Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is yacH [H]

Identifier: 186476231

GI number: 186476231

Start: 1660202

End: 1661512

Strand: Direct

Name: yacH [H]

Synonym: Bphy_1473

Alternate gene names: 186476231

Gene position: 1660202-1661512 (Clockwise)

Preceding gene: 186476230

Following gene: 186476232

Centisome position: 47.72

GC content: 65.75

Gene sequence:

>1311_bases
GTGAAACGTTACGGACCCTACCGACCGCGCACCTGGCTCGTCTGCGCGGCGCTTGCAGGCTTTCCGCTCGCCGCGGAATT
CGTCGCGCCGGCTGACGTCGTCGCGCAAACGCCCACGAAAGTATCGAATGAACAGCTCGATGCGCTGACGGCCCCGATTG
CGCTCTATCCCGACGCGCTGCTCGCTCAGGTGTTGATGGCGTCGACGTTCCCGCAGGATGTCGAAGCGGCCGCCGCATGG
TCGAAAGCGAATTCGCAATACAAGGGCGACGACGCGGTCAAGGCCGTCGCCTCGGAACCGTGGGACCCGAGCGTTCAGTC
GCTCGTTGCCTTCCCGCAAGCGCTCGCAACGATGGCTTCGAAACCCGATTGGGTCGCGCAACTCGGCAACGCGTTTCTCG
CCCAACCCAACGACGTAATGGACTCGGTGCAGCGGCTGCGCAAGCAGGCGCAATCCGCGGGCAATCTGAAGTCGAGCGAG
CAGCAGAAGGTGATCGTCGAGCAGAACACGATCCAGATCCAGCCCGCCAATCCGCAGGTGGTCTACGTACCGACCTACAA
CCCGACTGTCGTCTACGGCACCTGGCCCTATCCCGCCTATCCGCCCGTCTATGTGCCGCCGCCGCCAGGCTACGCCATCG
CGACAGGCTTCATGACGGGCCTTGCGTTCGGCGCGGGCGTGGCTGTCGCCAATTCGCTGTGGGGCGGCTTCAACTGGAAC
ACGCACGACGTCAACATCAACGTCAATCGCTACAACAACGTCAACGTCAACAACCGGATCAGCTCGAACACGGCTACGAC
GAACTGGAACCGGAACGCAAACGTCAACCGCAACAATGCGAACATCAACCGTAGCAACGCGAACCTGACCAACAGCAATC
TCGCTCCGCAACGCGACCAGTACCGCGGGCGCGACGCGTCGCGGGCGCAGGCGCAGCAGACGCTTCAGAACCGCACTGGT
CAGAACCTGAGCGGCAATGCGAGCCAGCGCGTGCAGACCATCCATCAGGGCGGCGCGAACGCCGGCGACGTCCGCAACAG
CGCGCAAAACCTGAACCGCGACAACGCGTTACGAGGTTCCGGCGACCCCGCAGGATCACGTCAGGAACTGCAGCGCGGCC
AATCGAGCCGGCAGTCGCTCGCGCAGAGCGGCGGCGCGAACAACCGGCTCGGCGCGGGCGGCGGCGGGCAGCAGTTCGAA
GGCCGGCAGGCCGGGGGCTTCCAGGGCGGCGGCGGTGGCAACTTCGGCGGCGGGCGCGCCGGTGGTGGCGGATTCCACGG
CGGCGGAGGCGGCGGATTCCATCGCCGCTAG

Upstream 100 bases:

>100_bases
GTTCCATTATCAGTCGCGATACACGGGCGCCGGACCGGCGCGCGATCGCACAACACAGCGCCGCAGCCGCTGCGCGCAAC
GCAGCACGGAGGTTTTCATT

Downstream 100 bases:

>100_bases
ACGACTGTTCGACACTCTCATCATGCATGTGGCTGGTGTAACCCGGGAAAGCCTCGACGCACCCCGATACCAGCCGACAG
GAGATTCACATGAACCGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MKRYGPYRPRTWLVCAALAGFPLAAEFVAPADVVAQTPTKVSNEQLDALTAPIALYPDALLAQVLMASTFPQDVEAAAAW
SKANSQYKGDDAVKAVASEPWDPSVQSLVAFPQALATMASKPDWVAQLGNAFLAQPNDVMDSVQRLRKQAQSAGNLKSSE
QQKVIVEQNTIQIQPANPQVVYVPTYNPTVVYGTWPYPAYPPVYVPPPPGYAIATGFMTGLAFGAGVAVANSLWGGFNWN
THDVNINVNRYNNVNVNNRISSNTATTNWNRNANVNRNNANINRSNANLTNSNLAPQRDQYRGRDASRAQAQQTLQNRTG
QNLSGNASQRVQTIHQGGANAGDVRNSAQNLNRDNALRGSGDPAGSRQELQRGQSSRQSLAQSGGANNRLGAGGGGQQFE
GRQAGGFQGGGGGNFGGGRAGGGGFHGGGGGGFHRR

Sequences:

>Translated_436_residues
MKRYGPYRPRTWLVCAALAGFPLAAEFVAPADVVAQTPTKVSNEQLDALTAPIALYPDALLAQVLMASTFPQDVEAAAAW
SKANSQYKGDDAVKAVASEPWDPSVQSLVAFPQALATMASKPDWVAQLGNAFLAQPNDVMDSVQRLRKQAQSAGNLKSSE
QQKVIVEQNTIQIQPANPQVVYVPTYNPTVVYGTWPYPAYPPVYVPPPPGYAIATGFMTGLAFGAGVAVANSLWGGFNWN
THDVNINVNRYNNVNVNNRISSNTATTNWNRNANVNRNNANINRSNANLTNSNLAPQRDQYRGRDASRAQAQQTLQNRTG
QNLSGNASQRVQTIHQGGANAGDVRNSAQNLNRDNALRGSGDPAGSRQELQRGQSSRQSLAQSGGANNRLGAGGGGQQFE
GRQAGGFQGGGGGNFGGGRAGGGGFHGGGGGGFHRR
>Mature_436_residues
MKRYGPYRPRTWLVCAALAGFPLAAEFVAPADVVAQTPTKVSNEQLDALTAPIALYPDALLAQVLMASTFPQDVEAAAAW
SKANSQYKGDDAVKAVASEPWDPSVQSLVAFPQALATMASKPDWVAQLGNAFLAQPNDVMDSVQRLRKQAQSAGNLKSSE
QQKVIVEQNTIQIQPANPQVVYVPTYNPTVVYGTWPYPAYPPVYVPPPPGYAIATGFMTGLAFGAGVAVANSLWGGFNWN
THDVNINVNRYNNVNVNNRISSNTATTNWNRNANVNRNNANINRSNANLTNSNLAPQRDQYRGRDASRAQAQQTLQNRTG
QNLSGNASQRVQTIHQGGANAGDVRNSAQNLNRDNALRGSGDPAGSRQELQRGQSSRQSLAQSGGANNRLGAGGGGQQFE
GRQAGGFQGGGGGNFGGGRAGGGGFHGGGGGGFHRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786308, Length=333, Percent_Identity=40.5405405405405, Blast_Score=226, Evalue=3e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021728 [H]

Pfam domain/function: PF11737 DUF3300 [H]

EC number: NA

Molecular weight: Translated: 46145; Mature: 46145

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRYGPYRPRTWLVCAALAGFPLAAEFVAPADVVAQTPTKVSNEQLDALTAPIALYPDAL
CCCCCCCCCHHHHHHHHHHCCCHHHHHHCCHHHHHCCCCCCCHHHHHHHHCCHHHCHHHH
LAQVLMASTFPQDVEAAAAWSKANSQYKGDDAVKAVASEPWDPSVQSLVAFPQALATMAS
HHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC
KPDWVAQLGNAFLAQPNDVMDSVQRLRKQAQSAGNLKSSEQQKVIVEQNTIQIQPANPQV
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEEECCCCEE
VYVPTYNPTVVYGTWPYPAYPPVYVPPPPGYAIATGFMTGLAFGAGVAVANSLWGGFNWN
EEEECCCCEEEEECCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
THDVNINVNRYNNVNVNNRISSNTATTNWNRNANVNRNNANINRSNANLTNSNLAPQRDQ
EEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
YRGRDASRAQAQQTLQNRTGQNLSGNASQRVQTIHQGGANAGDVRNSAQNLNRDNALRGS
HCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCC
GDPAGSRQELQRGQSSRQSLAQSGGANNRLGAGGGGQQFEGRQAGGFQGGGGGNFGGGRA
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GGGGFHGGGGGGFHRR
CCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKRYGPYRPRTWLVCAALAGFPLAAEFVAPADVVAQTPTKVSNEQLDALTAPIALYPDAL
CCCCCCCCCHHHHHHHHHHCCCHHHHHHCCHHHHHCCCCCCCHHHHHHHHCCHHHCHHHH
LAQVLMASTFPQDVEAAAAWSKANSQYKGDDAVKAVASEPWDPSVQSLVAFPQALATMAS
HHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC
KPDWVAQLGNAFLAQPNDVMDSVQRLRKQAQSAGNLKSSEQQKVIVEQNTIQIQPANPQV
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEEECCCCEE
VYVPTYNPTVVYGTWPYPAYPPVYVPPPPGYAIATGFMTGLAFGAGVAVANSLWGGFNWN
EEEECCCCEEEEECCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
THDVNINVNRYNNVNVNNRISSNTATTNWNRNANVNRNNANINRSNANLTNSNLAPQRDQ
EEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
YRGRDASRAQAQQTLQNRTGQNLSGNASQRVQTIHQGGANAGDVRNSAQNLNRDNALRGS
HCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCC
GDPAGSRQELQRGQSSRQSLAQSGGANNRLGAGGGGQQFEGRQAGGFQGGGGGNFGGGRA
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GGGGFHGGGGGGFHRR
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503 [H]