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The map label for this gene is yecS [H]

Identifier: 186476288

GI number: 186476288

Start: 1727242

End: 1727919

Strand: Reverse

Name: yecS [H]

Synonym: Bphy_1530

Alternate gene names: 186476288

Gene position: 1727919-1727242 (Counterclockwise)

Preceding gene: 186476289

Following gene: 186476287

Centisome position: 49.66

GC content: 62.24

Gene sequence:

>678_bases
ATGCCTGCCTGGTTGCATCTGATGGGTGAATCGCTGTGGCCGCTGCTTTATGCGGGCCTGGTGTTCACCGTGCCGTTGAC
GCTCGTGTCGTTTGGAATCGGGATCGCGCTCGCGTTCATCGTCGCCCTGATCCGGCTGTTCGGACCAAACTGGTCCGTGG
CGATCGTGCGCTTCTACGTGTGGCTGTTTCGCGGCTCGCCGCTGCTGGTCCAGCTGTTCGTCATCTTCTATGGGTTGCCG
AATGTCGGGATCGTGCTCGACCCGCTGACGGCCGCGATCATCGGCTTTTCGTTGAATGTCGGTGCGTACAATTCCGAAGT
GATTCGCGGGGTGATCGAATCGATTCCGAAGGGACAGTGGGAAGCCGCGTATTCGATGGGCATGACGCGCGCGCAGGCGC
TACGCCGCGCGATCCTGCCGCAGGCGGCGCGCGTCGCATTGCCGCCGCTGTCGAACTCGTTCATCGCGCTCGTGAAAGAT
ACGTCGCTTGCCGCTGTGCTGACGGTGCCGGAGATTTTTCAGGCCGCGCAGCGCATTGCATCGGTGACGTACGAGCCGCT
CATTCTCTACACGGAAGCCGCGCTGATCTATCTGGTGTTCAGCTCGGTGCTGTCGTCCGCGCAGGTGCGCCTGGAGCGCC
GCTTCGGCCGTCACGCGCTTTTCACGTCGGGTAACTGA

Upstream 100 bases:

>100_bases
GGCGCTGGCAGAAATCAAGGCCGACGGTACGTACGCGAAGATCTCCGAGAAGTACTTCGGCAAAGACGTTTCCAAGTAAG
CACGAAGGCGAGCCTGAATC

Downstream 100 bases:

>100_bases
ACGATGATCCGCCTCGAAAAAATCGAAAAGTATTTCGGCGATCATCGCGTGCTGAACAGCGTCGATCTCAGGCTCGAACA
GGGCAACGTGACCGCGCTGA

Product: polar amino acid ABC transporter inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MPAWLHLMGESLWPLLYAGLVFTVPLTLVSFGIGIALAFIVALIRLFGPNWSVAIVRFYVWLFRGSPLLVQLFVIFYGLP
NVGIVLDPLTAAIIGFSLNVGAYNSEVIRGVIESIPKGQWEAAYSMGMTRAQALRRAILPQAARVALPPLSNSFIALVKD
TSLAAVLTVPEIFQAAQRIASVTYEPLILYTEAALIYLVFSSVLSSAQVRLERRFGRHALFTSGN

Sequences:

>Translated_225_residues
MPAWLHLMGESLWPLLYAGLVFTVPLTLVSFGIGIALAFIVALIRLFGPNWSVAIVRFYVWLFRGSPLLVQLFVIFYGLP
NVGIVLDPLTAAIIGFSLNVGAYNSEVIRGVIESIPKGQWEAAYSMGMTRAQALRRAILPQAARVALPPLSNSFIALVKD
TSLAAVLTVPEIFQAAQRIASVTYEPLILYTEAALIYLVFSSVLSSAQVRLERRFGRHALFTSGN
>Mature_224_residues
PAWLHLMGESLWPLLYAGLVFTVPLTLVSFGIGIALAFIVALIRLFGPNWSVAIVRFYVWLFRGSPLLVQLFVIFYGLPN
VGIVLDPLTAAIIGFSLNVGAYNSEVIRGVIESIPKGQWEAAYSMGMTRAQALRRAILPQAARVALPPLSNSFIALVKDT
SLAAVLTVPEIFQAAQRIASVTYEPLILYTEAALIYLVFSSVLSSAQVRLERRFGRHALFTSGN

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=219, Percent_Identity=53.4246575342466, Blast_Score=213, Evalue=6e-57,
Organism=Escherichia coli, GI1787030, Length=203, Percent_Identity=34.9753694581281, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1788645, Length=212, Percent_Identity=33.9622641509434, Blast_Score=117, Evalue=4e-28,
Organism=Escherichia coli, GI1788646, Length=196, Percent_Identity=36.2244897959184, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1787086, Length=211, Percent_Identity=33.175355450237, Blast_Score=107, Evalue=5e-25,
Organism=Escherichia coli, GI87082239, Length=202, Percent_Identity=36.1386138613861, Blast_Score=97, Evalue=7e-22,
Organism=Escherichia coli, GI1787087, Length=226, Percent_Identity=28.7610619469027, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1786873, Length=212, Percent_Identity=35.377358490566, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1786874, Length=212, Percent_Identity=25.4716981132075, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI48994930, Length=91, Percent_Identity=41.7582417582418, Blast_Score=74, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 24625; Mature: 24494

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAWLHLMGESLWPLLYAGLVFTVPLTLVSFGIGIALAFIVALIRLFGPNWSVAIVRFYV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
WLFRGSPLLVQLFVIFYGLPNVGIVLDPLTAAIIGFSLNVGAYNSEVIRGVIESIPKGQW
HHHCCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCH
EAAYSMGMTRAQALRRAILPQAARVALPPLSNSFIALVKDTSLAAVLTVPEIFQAAQRIA
HHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHH
SVTYEPLILYTEAALIYLVFSSVLSSAQVRLERRFGRHALFTSGN
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PAWLHLMGESLWPLLYAGLVFTVPLTLVSFGIGIALAFIVALIRLFGPNWSVAIVRFYV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
WLFRGSPLLVQLFVIFYGLPNVGIVLDPLTAAIIGFSLNVGAYNSEVIRGVIESIPKGQW
HHHCCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCH
EAAYSMGMTRAQALRRAILPQAARVALPPLSNSFIALVKDTSLAAVLTVPEIFQAAQRIA
HHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHH
SVTYEPLILYTEAALIYLVFSSVLSSAQVRLERRFGRHALFTSGN
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]