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The map label for this gene is yrdA [C]

Identifier: 186476193

GI number: 186476193

Start: 1614779

End: 1615303

Strand: Direct

Name: yrdA [C]

Synonym: Bphy_1435

Alternate gene names: 186476193

Gene position: 1614779-1615303 (Clockwise)

Preceding gene: 186476182

Following gene: 186476194

Centisome position: 46.41

GC content: 59.81

Gene sequence:

>525_bases
GTGGCAATCTACAAGCTTGGCGACGCAGCCCCGACCATCCACGAAAGCGTGTTCGTTGCGGACACGGCGACGATCATCGG
CGACGTGACGCTCGAAGAAAATGCCAGTGTGTGGTTCGGCGCGTCGATTCGCGGCGACAACGAGCCGATCACGATCGGCA
AGGGCACTAACATACAGGAGAGTGCCGTCCTGCACGCCGATCCTGGCTTTCCGCTGACGCTGGAAGCGGGCGTGACGGTG
GGCCACCAGGCGATGCTGCATGGTTGCACGGTCAAGGAAGGCGCGCTAATCGGCATCCAGGCCGTGGTCTTGAATGGAGC
GGTAATCGGCCGCAATTGTCTGGTTGGCGCAGGCGCCGTCGTTACCGAAGGCAAGGTTTTTCCTGACAATTCTTTGATTC
TCGGCTCGCCCGCGAAGGTCGTCCGGGAGTTGACTGAAGCAGATATCAAAGGCCTTAAGCGCGCCGCAGACATTTATGTG
GAACGCAGGGACTATTTCAAGGCGCAGCTCGTGCGCATCGGCTAG

Upstream 100 bases:

>100_bases
ACGCGATTCGAGCATGCCGCGCGCAATGCCCATATTTCGCGCACTTCGCTGCGCCTGCCCATTCGACGGCAGCGCAGCGC
CCGAGACCCGAGGAGACACC

Downstream 100 bases:

>100_bases
TGGCCGACCGCACGGCGCACCACGCGCGGCTTTCCCACCGCGCGGTTTCGACCGAGGAAAAGTTGTGAGTGACCAGTTGC
AAAAATTCATGTTCAGCGCG

Product: hexapaptide repeat-containing transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MAIYKLGDAAPTIHESVFVADTATIIGDVTLEENASVWFGASIRGDNEPITIGKGTNIQESAVLHADPGFPLTLEAGVTV
GHQAMLHGCTVKEGALIGIQAVVLNGAVIGRNCLVGAGAVVTEGKVFPDNSLILGSPAKVVRELTEADIKGLKRAADIYV
ERRDYFKAQLVRIG

Sequences:

>Translated_174_residues
MAIYKLGDAAPTIHESVFVADTATIIGDVTLEENASVWFGASIRGDNEPITIGKGTNIQESAVLHADPGFPLTLEAGVTV
GHQAMLHGCTVKEGALIGIQAVVLNGAVIGRNCLVGAGAVVTEGKVFPDNSLILGSPAKVVRELTEADIKGLKRAADIYV
ERRDYFKAQLVRIG
>Mature_173_residues
AIYKLGDAAPTIHESVFVADTATIIGDVTLEENASVWFGASIRGDNEPITIGKGTNIQESAVLHADPGFPLTLEAGVTVG
HQAMLHGCTVKEGALIGIQAVVLNGAVIGRNCLVGAGAVVTEGKVFPDNSLILGSPAKVVRELTEADIKGLKRAADIYVE
RRDYFKAQLVRIG

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=169, Percent_Identity=37.8698224852071, Blast_Score=125, Evalue=1e-30,
Organism=Escherichia coli, GI1787667, Length=159, Percent_Identity=42.1383647798742, Blast_Score=124, Evalue=3e-30,
Organism=Escherichia coli, GI87081681, Length=152, Percent_Identity=32.8947368421053, Blast_Score=91, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18235; Mature: 18104

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIYKLGDAAPTIHESVFVADTATIIGDVTLEENASVWFGASIRGDNEPITIGKGTNIQE
CEEEECCCCCCCHHCEEEEEECEEEEEEEEECCCCCEEEEEEECCCCCCEEEECCCCCCC
SAVLHADPGFPLTLEAGVTVGHQAMLHGCTVKEGALIGIQAVVLNGAVIGRNCLVGAGAV
CEEEECCCCCCEEEECCCEECCHHHHCCCEECCCCEEEEEEEEECCEEECCCEEEECCEE
VTEGKVFPDNSLILGSPAKVVRELTEADIKGLKRAADIYVERRDYFKAQLVRIG
EECCEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECC
>Mature Secondary Structure 
AIYKLGDAAPTIHESVFVADTATIIGDVTLEENASVWFGASIRGDNEPITIGKGTNIQE
EEEECCCCCCCHHCEEEEEECEEEEEEEEECCCCCEEEEEEECCCCCCEEEECCCCCCC
SAVLHADPGFPLTLEAGVTVGHQAMLHGCTVKEGALIGIQAVVLNGAVIGRNCLVGAGAV
CEEEECCCCCCEEEECCCEECCHHHHCCCEECCCCEEEEEEEEECCEEECCCEEEECCEE
VTEGKVFPDNSLILGSPAKVVRELTEADIKGLKRAADIYVERRDYFKAQLVRIG
EECCEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]