGIEEINLAVSQMDAGTQQNAALVEQATAAARALDDQA
HHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
HALKAAVAKFSLR
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]