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The map label for this gene is recJ [H]

Identifier: 186476206

GI number: 186476206

Start: 1629302

End: 1631035

Strand: Direct

Name: recJ [H]

Synonym: Bphy_1448

Alternate gene names: 186476206

Gene position: 1629302-1631035 (Clockwise)

Preceding gene: 186476205

Following gene: 186476207

Centisome position: 46.83

GC content: 67.01

Gene sequence:

>1734_bases
ATGAACCGTTTTCCGCCCGATCCGCGCATGACCCGAATCGTTACCCGCCCCTGCTCTCCCGCCGACGCCGAAGCGTTGAT
CCGCCACGGCCTGCATCCCGTGCTCGCGCGTCTGTACGCGTCGCGCGGCGTCTGCCTGCCCGATGAGGTCGAAACCGGCC
TCGCGCGCCTCACGCCGCCCGCGTCGCTCAAAGGCTGCGACACGGCCGCCGCGCTGCTCGCCGATGCGATCGAAGGCAAA
CGCCGCATGCTGGTCGTCGCCGACTACGACTGCGACGGCGCGACCGCCTGCGCCGTCGCCGTACGCGGACTGCGGATGTT
CGGCGCGCAGATCGACTACCTCGTGCCGAATCGCTTCGAGTACGGCTACGGTCTGACGCCTGAAATCGTCGGGCTTGCCG
CGCAGCGTCCCGGCGGCAAGCCCGACTTGCTGATCACCGTCGACAACGGCATTGCAAGCGTCGACGGAGTCGAGGCGGCG
AACGCGCTCGGCATCGATGTGCTCGTCACCGACCATCACCTGCCCGGCGACGAACTACCCGCCGCGCGCGCGATCGTCAA
TCCGAACCAGCCGGGATGCTCGTTTCCGAGCAAATGCATGGCGGGCGTCGGCGTGATGTTCTACGTGCTGCTCGCGTTGC
GCGCCGAACTGCGCACGCGCGGCGCGTTCGGCGAAACGCGTCCGGAGCCGCGCCTCGACGGCCTGCTCGACCTCGTCGCG
CTTGGCACGGTGGCCGACGTCGTCAAGCTCGACGGCAACAACCGGGTGCTGGTTGCGCAGGGTTTGCAGCGCATCCGCAA
TGGGCGCATGCAACCGGGCATCGCCGCTCTTTTTCGCGCAGCGGGGCGCGATGCGCGCAGCGCGTCGGGCTTCGATCTGG
GCTTCGCGCTCGGGCCGCGGTTGAACGCGGCGGGACGTTTGTCGGACATGTCGCTGGGCATCGACTGCCTGACGACGGAC
GACGTCGGACGCGCGTGGGAGCTCGCGCAACAGCTCGACGCGATGAACCGCGAGCGGCGCGAAATCGAAGCGGGCATGCA
GCAGCAGGCGCTCGATGACTTGTCGGGCGTCGATCCCGCCGGCGCGACGACGATCACGCTGTTCAATCCGACGTGGCATC
AGGGCGTGATCGGCATCGTCGCCGGGCGCCTGAAGGAAAAATTCCATCGTCCGTCATTCACGTTCGCGCTGGCCGACGAG
CGTGGCGAGACGGTCAAGGGCTCGGGGCGCTCGATTCCCGGCTTCCACCTGCGCGACGCGCTTGATCTGGTGTCGAAGCG
CGAGCCGGGCCTGATCGCCAGGTTCGGCGGCCACGCGATGGCGGCGGGCCTGACCATCGCGACCGCCGATCTGCAGCGTT
TCACGGCGGCCTTCGAGCAGATCGGCCGAGAGTGGCTCACGCAGGACGTGCTGGCACGCACGTTGGAGACGGACGGCGAA
CTCGAAGACGCGTATTTCACACCGCAATTCGTCGAGATGCTGGACGCGGCTGTCTGGGGACAGGGCTTTCCCGCGCCCGT
TTTTTCGGGCGAATTCGATGTGATGTCGCAAGCGCTGGTGAAGGACAAACACCTCAAGCTGCAACTGATGCGCGGGCGGC
AGCGCTTCAATGCAATCTGGTTCAATCATACGGAATCGCTGCCGGCACGGACGACGGTTGCGTACCGACTGTCTGCCGAT
TCCTGGAATGGCGTGGCGCGGGTGCAGCTCATCGTTGAACACGCCGTGTCGTAG

Upstream 100 bases:

>100_bases
TGACGCTGTGCGGCGACACCGGCTCCGTCACGCTGAGCGTCACGCGCGGCGATCTGCGCAAATTCTGGCGGCGCCGTCTG
TTTGCGTCGCTTTTCATTGA

Downstream 100 bases:

>100_bases
GCCGGTCTGCGCGCGGCCCTCGCGTCTGGTGATCCGCTATAATTTTGGTTTTTGGTGTAGCGGTTCGGGTTGTGATTTGT
GCCTTCGGCCTTTTGCGCTG

Product: single-stranded-DNA-specific exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 577; Mature: 577

Protein sequence:

>577_residues
MNRFPPDPRMTRIVTRPCSPADAEALIRHGLHPVLARLYASRGVCLPDEVETGLARLTPPASLKGCDTAAALLADAIEGK
RRMLVVADYDCDGATACAVAVRGLRMFGAQIDYLVPNRFEYGYGLTPEIVGLAAQRPGGKPDLLITVDNGIASVDGVEAA
NALGIDVLVTDHHLPGDELPAARAIVNPNQPGCSFPSKCMAGVGVMFYVLLALRAELRTRGAFGETRPEPRLDGLLDLVA
LGTVADVVKLDGNNRVLVAQGLQRIRNGRMQPGIAALFRAAGRDARSASGFDLGFALGPRLNAAGRLSDMSLGIDCLTTD
DVGRAWELAQQLDAMNRERREIEAGMQQQALDDLSGVDPAGATTITLFNPTWHQGVIGIVAGRLKEKFHRPSFTFALADE
RGETVKGSGRSIPGFHLRDALDLVSKREPGLIARFGGHAMAAGLTIATADLQRFTAAFEQIGREWLTQDVLARTLETDGE
LEDAYFTPQFVEMLDAAVWGQGFPAPVFSGEFDVMSQALVKDKHLKLQLMRGRQRFNAIWFNHTESLPARTTVAYRLSAD
SWNGVARVQLIVEHAVS

Sequences:

>Translated_577_residues
MNRFPPDPRMTRIVTRPCSPADAEALIRHGLHPVLARLYASRGVCLPDEVETGLARLTPPASLKGCDTAAALLADAIEGK
RRMLVVADYDCDGATACAVAVRGLRMFGAQIDYLVPNRFEYGYGLTPEIVGLAAQRPGGKPDLLITVDNGIASVDGVEAA
NALGIDVLVTDHHLPGDELPAARAIVNPNQPGCSFPSKCMAGVGVMFYVLLALRAELRTRGAFGETRPEPRLDGLLDLVA
LGTVADVVKLDGNNRVLVAQGLQRIRNGRMQPGIAALFRAAGRDARSASGFDLGFALGPRLNAAGRLSDMSLGIDCLTTD
DVGRAWELAQQLDAMNRERREIEAGMQQQALDDLSGVDPAGATTITLFNPTWHQGVIGIVAGRLKEKFHRPSFTFALADE
RGETVKGSGRSIPGFHLRDALDLVSKREPGLIARFGGHAMAAGLTIATADLQRFTAAFEQIGREWLTQDVLARTLETDGE
LEDAYFTPQFVEMLDAAVWGQGFPAPVFSGEFDVMSQALVKDKHLKLQLMRGRQRFNAIWFNHTESLPARTTVAYRLSAD
SWNGVARVQLIVEHAVS
>Mature_577_residues
MNRFPPDPRMTRIVTRPCSPADAEALIRHGLHPVLARLYASRGVCLPDEVETGLARLTPPASLKGCDTAAALLADAIEGK
RRMLVVADYDCDGATACAVAVRGLRMFGAQIDYLVPNRFEYGYGLTPEIVGLAAQRPGGKPDLLITVDNGIASVDGVEAA
NALGIDVLVTDHHLPGDELPAARAIVNPNQPGCSFPSKCMAGVGVMFYVLLALRAELRTRGAFGETRPEPRLDGLLDLVA
LGTVADVVKLDGNNRVLVAQGLQRIRNGRMQPGIAALFRAAGRDARSASGFDLGFALGPRLNAAGRLSDMSLGIDCLTTD
DVGRAWELAQQLDAMNRERREIEAGMQQQALDDLSGVDPAGATTITLFNPTWHQGVIGIVAGRLKEKFHRPSFTFALADE
RGETVKGSGRSIPGFHLRDALDLVSKREPGLIARFGGHAMAAGLTIATADLQRFTAAFEQIGREWLTQDVLARTLETDGE
LEDAYFTPQFVEMLDAAVWGQGFPAPVFSGEFDVMSQALVKDKHLKLQLMRGRQRFNAIWFNHTESLPARTTVAYRLSAD
SWNGVARVQLIVEHAVS

Specific function: Single-stranded-DNA-specific exonuclease. Required for many types of recombinational events, although the stringency of the requirement for recJ appears to vary with the type of recombinational event monitored and the other recombination gene products whi

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=557, Percent_Identity=48.1149012567325, Blast_Score=482, Evalue=1e-137,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008279
- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 62292; Mature: 62292

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRFPPDPRMTRIVTRPCSPADAEALIRHGLHPVLARLYASRGVCLPDEVETGLARLTPP
CCCCCCCCCCEEEEECCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC
ASLKGCDTAAALLADAIEGKRRMLVVADYDCDGATACAVAVRGLRMFGAQIDYLVPNRFE
CCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCEECEECCCCCC
YGYGLTPEIVGLAAQRPGGKPDLLITVDNGIASVDGVEAANALGIDVLVTDHHLPGDELP
CCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHCCCCEEEEEECCCCCCCCCC
AARAIVNPNQPGCSFPSKCMAGVGVMFYVLLALRAELRTRGAFGETRPEPRLDGLLDLVA
CHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
LGTVADVVKLDGNNRVLVAQGLQRIRNGRMQPGIAALFRAAGRDARSASGFDLGFALGPR
HHHHHHHHEECCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCEEEECCCC
LNAAGRLSDMSLGIDCLTTDDVGRAWELAQQLDAMNRERREIEAGMQQQALDDLSGVDPA
CCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GATTITLFNPTWHQGVIGIVAGRLKEKFHRPSFTFALADERGETVKGSGRSIPGFHLRDA
CCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCCCCCCHHHHHH
LDLVSKREPGLIARFGGHAMAAGLTIATADLQRFTAAFEQIGREWLTQDVLARTLETDGE
HHHHHCCCCCEEEEECCCHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LEDAYFTPQFVEMLDAAVWGQGFPAPVFSGEFDVMSQALVKDKHLKLQLMRGRQRFNAIW
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEE
FNHTESLPARTTVAYRLSADSWNGVARVQLIVEHAVS
ECCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MNRFPPDPRMTRIVTRPCSPADAEALIRHGLHPVLARLYASRGVCLPDEVETGLARLTPP
CCCCCCCCCCEEEEECCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC
ASLKGCDTAAALLADAIEGKRRMLVVADYDCDGATACAVAVRGLRMFGAQIDYLVPNRFE
CCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCEECEECCCCCC
YGYGLTPEIVGLAAQRPGGKPDLLITVDNGIASVDGVEAANALGIDVLVTDHHLPGDELP
CCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHCCCCEEEEEECCCCCCCCCC
AARAIVNPNQPGCSFPSKCMAGVGVMFYVLLALRAELRTRGAFGETRPEPRLDGLLDLVA
CHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
LGTVADVVKLDGNNRVLVAQGLQRIRNGRMQPGIAALFRAAGRDARSASGFDLGFALGPR
HHHHHHHHEECCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCEEEECCCC
LNAAGRLSDMSLGIDCLTTDDVGRAWELAQQLDAMNRERREIEAGMQQQALDDLSGVDPA
CCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GATTITLFNPTWHQGVIGIVAGRLKEKFHRPSFTFALADERGETVKGSGRSIPGFHLRDA
CCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCCCCCCHHHHHH
LDLVSKREPGLIARFGGHAMAAGLTIATADLQRFTAAFEQIGREWLTQDVLARTLETDGE
HHHHHCCCCCEEEEECCCHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LEDAYFTPQFVEMLDAAVWGQGFPAPVFSGEFDVMSQALVKDKHLKLQLMRGRQRFNAIW
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEE
FNHTESLPARTTVAYRLSADSWNGVARVQLIVEHAVS
ECCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1987126; 9278503; 2649886 [H]