| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is pucI [H]
Identifier: 186476291
GI number: 186476291
Start: 1730688
End: 1732199
Strand: Reverse
Name: pucI [H]
Synonym: Bphy_1533
Alternate gene names: 186476291
Gene position: 1732199-1730688 (Counterclockwise)
Preceding gene: 186476292
Following gene: 186476290
Centisome position: 49.79
GC content: 61.9
Gene sequence:
>1512_bases ATGAAGCAGACAGCGCAATCCGCCGACGCGTCTTACGCGGCCGGCGCGCACGGCAGCAGTCTCTATAACGACGACCTTGC GCCGACTGGCCCGGCGCAGCGCACGTGGAAGTGGTATCACTTCGCCGCGCTTTGGGTCGGCATGGTGATGAACATCGCGT CGTACATGCTCGCGGCAGGGCTGACGGAAGAGGGCATGTCGCCGTGGCAGGCGGTGTTGACCGTGCTGCTCGGGAACATG ATCGTGCTGGTTCCGATGCTGCTGATCGGTCATGCGGGCGCGAAGCACGGCATTCCGTACGCGGTGCTCGTGCGTTCGTC ATTCGGCACGCAGGGCGCGAAACTGCCCGCGATGTTGCGCGCGATCGTCGCGTGCGGCTGGTACGGCATCCAGACGTGGC TCGGTGGCAGCGCGATCTATACGCTGCTCAACATCCTGACGGGCAATGCGCTGCACGGCGCGGCGCTGCCGTTTCTCGAC ATCTCGATTGGGCAGTTCGCGTGCTTTCTCGCGTTCTGGGCGTTGCAGATTTATTTCATCGTGCATGGCACCGATTCGAT TCGCTGGCTCGAAAGCTGGTCCGCGCCGATCAAGGTGGTGATGTGCATCGCGCTCGTGTGGTGGGCGACGTCCAGGGCGG GCGGCGTCGGGTCGATGCTCTCGGCGCCTTCGCAGTTCGTGCCGGGCGGCAAGAAGGAGGGCCTGTTTTGGCTCACGTTC TGGCCCGGGCTTACGGCAATGGTTGGCTTCTGGGCGACGCTTGCGTTGAATATCCCTGACTTCACGCGTTTCGCCAGGAC GCAGCGGGATCAGATCGTCGGGCAGTCGATCGGCTTGCCGGTGCCGATGGCTTTGCTGTCGGTGATCTCCGTGGTCGTCA CGTCGGCGACGGTTGTGATCTACGGCAAGGCGATCTGGGACCCGATCGATCTGACGAGCCGCATGACGGGTGTCGGCGTC GGCGTTGCACTCATCATCCTCACGCTCGATACGATGTGCTGCAATCTCGCGGCGAATCTTGTGGGTCCCGCGTATGATTT TTCGAGCCTCTGGCCTAAGGGAATATCGTACCGCACGGGCGGGCTGATGACGGCGGTCATTGCGATCGTGATGATGCCGT GGAAGATTCTCGCGACCACCCAAGGCTATATCTTTACGTGGCTCGTGGGTTACTCGGCGTTGCTTGGACCTGTCGCAGGC ATCCTGATGGTCGATTACTTCCTCATTCGCGGCACGCGGCTCGACTCGCACGAACTTTTCGACGAACACGGCGAATACAG CTATACGGGCGGCTGGAACCTGGCAGCCGTCGCCGCGCTGGTGATCGGCGTGGTTCCGAATCTGCCCGGCTTTTTGCATA CGGCGTTTCCCGCATCGTTTCCGAACGTGCCCGCATTCTTCAATACGCTCTATACCTATGCATGGTTCGTCGGACTGGCG TTGGCATCCATTGTGTATGGCACGTGGATGAAGCTGCGCCGCAATCCCGGCGCGAGCATGGCGAGTGCGTGA
Upstream 100 bases:
>100_bases GCCTGAAACGGCAGACGCACGGCACCCCGCCAAGGCAGCCTGAAAAAAGCACGCTGATAAGGGCACCCCAGTCAACGAGC GGTCAAGTGGAGAACCATCG
Downstream 100 bases:
>100_bases TGTGATTCGATGTTTGACCGAGGAGGCAAGCGATGACAACTCTTATTCGCGGCGGCACGGTGATCGATGCCGACCGCACG CATAGAGCCGACGTATTGAT
Product: NCS1 nucleoside transporter
Products: NA
Alternate protein names: Allantoin transport protein [H]
Number of amino acids: Translated: 503; Mature: 503
Protein sequence:
>503_residues MKQTAQSADASYAAGAHGSSLYNDDLAPTGPAQRTWKWYHFAALWVGMVMNIASYMLAAGLTEEGMSPWQAVLTVLLGNM IVLVPMLLIGHAGAKHGIPYAVLVRSSFGTQGAKLPAMLRAIVACGWYGIQTWLGGSAIYTLLNILTGNALHGAALPFLD ISIGQFACFLAFWALQIYFIVHGTDSIRWLESWSAPIKVVMCIALVWWATSRAGGVGSMLSAPSQFVPGGKKEGLFWLTF WPGLTAMVGFWATLALNIPDFTRFARTQRDQIVGQSIGLPVPMALLSVISVVVTSATVVIYGKAIWDPIDLTSRMTGVGV GVALIILTLDTMCCNLAANLVGPAYDFSSLWPKGISYRTGGLMTAVIAIVMMPWKILATTQGYIFTWLVGYSALLGPVAG ILMVDYFLIRGTRLDSHELFDEHGEYSYTGGWNLAAVAALVIGVVPNLPGFLHTAFPASFPNVPAFFNTLYTYAWFVGLA LASIVYGTWMKLRRNPGASMASA
Sequences:
>Translated_503_residues MKQTAQSADASYAAGAHGSSLYNDDLAPTGPAQRTWKWYHFAALWVGMVMNIASYMLAAGLTEEGMSPWQAVLTVLLGNM IVLVPMLLIGHAGAKHGIPYAVLVRSSFGTQGAKLPAMLRAIVACGWYGIQTWLGGSAIYTLLNILTGNALHGAALPFLD ISIGQFACFLAFWALQIYFIVHGTDSIRWLESWSAPIKVVMCIALVWWATSRAGGVGSMLSAPSQFVPGGKKEGLFWLTF WPGLTAMVGFWATLALNIPDFTRFARTQRDQIVGQSIGLPVPMALLSVISVVVTSATVVIYGKAIWDPIDLTSRMTGVGV GVALIILTLDTMCCNLAANLVGPAYDFSSLWPKGISYRTGGLMTAVIAIVMMPWKILATTQGYIFTWLVGYSALLGPVAG ILMVDYFLIRGTRLDSHELFDEHGEYSYTGGWNLAAVAALVIGVVPNLPGFLHTAFPASFPNVPAFFNTLYTYAWFVGLA LASIVYGTWMKLRRNPGASMASA >Mature_503_residues MKQTAQSADASYAAGAHGSSLYNDDLAPTGPAQRTWKWYHFAALWVGMVMNIASYMLAAGLTEEGMSPWQAVLTVLLGNM IVLVPMLLIGHAGAKHGIPYAVLVRSSFGTQGAKLPAMLRAIVACGWYGIQTWLGGSAIYTLLNILTGNALHGAALPFLD ISIGQFACFLAFWALQIYFIVHGTDSIRWLESWSAPIKVVMCIALVWWATSRAGGVGSMLSAPSQFVPGGKKEGLFWLTF WPGLTAMVGFWATLALNIPDFTRFARTQRDQIVGQSIGLPVPMALLSVISVVVTSATVVIYGKAIWDPIDLTSRMTGVGV GVALIILTLDTMCCNLAANLVGPAYDFSSLWPKGISYRTGGLMTAVIAIVMMPWKILATTQGYIFTWLVGYSALLGPVAG ILMVDYFLIRGTRLDSHELFDEHGEYSYTGGWNLAAVAALVIGVVPNLPGFLHTAFPASFPNVPAFFNTLYTYAWFVGLA LASIVYGTWMKLRRNPGASMASA
Specific function: Transport of allantoin [H]
COG id: COG1953
COG function: function code FH; Cytosine/uracil/thiamine/allantoin permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine-cytosine permease family [H]
Homologues:
Organism=Escherichia coli, GI87081749, Length=478, Percent_Identity=28.8702928870293, Blast_Score=195, Evalue=5e-51, Organism=Saccharomyces cerevisiae, GI6322219, Length=449, Percent_Identity=28.2850779510022, Blast_Score=194, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6319429, Length=485, Percent_Identity=28.2474226804124, Blast_Score=192, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6319495, Length=450, Percent_Identity=27.3333333333333, Blast_Score=186, Evalue=6e-48, Organism=Saccharomyces cerevisiae, GI6324645, Length=447, Percent_Identity=24.1610738255034, Blast_Score=139, Evalue=1e-33, Organism=Saccharomyces cerevisiae, GI6323266, Length=444, Percent_Identity=22.7477477477477, Blast_Score=122, Evalue=1e-28, Organism=Saccharomyces cerevisiae, GI6324766, Length=452, Percent_Identity=22.1238938053097, Blast_Score=120, Evalue=5e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001248 - InterPro: IPR012681 [H]
Pfam domain/function: PF02133 Transp_cyt_pur [H]
EC number: NA
Molecular weight: Translated: 54179; Mature: 54179
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQTAQSADASYAAGAHGSSLYNDDLAPTGPAQRTWKWYHFAALWVGMVMNIASYMLAAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC LTEEGMSPWQAVLTVLLGNMIVLVPMLLIGHAGAKHGIPYAVLVRSSFGTQGAKLPAMLR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHH AIVACGWYGIQTWLGGSAIYTLLNILTGNALHGAALPFLDISIGQFACFLAFWALQIYFI HHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHE VHGTDSIRWLESWSAPIKVVMCIALVWWATSRAGGVGSMLSAPSQFVPGGKKEGLFWLTF EECCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHCCCCCCCCEEEEEE WPGLTAMVGFWATLALNIPDFTRFARTQRDQIVGQSIGLPVPMALLSVISVVVTSATVVI HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEE YGKAIWDPIDLTSRMTGVGVGVALIILTLDTMCCNLAANLVGPAYDFSSLWPKGISYRTG EEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCC GLMTAVIAIVMMPWKILATTQGYIFTWLVGYSALLGPVAGILMVDYFLIRGTRLDSHELF HHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH DEHGEYSYTGGWNLAAVAALVIGVVPNLPGFLHTAFPASFPNVPAFFNTLYTYAWFVGLA HHCCCEEECCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH LASIVYGTWMKLRRNPGASMASA HHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MKQTAQSADASYAAGAHGSSLYNDDLAPTGPAQRTWKWYHFAALWVGMVMNIASYMLAAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC LTEEGMSPWQAVLTVLLGNMIVLVPMLLIGHAGAKHGIPYAVLVRSSFGTQGAKLPAMLR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHH AIVACGWYGIQTWLGGSAIYTLLNILTGNALHGAALPFLDISIGQFACFLAFWALQIYFI HHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHE VHGTDSIRWLESWSAPIKVVMCIALVWWATSRAGGVGSMLSAPSQFVPGGKKEGLFWLTF EECCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHCCCCCCCCEEEEEE WPGLTAMVGFWATLALNIPDFTRFARTQRDQIVGQSIGLPVPMALLSVISVVVTSATVVI HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEE YGKAIWDPIDLTSRMTGVGVGVALIILTLDTMCCNLAANLVGPAYDFSSLWPKGISYRTG EEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCC GLMTAVIAIVMMPWKILATTQGYIFTWLVGYSALLGPVAGILMVDYFLIRGTRLDSHELF HHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH DEHGEYSYTGGWNLAAVAALVIGVVPNLPGFLHTAFPASFPNVPAFFNTLYTYAWFVGLA HHCCCEEECCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH LASIVYGTWMKLRRNPGASMASA HHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377; 11344136 [H]