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The map label for this gene is yccA [H]

Identifier: 186476182

GI number: 186476182

Start: 1604769

End: 1605467

Strand: Direct

Name: yccA [H]

Synonym: Bphy_1424

Alternate gene names: 186476182

Gene position: 1604769-1605467 (Clockwise)

Preceding gene: 186476164

Following gene: 186476193

Centisome position: 46.12

GC content: 60.09

Gene sequence:

>699_bases
ATGAACGAATATCCCTATAACTTTGGCCGCGGCGGTTCCATCACCACGGCCGAGACCCGCAACCGGGTGCTGCGCAACAC
CTACTGGCTGCTCGCGCTGTCGATGCTGCCGACTGTGCTCGGCGCGTGGGTAGGCGTGGCGACCGGCTTCTCGCTGTTCG
CCGCCACCAGCCCGGCCATGAGCATGCTCGCGTTCTTCGCGATCGCGTTCGGCTTCATGTTCGCGATTCAGAAGACGAAA
GACAGCGCCGCCGGCGTGTTCGTGCTGCTCGGCTTCACGTTCTTTATGGGCCTGATGCTGTCGCGCCTGCTGAGCTTCAT
CCTCGGCTTTTCGAACGGGCCGTCGCTGATCATGCTCGCCTTTGGTGGCACTGGTGTGATCTTCGCGGCAATGGCAACCA
TCGCCACCGTCAGCAAGCGCGACTTCTCGGGCCTCGGCAAGTGGTTGTTCATGGGCGTGATCGTGCTGCTGCTGGCCATG
GTCGCAAACGTGTTTCTACAATTGCCCGCGCTGATGCTGACGGTGTCCGTGCTTGCCATCGTTATTTTCTCGGCCTACAT
GCTGTTCGACGTGCAGCGCGTCGTGAACGGCGGTGAGACCAACTACATCACGGCGACATTGGCAATCTATCTCGACCTGT
ACAACGTATTCGTGAACCTGCTGTCGATCCTCGGCATCTTCGGCGGCAACCGCAATTGA

Upstream 100 bases:

>100_bases
AGGGTTGTGGGTTCGCGTGACGGATGGCAATCGCCCGCCGCACCGTACGAAAACCGTTGCAAGCCACGTCGCAACACCGC
GTCTGACGCAAGGAGAGACC

Downstream 100 bases:

>100_bases
CCGAGGCTGACCGCTAGCTAATGGCTAGTGGCGGCTAGTGGCCGGCCAAAAACAGAAACGCCCGTGACGCGCCACGTCAC
GGGCGTTTCTGTTTTTGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MNEYPYNFGRGGSITTAETRNRVLRNTYWLLALSMLPTVLGAWVGVATGFSLFAATSPAMSMLAFFAIAFGFMFAIQKTK
DSAAGVFVLLGFTFFMGLMLSRLLSFILGFSNGPSLIMLAFGGTGVIFAAMATIATVSKRDFSGLGKWLFMGVIVLLLAM
VANVFLQLPALMLTVSVLAIVIFSAYMLFDVQRVVNGGETNYITATLAIYLDLYNVFVNLLSILGIFGGNRN

Sequences:

>Translated_232_residues
MNEYPYNFGRGGSITTAETRNRVLRNTYWLLALSMLPTVLGAWVGVATGFSLFAATSPAMSMLAFFAIAFGFMFAIQKTK
DSAAGVFVLLGFTFFMGLMLSRLLSFILGFSNGPSLIMLAFGGTGVIFAAMATIATVSKRDFSGLGKWLFMGVIVLLLAM
VANVFLQLPALMLTVSVLAIVIFSAYMLFDVQRVVNGGETNYITATLAIYLDLYNVFVNLLSILGIFGGNRN
>Mature_232_residues
MNEYPYNFGRGGSITTAETRNRVLRNTYWLLALSMLPTVLGAWVGVATGFSLFAATSPAMSMLAFFAIAFGFMFAIQKTK
DSAAGVFVLLGFTFFMGLMLSRLLSFILGFSNGPSLIMLAFGGTGVIFAAMATIATVSKRDFSGLGKWLFMGVIVLLLAM
VANVFLQLPALMLTVSVLAIVIFSAYMLFDVQRVVNGGETNYITATLAIYLDLYNVFVNLLSILGIFGGNRN

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family [H]

Homologues:

Organism=Escherichia coli, GI1787205, Length=211, Percent_Identity=38.8625592417062, Blast_Score=134, Evalue=6e-33,
Organism=Escherichia coli, GI1787004, Length=113, Percent_Identity=35.3982300884956, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006213
- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 25086; Mature: 25086

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEYPYNFGRGGSITTAETRNRVLRNTYWLLALSMLPTVLGAWVGVATGFSLFAATSPAM
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
SMLAFFAIAFGFMFAIQKTKDSAAGVFVLLGFTFFMGLMLSRLLSFILGFSNGPSLIMLA
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
FGGTGVIFAAMATIATVSKRDFSGLGKWLFMGVIVLLLAMVANVFLQLPALMLTVSVLAI
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIFSAYMLFDVQRVVNGGETNYITATLAIYLDLYNVFVNLLSILGIFGGNRN
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNEYPYNFGRGGSITTAETRNRVLRNTYWLLALSMLPTVLGAWVGVATGFSLFAATSPAM
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
SMLAFFAIAFGFMFAIQKTKDSAAGVFVLLGFTFFMGLMLSRLLSFILGFSNGPSLIMLA
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
FGGTGVIFAAMATIATVSKRDFSGLGKWLFMGVIVLLLAMVANVFLQLPALMLTVSVLAI
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIFSAYMLFDVQRVVNGGETNYITATLAIYLDLYNVFVNLLSILGIFGGNRN
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]