| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476200
Identifier: 186476200
GI number: 186476200
Start: 1621614
End: 1622408
Strand: Reverse
Name: 186476200
Synonym: Bphy_1442
Alternate gene names: NA
Gene position: 1622408-1621614 (Counterclockwise)
Preceding gene: 186476201
Following gene: 186476199
Centisome position: 46.63
GC content: 66.67
Gene sequence:
>795_bases TTGAAGAACATCATCCATTTCTCGCATGCCAACGGATTTCCTGCGTCCGTGTACCGAACGATCTTCGCCGAGCTCGCGGA CGACTACGACGTGCGTTTCATCGAGCGGATCGGACACGATGCGCGCTATCCCGTGACGCGCGACTGGCCGCATCTGGTCG AAGAGTTGCTGGATGACATCGGGCGCAATTACGAAAACCCGGTCTGGCTCGTCGGACATTCGCTCGGCGGCTATCTGTCG ATGATGGCGGCGCTCAGAAAGCCGCAATGGGTGCGCGGCGTCGTGATGCTCGATTCGCCCCTGATCGCGGGCTGGCGCAG CAACATGCTGCGCGTGTCGCAATGGACGGGGCTCGACGAGCGGTTGTCGCCCGCGGCCGCGACGCGCACGCGCCGCACCC GCTGGGCGAGCCGCGACGAGGCGTGGCGCCACTTTCACGCGAAGCCTGCGTTCGCGCGCTGGGACGAGCGGGTGCTGTCC GACTACATCGACTTCGGCATCCCGCAGGTGGGCAGCGACGGCACGCGCGAGCTGGCTTTCGACCGGCAGACGGAATACCG GATCTACAAGACCTTGCCGCACACCTTCGGCAGCCGCCTGCTGCGCGGCGCGCCCGTGCCCGTCGGCTTCATTGCCGGCA CGCGCTCGCGGGAAGTGCAGCAGGCCGGCTTGCACGCGACGCGGCGCGTAGCGGGCGAGCACCTGGAGTGGATCGAAGGC AGCCATCTGTTTCCGATGGAGCGGCCGATCGAGACGGCACGCGCCGTGCAGAGGATGCTGCGCGAACTGGAGTGA
Upstream 100 bases:
>100_bases ACTCGAACGCTATCGGCAGACGCATCGCCGATACTGGATGGATCGATGACGAAAGGCCGGCGGCCCAATCAAGAACAAAT CAGAACGGAGGCAAGAGCGC
Downstream 100 bases:
>100_bases AGCGCCGCAATCCGCCGCGCATTGCAGCAGAAAGCACGCCGCGCGGGCGCGCTGAAAAGCACGTTCGATCGGTGCGGACG GGCCGCCCCAGGTATGGGCT
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase Fold Protein; Hydrolases Or Acyltransferases; Alpha/Beta Fold Family Hydrolase; Hydrolase/Acyltransferase; Alpha/Beta Superfamily Hydrolase/Acyltransferase; Hydrolase Protein; Alpha/Beta Hydrolase; Hydrolase Alpha/Beta Family; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Fold Hydrolase; Alpha/Beta Family Hydrolase; Alpha/Beta Hydrolase Fold-Containing Protein; Conserved Hydrolases Or Acyltransferase
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MKNIIHFSHANGFPASVYRTIFAELADDYDVRFIERIGHDARYPVTRDWPHLVEELLDDIGRNYENPVWLVGHSLGGYLS MMAALRKPQWVRGVVMLDSPLIAGWRSNMLRVSQWTGLDERLSPAAATRTRRTRWASRDEAWRHFHAKPAFARWDERVLS DYIDFGIPQVGSDGTRELAFDRQTEYRIYKTLPHTFGSRLLRGAPVPVGFIAGTRSREVQQAGLHATRRVAGEHLEWIEG SHLFPMERPIETARAVQRMLRELE
Sequences:
>Translated_264_residues MKNIIHFSHANGFPASVYRTIFAELADDYDVRFIERIGHDARYPVTRDWPHLVEELLDDIGRNYENPVWLVGHSLGGYLS MMAALRKPQWVRGVVMLDSPLIAGWRSNMLRVSQWTGLDERLSPAAATRTRRTRWASRDEAWRHFHAKPAFARWDERVLS DYIDFGIPQVGSDGTRELAFDRQTEYRIYKTLPHTFGSRLLRGAPVPVGFIAGTRSREVQQAGLHATRRVAGEHLEWIEG SHLFPMERPIETARAVQRMLRELE >Mature_264_residues MKNIIHFSHANGFPASVYRTIFAELADDYDVRFIERIGHDARYPVTRDWPHLVEELLDDIGRNYENPVWLVGHSLGGYLS MMAALRKPQWVRGVVMLDSPLIAGWRSNMLRVSQWTGLDERLSPAAATRTRRTRWASRDEAWRHFHAKPAFARWDERVLS DYIDFGIPQVGSDGTRELAFDRQTEYRIYKTLPHTFGSRLLRGAPVPVGFIAGTRSREVQQAGLHATRRVAGEHLEWIEG SHLFPMERPIETARAVQRMLRELE
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30516; Mature: 30516
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNIIHFSHANGFPASVYRTIFAELADDYDVRFIERIGHDARYPVTRDWPHLVEELLDDI CCCCEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH GRNYENPVWLVGHSLGGYLSMMAALRKPQWVRGVVMLDSPLIAGWRSNMLRVSQWTGLDE CCCCCCCEEEEECCHHHHHHHHHHHCCCHHHEEEEEECCCHHHHHHHCCEEHHHHCCCHH RLSPAAATRTRRTRWASRDEAWRHFHAKPAFARWDERVLSDYIDFGIPQVGSDGTRELAF HHCCHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHC DRQTEYRIYKTLPHTFGSRLLRGAPVPVGFIAGTRSREVQQAGLHATRRVAGEHLEWIEG CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCC SHLFPMERPIETARAVQRMLRELE CCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MKNIIHFSHANGFPASVYRTIFAELADDYDVRFIERIGHDARYPVTRDWPHLVEELLDDI CCCCEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH GRNYENPVWLVGHSLGGYLSMMAALRKPQWVRGVVMLDSPLIAGWRSNMLRVSQWTGLDE CCCCCCCEEEEECCHHHHHHHHHHHCCCHHHEEEEEECCCHHHHHHHCCEEHHHHCCCHH RLSPAAATRTRRTRWASRDEAWRHFHAKPAFARWDERVLSDYIDFGIPQVGSDGTRELAF HHCCHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHC DRQTEYRIYKTLPHTFGSRLLRGAPVPVGFIAGTRSREVQQAGLHATRRVAGEHLEWIEG CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCC SHLFPMERPIETARAVQRMLRELE CCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA