| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is yacH [H]
Identifier: 186476231
GI number: 186476231
Start: 1660202
End: 1661512
Strand: Direct
Name: yacH [H]
Synonym: Bphy_1473
Alternate gene names: 186476231
Gene position: 1660202-1661512 (Clockwise)
Preceding gene: 186476230
Following gene: 186476232
Centisome position: 47.72
GC content: 65.75
Gene sequence:
>1311_bases GTGAAACGTTACGGACCCTACCGACCGCGCACCTGGCTCGTCTGCGCGGCGCTTGCAGGCTTTCCGCTCGCCGCGGAATT CGTCGCGCCGGCTGACGTCGTCGCGCAAACGCCCACGAAAGTATCGAATGAACAGCTCGATGCGCTGACGGCCCCGATTG CGCTCTATCCCGACGCGCTGCTCGCTCAGGTGTTGATGGCGTCGACGTTCCCGCAGGATGTCGAAGCGGCCGCCGCATGG TCGAAAGCGAATTCGCAATACAAGGGCGACGACGCGGTCAAGGCCGTCGCCTCGGAACCGTGGGACCCGAGCGTTCAGTC GCTCGTTGCCTTCCCGCAAGCGCTCGCAACGATGGCTTCGAAACCCGATTGGGTCGCGCAACTCGGCAACGCGTTTCTCG CCCAACCCAACGACGTAATGGACTCGGTGCAGCGGCTGCGCAAGCAGGCGCAATCCGCGGGCAATCTGAAGTCGAGCGAG CAGCAGAAGGTGATCGTCGAGCAGAACACGATCCAGATCCAGCCCGCCAATCCGCAGGTGGTCTACGTACCGACCTACAA CCCGACTGTCGTCTACGGCACCTGGCCCTATCCCGCCTATCCGCCCGTCTATGTGCCGCCGCCGCCAGGCTACGCCATCG CGACAGGCTTCATGACGGGCCTTGCGTTCGGCGCGGGCGTGGCTGTCGCCAATTCGCTGTGGGGCGGCTTCAACTGGAAC ACGCACGACGTCAACATCAACGTCAATCGCTACAACAACGTCAACGTCAACAACCGGATCAGCTCGAACACGGCTACGAC GAACTGGAACCGGAACGCAAACGTCAACCGCAACAATGCGAACATCAACCGTAGCAACGCGAACCTGACCAACAGCAATC TCGCTCCGCAACGCGACCAGTACCGCGGGCGCGACGCGTCGCGGGCGCAGGCGCAGCAGACGCTTCAGAACCGCACTGGT CAGAACCTGAGCGGCAATGCGAGCCAGCGCGTGCAGACCATCCATCAGGGCGGCGCGAACGCCGGCGACGTCCGCAACAG CGCGCAAAACCTGAACCGCGACAACGCGTTACGAGGTTCCGGCGACCCCGCAGGATCACGTCAGGAACTGCAGCGCGGCC AATCGAGCCGGCAGTCGCTCGCGCAGAGCGGCGGCGCGAACAACCGGCTCGGCGCGGGCGGCGGCGGGCAGCAGTTCGAA GGCCGGCAGGCCGGGGGCTTCCAGGGCGGCGGCGGTGGCAACTTCGGCGGCGGGCGCGCCGGTGGTGGCGGATTCCACGG CGGCGGAGGCGGCGGATTCCATCGCCGCTAG
Upstream 100 bases:
>100_bases GTTCCATTATCAGTCGCGATACACGGGCGCCGGACCGGCGCGCGATCGCACAACACAGCGCCGCAGCCGCTGCGCGCAAC GCAGCACGGAGGTTTTCATT
Downstream 100 bases:
>100_bases ACGACTGTTCGACACTCTCATCATGCATGTGGCTGGTGTAACCCGGGAAAGCCTCGACGCACCCCGATACCAGCCGACAG GAGATTCACATGAACCGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 436; Mature: 436
Protein sequence:
>436_residues MKRYGPYRPRTWLVCAALAGFPLAAEFVAPADVVAQTPTKVSNEQLDALTAPIALYPDALLAQVLMASTFPQDVEAAAAW SKANSQYKGDDAVKAVASEPWDPSVQSLVAFPQALATMASKPDWVAQLGNAFLAQPNDVMDSVQRLRKQAQSAGNLKSSE QQKVIVEQNTIQIQPANPQVVYVPTYNPTVVYGTWPYPAYPPVYVPPPPGYAIATGFMTGLAFGAGVAVANSLWGGFNWN THDVNINVNRYNNVNVNNRISSNTATTNWNRNANVNRNNANINRSNANLTNSNLAPQRDQYRGRDASRAQAQQTLQNRTG QNLSGNASQRVQTIHQGGANAGDVRNSAQNLNRDNALRGSGDPAGSRQELQRGQSSRQSLAQSGGANNRLGAGGGGQQFE GRQAGGFQGGGGGNFGGGRAGGGGFHGGGGGGFHRR
Sequences:
>Translated_436_residues MKRYGPYRPRTWLVCAALAGFPLAAEFVAPADVVAQTPTKVSNEQLDALTAPIALYPDALLAQVLMASTFPQDVEAAAAW SKANSQYKGDDAVKAVASEPWDPSVQSLVAFPQALATMASKPDWVAQLGNAFLAQPNDVMDSVQRLRKQAQSAGNLKSSE QQKVIVEQNTIQIQPANPQVVYVPTYNPTVVYGTWPYPAYPPVYVPPPPGYAIATGFMTGLAFGAGVAVANSLWGGFNWN THDVNINVNRYNNVNVNNRISSNTATTNWNRNANVNRNNANINRSNANLTNSNLAPQRDQYRGRDASRAQAQQTLQNRTG QNLSGNASQRVQTIHQGGANAGDVRNSAQNLNRDNALRGSGDPAGSRQELQRGQSSRQSLAQSGGANNRLGAGGGGQQFE GRQAGGFQGGGGGNFGGGRAGGGGFHGGGGGGFHRR >Mature_436_residues MKRYGPYRPRTWLVCAALAGFPLAAEFVAPADVVAQTPTKVSNEQLDALTAPIALYPDALLAQVLMASTFPQDVEAAAAW SKANSQYKGDDAVKAVASEPWDPSVQSLVAFPQALATMASKPDWVAQLGNAFLAQPNDVMDSVQRLRKQAQSAGNLKSSE QQKVIVEQNTIQIQPANPQVVYVPTYNPTVVYGTWPYPAYPPVYVPPPPGYAIATGFMTGLAFGAGVAVANSLWGGFNWN THDVNINVNRYNNVNVNNRISSNTATTNWNRNANVNRNNANINRSNANLTNSNLAPQRDQYRGRDASRAQAQQTLQNRTG QNLSGNASQRVQTIHQGGANAGDVRNSAQNLNRDNALRGSGDPAGSRQELQRGQSSRQSLAQSGGANNRLGAGGGGQQFE GRQAGGFQGGGGGNFGGGRAGGGGFHGGGGGGFHRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786308, Length=333, Percent_Identity=40.5405405405405, Blast_Score=226, Evalue=3e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021728 [H]
Pfam domain/function: PF11737 DUF3300 [H]
EC number: NA
Molecular weight: Translated: 46145; Mature: 46145
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRYGPYRPRTWLVCAALAGFPLAAEFVAPADVVAQTPTKVSNEQLDALTAPIALYPDAL CCCCCCCCCHHHHHHHHHHCCCHHHHHHCCHHHHHCCCCCCCHHHHHHHHCCHHHCHHHH LAQVLMASTFPQDVEAAAAWSKANSQYKGDDAVKAVASEPWDPSVQSLVAFPQALATMAS HHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC KPDWVAQLGNAFLAQPNDVMDSVQRLRKQAQSAGNLKSSEQQKVIVEQNTIQIQPANPQV CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEEECCCCEE VYVPTYNPTVVYGTWPYPAYPPVYVPPPPGYAIATGFMTGLAFGAGVAVANSLWGGFNWN EEEECCCCEEEEECCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC THDVNINVNRYNNVNVNNRISSNTATTNWNRNANVNRNNANINRSNANLTNSNLAPQRDQ EEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH YRGRDASRAQAQQTLQNRTGQNLSGNASQRVQTIHQGGANAGDVRNSAQNLNRDNALRGS HCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCC GDPAGSRQELQRGQSSRQSLAQSGGANNRLGAGGGGQQFEGRQAGGFQGGGGGNFGGGRA CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGGGFHGGGGGGFHRR CCCCCCCCCCCCCCCC >Mature Secondary Structure MKRYGPYRPRTWLVCAALAGFPLAAEFVAPADVVAQTPTKVSNEQLDALTAPIALYPDAL CCCCCCCCCHHHHHHHHHHCCCHHHHHHCCHHHHHCCCCCCCHHHHHHHHCCHHHCHHHH LAQVLMASTFPQDVEAAAAWSKANSQYKGDDAVKAVASEPWDPSVQSLVAFPQALATMAS HHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC KPDWVAQLGNAFLAQPNDVMDSVQRLRKQAQSAGNLKSSEQQKVIVEQNTIQIQPANPQV CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEEECCCCEE VYVPTYNPTVVYGTWPYPAYPPVYVPPPPGYAIATGFMTGLAFGAGVAVANSLWGGFNWN EEEECCCCEEEEECCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC THDVNINVNRYNNVNVNNRISSNTATTNWNRNANVNRNNANINRSNANLTNSNLAPQRDQ EEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH YRGRDASRAQAQQTLQNRTGQNLSGNASQRVQTIHQGGANAGDVRNSAQNLNRDNALRGS HCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCC GDPAGSRQELQRGQSSRQSLAQSGGANNRLGAGGGGQQFEGRQAGGFQGGGGGNFGGGRA CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGGGFHGGGGGGFHRR CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8202364; 9278503 [H]