| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is dht [H]
Identifier: 186476290
GI number: 186476290
Start: 1729204
End: 1730655
Strand: Reverse
Name: dht [H]
Synonym: Bphy_1532
Alternate gene names: 186476290
Gene position: 1730655-1729204 (Counterclockwise)
Preceding gene: 186476291
Following gene: 186476289
Centisome position: 49.74
GC content: 61.29
Gene sequence:
>1452_bases ATGACAACTCTTATTCGCGGCGGCACGGTGATCGATGCCGACCGCACGCATAGAGCCGACGTATTGATTGCGGACCCGCA GGACGGCGGCACGATCCTGCAGGTCGATCGCACGATCGAGCCGCCCGCGGGTGCGCGCATCGTTGACGCTCACGATCAGT ATGTGATGCCGGGCGGCATCGATCCGCACACGCACATGGAACTGCCTTTCATGGGCACGACGGCGAGCGACGACTTCTAC ACGGGCACGGCGGCGGGGCTGTCGGGCGGCACGACGAGCATCATCGACTTCGTGATTCCGAGCCCGAAGCAGCCGCTGAT GGACGCATTTAATGAATGGCGCGGCTGGGCGGAAAAGGCATCGGCCGATTATGGCTTTCATGTGGCTGTGACGTGGTGGG ACGACTCCGTGTATCGCGACATGGGCACGCTCGTCAACGAGCATGGCGTGTCGAGCTTCAAGCACTTCATGGCCTACAAG AACGCGATCATGGCTGACGACGAAGTGCTCGTGAACAGCTTCTCGCGTTCGCTAGAACTCGGTGCGCTGCCGACTGTGCA TGCGGAAAACGGCGAGCTCGTATTCCAGTTGCAGAAGCAGCTATTGGCGAAGGGTTTCAGGGGGCCGGAGGCGCATCCGC TGTCGCGTCCGCCCGAAGTGGAGGGCGAGGCCGCGAATCGCGCGATCCGCATTGCGCAAGTGCTCGGCGTGCCCGTGTAC ATCGTGCATGTGTCATCGAGAGAAGCGGTCGAAGCGATTTCACGCGCGCGCAACGAAGGCCAGCGCGTATTTGGGGAGGT GCTGCCGGGGCATCTTGTGATCGACGAAAGCGTATATCGCGATCCCGACTGGACGCGTGCCGCCGCGCACGTGATGAGTC CGCCGTTTCGCACGCGCGAGCATCGCGAGGCGCTATGGCGCGGCTTGCAAGCGGGCCAGTTGCATACGACGGCCACCGAT CATTGTGTGTTCTGCGCGTCCCAGAAGGCGATGGGGCGCGAGGATTTCACGAAGATTCCGAACGGGTGCGGTGGGATTGA AGACCGGATGTCGGTGTTGTGGCATGAGGGCGTGAATCAAGGGCGCGTTACACCGAATGAGTTCGTTCGTATTACGTCTG CGAATGCTGCCCAGATTTTCAATCTTTATCCCCGCAAGGGCGCTGTGCAGGCCGGTGCGGACGCGGATCTTGTTATCTGG GATCCGGCTGCGACGAAGACCATTTCTGTGAAGACGCATCATCAGAAGGTCGACTTCAATGTGTTCGAAGGGATGACGGT GCAAGGCGCGGCCATGCATACCTTTGCGCGTGGGGCGCACGTGTGGGCCGATGGCGATCTTCGCGCACAGCGCGGCGCTG GGCAGTATTTGAGGCGTCCGCCCAATGCAGCTTATTACGACGCCGTGCGTGTCGTTAATCGGCTTAGGGAGCCGCATCCC GTAGAGCGGTAA
Upstream 100 bases:
>100_bases CATCCATTGTGTATGGCACGTGGATGAAGCTGCGCCGCAATCCCGGCGCGAGCATGGCGAGTGCGTGATGTGATTCGATG TTTGACCGAGGAGGCAAGCG
Downstream 100 bases:
>100_bases CGTTTGTGCTTGACGGCGGCTGCTTGATGCTTTTTTGTCTGCGACGTAGTGGCCGCGCCTGGTTTTTTGTTGGCATCCGC GATTTGCCTTCGTTGTTCAG
Product: phenylhydantoinase
Products: NA
Alternate protein names: DHPase [H]
Number of amino acids: Translated: 483; Mature: 482
Protein sequence:
>483_residues MTTLIRGGTVIDADRTHRADVLIADPQDGGTILQVDRTIEPPAGARIVDAHDQYVMPGGIDPHTHMELPFMGTTASDDFY TGTAAGLSGGTTSIIDFVIPSPKQPLMDAFNEWRGWAEKASADYGFHVAVTWWDDSVYRDMGTLVNEHGVSSFKHFMAYK NAIMADDEVLVNSFSRSLELGALPTVHAENGELVFQLQKQLLAKGFRGPEAHPLSRPPEVEGEAANRAIRIAQVLGVPVY IVHVSSREAVEAISRARNEGQRVFGEVLPGHLVIDESVYRDPDWTRAAAHVMSPPFRTREHREALWRGLQAGQLHTTATD HCVFCASQKAMGREDFTKIPNGCGGIEDRMSVLWHEGVNQGRVTPNEFVRITSANAAQIFNLYPRKGAVQAGADADLVIW DPAATKTISVKTHHQKVDFNVFEGMTVQGAAMHTFARGAHVWADGDLRAQRGAGQYLRRPPNAAYYDAVRVVNRLREPHP VER
Sequences:
>Translated_483_residues MTTLIRGGTVIDADRTHRADVLIADPQDGGTILQVDRTIEPPAGARIVDAHDQYVMPGGIDPHTHMELPFMGTTASDDFY TGTAAGLSGGTTSIIDFVIPSPKQPLMDAFNEWRGWAEKASADYGFHVAVTWWDDSVYRDMGTLVNEHGVSSFKHFMAYK NAIMADDEVLVNSFSRSLELGALPTVHAENGELVFQLQKQLLAKGFRGPEAHPLSRPPEVEGEAANRAIRIAQVLGVPVY IVHVSSREAVEAISRARNEGQRVFGEVLPGHLVIDESVYRDPDWTRAAAHVMSPPFRTREHREALWRGLQAGQLHTTATD HCVFCASQKAMGREDFTKIPNGCGGIEDRMSVLWHEGVNQGRVTPNEFVRITSANAAQIFNLYPRKGAVQAGADADLVIW DPAATKTISVKTHHQKVDFNVFEGMTVQGAAMHTFARGAHVWADGDLRAQRGAGQYLRRPPNAAYYDAVRVVNRLREPHP VER >Mature_482_residues TTLIRGGTVIDADRTHRADVLIADPQDGGTILQVDRTIEPPAGARIVDAHDQYVMPGGIDPHTHMELPFMGTTASDDFYT GTAAGLSGGTTSIIDFVIPSPKQPLMDAFNEWRGWAEKASADYGFHVAVTWWDDSVYRDMGTLVNEHGVSSFKHFMAYKN AIMADDEVLVNSFSRSLELGALPTVHAENGELVFQLQKQLLAKGFRGPEAHPLSRPPEVEGEAANRAIRIAQVLGVPVYI VHVSSREAVEAISRARNEGQRVFGEVLPGHLVIDESVYRDPDWTRAAAHVMSPPFRTREHREALWRGLQAGQLHTTATDH CVFCASQKAMGREDFTKIPNGCGGIEDRMSVLWHEGVNQGRVTPNEFVRITSANAAQIFNLYPRKGAVQAGADADLVIWD PAATKTISVKTHHQKVDFNVFEGMTVQGAAMHTFARGAHVWADGDLRAQRGAGQYLRRPPNAAYYDAVRVVNRLREPHPV ER
Specific function: Catalyzes the hydrolysis of dihydropyrimidines and of the structurally related DL-5-mono-substituted hydantoins, to produce N-carbamoyl-D-amino acids [H]
COG id: COG0044
COG function: function code F; Dihydroorotase and related cyclic amidohydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DHOase family. Hydantoinase/dihydropyrimidinase subfamily [H]
Homologues:
Organism=Homo sapiens, GI4503375, Length=487, Percent_Identity=49.2813141683778, Blast_Score=472, Evalue=1e-133, Organism=Homo sapiens, GI4503379, Length=486, Percent_Identity=41.9753086419753, Blast_Score=417, Evalue=1e-116, Organism=Homo sapiens, GI4503377, Length=486, Percent_Identity=42.3868312757202, Blast_Score=412, Evalue=1e-115, Organism=Homo sapiens, GI190194363, Length=486, Percent_Identity=43.6213991769547, Blast_Score=401, Evalue=1e-112, Organism=Homo sapiens, GI19923821, Length=477, Percent_Identity=44.4444444444444, Blast_Score=397, Evalue=1e-110, Organism=Homo sapiens, GI4503051, Length=478, Percent_Identity=42.2594142259414, Blast_Score=395, Evalue=1e-110, Organism=Homo sapiens, GI62422571, Length=481, Percent_Identity=42.2037422037422, Blast_Score=394, Evalue=1e-109, Organism=Homo sapiens, GI18105007, Length=409, Percent_Identity=25.6723716381418, Blast_Score=84, Evalue=2e-16, Organism=Escherichia coli, GI87082175, Length=465, Percent_Identity=38.0645161290323, Blast_Score=315, Evalue=6e-87, Organism=Escherichia coli, GI1786722, Length=460, Percent_Identity=26.7391304347826, Blast_Score=137, Evalue=1e-33, Organism=Caenorhabditis elegans, GI17539558, Length=487, Percent_Identity=45.9958932238193, Blast_Score=447, Evalue=1e-126, Organism=Caenorhabditis elegans, GI71989490, Length=467, Percent_Identity=45.610278372591, Blast_Score=422, Evalue=1e-118, Organism=Caenorhabditis elegans, GI86575075, Length=472, Percent_Identity=30.2966101694915, Blast_Score=227, Evalue=9e-60, Organism=Caenorhabditis elegans, GI193204318, Length=448, Percent_Identity=25.4464285714286, Blast_Score=88, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6322218, Length=422, Percent_Identity=26.0663507109005, Blast_Score=117, Evalue=4e-27, Organism=Drosophila melanogaster, GI221377917, Length=484, Percent_Identity=44.4214876033058, Blast_Score=420, Evalue=1e-117, Organism=Drosophila melanogaster, GI17137462, Length=482, Percent_Identity=43.9834024896266, Blast_Score=413, Evalue=1e-115, Organism=Drosophila melanogaster, GI24644287, Length=298, Percent_Identity=44.6308724832215, Blast_Score=261, Evalue=1e-69, Organism=Drosophila melanogaster, GI24644289, Length=239, Percent_Identity=46.8619246861925, Blast_Score=223, Evalue=3e-58, Organism=Drosophila melanogaster, GI24642586, Length=404, Percent_Identity=26.980198019802, Blast_Score=95, Evalue=1e-19, Organism=Drosophila melanogaster, GI18859883, Length=475, Percent_Identity=24.8421052631579, Blast_Score=94, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR011778 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.2.2 [H]
Molecular weight: Translated: 53208; Mature: 53077
Theoretical pI: Translated: 6.47; Mature: 6.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLIRGGTVIDADRTHRADVLIADPQDGGTILQVDRTIEPPAGARIVDAHDQYVMPGGI CCEEEECCEEEECCCCCCCCEEEECCCCCCEEEEECCCCCCCCCCEEEECCCCEECCCCC DPHTHMELPFMGTTASDDFYTGTAAGLSGGTTSIIDFVIPSPKQPLMDAFNEWRGWAEKA CCCCEEECCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHC SADYGFHVAVTWWDDSVYRDMGTLVNEHGVSSFKHFMAYKNAIMADDEVLVNSFSRSLEL CCCCCEEEEEEEECCHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHCEEC GALPTVHAENGELVFQLQKQLLAKGFRGPEAHPLSRPPEVEGEAANRAIRIAQVLGVPVY CCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEE IVHVSSREAVEAISRARNEGQRVFGEVLPGHLVIDESVYRDPDWTRAAAHVMSPPFRTRE EEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHCCCCCHHHHHHHHCCCCCCCHH HREALWRGLQAGQLHTTATDHCVFCASQKAMGREDFTKIPNGCGGIEDRMSVLWHEGVNQ HHHHHHCCCCCCEEECCCCCCEEEECCCHHCCCHHHHHCCCCCCCHHHHHHHHHHCCCCC GRVTPNEFVRITSANAAQIFNLYPRKGAVQAGADADLVIWDPAATKTISVKTHHQKVDFN CCCCHHHEEEEECCCHHHHEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCEECEE VFEGMTVQGAAMHTFARGAHVWADGDLRAQRGAGQYLRRPPNAAYYDAVRVVNRLREPHP HHCCCEECCHHHHHHHCCCEEEECCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCC VER CCC >Mature Secondary Structure TTLIRGGTVIDADRTHRADVLIADPQDGGTILQVDRTIEPPAGARIVDAHDQYVMPGGI CEEEECCEEEECCCCCCCCEEEECCCCCCEEEEECCCCCCCCCCEEEECCCCEECCCCC DPHTHMELPFMGTTASDDFYTGTAAGLSGGTTSIIDFVIPSPKQPLMDAFNEWRGWAEKA CCCCEEECCEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHC SADYGFHVAVTWWDDSVYRDMGTLVNEHGVSSFKHFMAYKNAIMADDEVLVNSFSRSLEL CCCCCEEEEEEEECCHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHCEEC GALPTVHAENGELVFQLQKQLLAKGFRGPEAHPLSRPPEVEGEAANRAIRIAQVLGVPVY CCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEE IVHVSSREAVEAISRARNEGQRVFGEVLPGHLVIDESVYRDPDWTRAAAHVMSPPFRTRE EEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHCCCCCHHHHHHHHCCCCCCCHH HREALWRGLQAGQLHTTATDHCVFCASQKAMGREDFTKIPNGCGGIEDRMSVLWHEGVNQ HHHHHHCCCCCCEEECCCCCCEEEECCCHHCCCHHHHHCCCCCCCHHHHHHHHHHCCCCC GRVTPNEFVRITSANAAQIFNLYPRKGAVQAGADADLVIWDPAATKTISVKTHHQKVDFN CCCCHHHEEEEECCCHHHHEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCEECEE VFEGMTVQGAAMHTFARGAHVWADGDLRAQRGAGQYLRRPPNAAYYDAVRVVNRLREPHP HHCCCEECCHHHHHHHCCCEEEECCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCC VER CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]