| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
Click here to switch to the map view.
The map label for this gene is 186476103
Identifier: 186476103
GI number: 186476103
Start: 1508022
End: 1509257
Strand: Reverse
Name: 186476103
Synonym: Bphy_1345
Alternate gene names: NA
Gene position: 1509257-1508022 (Counterclockwise)
Preceding gene: 186476104
Following gene: 186476101
Centisome position: 43.38
GC content: 66.67
Gene sequence:
>1236_bases ATGGACGAGTTGACACTCGGTTTGATCGGCGCGGGCGCCGTGGTGGTCGGGGGGGTGGTGGTTTACAACGCGTGGCAGGG AGCGAAGGTGCGCCGCAAGATGCCACGGCCGATGCCTGCCGATGCGGCAGAACCGCTCGCCCGGGAGGACCAGGACGAGC AGAGCCCCTTCATCGAGCCGGCGCGTCCGACGACGCGCCGCGAATCGGCGCCGGGCGAGCATGCGGAAGCCGCACGGGTC GAACCGACCTTCGGCGGCGCTGCGCCGCTCGACACGCCGGCCGACATCCAGGCCGAAAACACCTTGCCGAATGGCTTCCC AGAAGAGGAAGGGGCCGTGCTCCCCTCGGGCGAACAGCTTGCCGAGGAGGAGCGCAGCGAGCCGATCCTGCCCGCTGCGA CGACCATTTCTTCCGCGCCGCCCGCCATCGTCGATCGACGGATCGACTGCATCGTGCCCGTCAGACTGTCTGCACCCGTC ATGGGCGACAAGGTGCTGCCGCTCGCGCAGCGGCTGCGTCGCGCGGGCAGCAAGCCGGTGCATATTGAAGGCAAGCCTGA AGGCGGCGCATGGGAACTGCTGCAAAACGGCGTGCGCTACGAAGAACTGCGCGCGGCTGCGCAGTTGGCGAACCGCAGCG GACCGCTCAACGAACTGGAGTTCTCCGAGTTCGTGACGGGTGTCCAGCAATTCGCGGATGCGCTCGACGCCTCGCCGGAG TTTCCGGACATGATGGAAACGGTGGCGATGGCGCGCGAACTCGACGGCTTTGCCGCGCAGTGCGATGCGCAGCTGTCGAT CAACGTGCTGTCCGACGGCGCGCCGTGGTCGGCGAACTATGTGCAGGCCGTCGCGTCGCAGGACGGACTGCTGCTGTCGC GCGACGGTACGCGCTTCGTCAAGCTGGACGTGAAGCAGAGTCCCGTTTTCATGCTGCAGTTTGGCGACACCAACTTCCTG CGCGACGATCTGACGTATAAGGGCGGCCAGATGATCACGCTGGTGCTCGACGTGCCCGTCGCCGATGAAGACATTCTGCC GTTCCGTCTGATGTGCGACTACGCCAAATCGTTGGCCGAGCGCATCGGCGGGCGCGTGGTCGACGACGGCCGCCGCCCGC TGCCGGAGAGCGCGCTGCTCGCGATCGAAAAACAGTTGATGACGCTGTATGCCAAGCTCGAGCAGGCAGGTATCCCGGCT GGCTCGCCCGCGACGCGGCGGCTGTTCAGCCAGTAA
Upstream 100 bases:
>100_bases TCGCCCGCAGCGGCGGCGCGTGGCACCTTGTGTGCCACCAGCCAGCCGCGCGACCCCGGCGCCGTGCGCAACGACGAAAA GAATTGCAGATGGAGCGTGC
Downstream 100 bases:
>100_bases GCGCAGCGGATGAACTGCTGAGCGCTGCTTGTGCTTCCACCCATAAACTGCCTGATGCACCGTCGTTGCTTCAGGTGGTT TTCAGTTTGGGCTTCCATTC
Product: FtsZ-binding protein ZipA
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 411; Mature: 411
Protein sequence:
>411_residues MDELTLGLIGAGAVVVGGVVVYNAWQGAKVRRKMPRPMPADAAEPLAREDQDEQSPFIEPARPTTRRESAPGEHAEAARV EPTFGGAAPLDTPADIQAENTLPNGFPEEEGAVLPSGEQLAEEERSEPILPAATTISSAPPAIVDRRIDCIVPVRLSAPV MGDKVLPLAQRLRRAGSKPVHIEGKPEGGAWELLQNGVRYEELRAAAQLANRSGPLNELEFSEFVTGVQQFADALDASPE FPDMMETVAMARELDGFAAQCDAQLSINVLSDGAPWSANYVQAVASQDGLLLSRDGTRFVKLDVKQSPVFMLQFGDTNFL RDDLTYKGGQMITLVLDVPVADEDILPFRLMCDYAKSLAERIGGRVVDDGRRPLPESALLAIEKQLMTLYAKLEQAGIPA GSPATRRLFSQ
Sequences:
>Translated_411_residues MDELTLGLIGAGAVVVGGVVVYNAWQGAKVRRKMPRPMPADAAEPLAREDQDEQSPFIEPARPTTRRESAPGEHAEAARV EPTFGGAAPLDTPADIQAENTLPNGFPEEEGAVLPSGEQLAEEERSEPILPAATTISSAPPAIVDRRIDCIVPVRLSAPV MGDKVLPLAQRLRRAGSKPVHIEGKPEGGAWELLQNGVRYEELRAAAQLANRSGPLNELEFSEFVTGVQQFADALDASPE FPDMMETVAMARELDGFAAQCDAQLSINVLSDGAPWSANYVQAVASQDGLLLSRDGTRFVKLDVKQSPVFMLQFGDTNFL RDDLTYKGGQMITLVLDVPVADEDILPFRLMCDYAKSLAERIGGRVVDDGRRPLPESALLAIEKQLMTLYAKLEQAGIPA GSPATRRLFSQ >Mature_411_residues MDELTLGLIGAGAVVVGGVVVYNAWQGAKVRRKMPRPMPADAAEPLAREDQDEQSPFIEPARPTTRRESAPGEHAEAARV EPTFGGAAPLDTPADIQAENTLPNGFPEEEGAVLPSGEQLAEEERSEPILPAATTISSAPPAIVDRRIDCIVPVRLSAPV MGDKVLPLAQRLRRAGSKPVHIEGKPEGGAWELLQNGVRYEELRAAAQLANRSGPLNELEFSEFVTGVQQFADALDASPE FPDMMETVAMARELDGFAAQCDAQLSINVLSDGAPWSANYVQAVASQDGLLLSRDGTRFVKLDVKQSPVFMLQFGDTNFL RDDLTYKGGQMITLVLDVPVADEDILPFRLMCDYAKSLAERIGGRVVDDGRRPLPESALLAIEKQLMTLYAKLEQAGIPA GSPATRRLFSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44364; Mature: 44364
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDELTLGLIGAGAVVVGGVVVYNAWQGAKVRRKMPRPMPADAAEPLAREDQDEQSPFIEP CCCCEEEECCCCHHHHCCEEEEECCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCC ARPTTRRESAPGEHAEAARVEPTFGGAAPLDTPADIQAENTLPNGFPEEEGAVLPSGEQL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHH AEEERSEPILPAATTISSAPPAIVDRRIDCIVPVRLSAPVMGDKVLPLAQRLRRAGSKPV HHHHHCCCCCCHHHHCCCCCCHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCE HIEGKPEGGAWELLQNGVRYEELRAAAQLANRSGPLNELEFSEFVTGVQQFADALDASPE EEECCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC FPDMMETVAMARELDGFAAQCDAQLSINVLSDGAPWSANYVQAVASQDGLLLSRDGTRFV CHHHHHHHHHHHHHCCHHHHCCCEEEEEEECCCCCCCHHHHHHHHCCCCEEEECCCCEEE KLDVKQSPVFMLQFGDTNFLRDDLTYKGGQMITLVLDVPVADEDILPFRLMCDYAKSLAE EEEECCCCEEEEEECCCCHHHHCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHH RIGGRVVDDGRRPLPESALLAIEKQLMTLYAKLEQAGIPAGSPATRRLFSQ HHCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCC >Mature Secondary Structure MDELTLGLIGAGAVVVGGVVVYNAWQGAKVRRKMPRPMPADAAEPLAREDQDEQSPFIEP CCCCEEEECCCCHHHHCCEEEEECCCCCHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCC ARPTTRRESAPGEHAEAARVEPTFGGAAPLDTPADIQAENTLPNGFPEEEGAVLPSGEQL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHH AEEERSEPILPAATTISSAPPAIVDRRIDCIVPVRLSAPVMGDKVLPLAQRLRRAGSKPV HHHHHCCCCCCHHHHCCCCCCHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCE HIEGKPEGGAWELLQNGVRYEELRAAAQLANRSGPLNELEFSEFVTGVQQFADALDASPE EEECCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC FPDMMETVAMARELDGFAAQCDAQLSINVLSDGAPWSANYVQAVASQDGLLLSRDGTRFV CHHHHHHHHHHHHHCCHHHHCCCEEEEEEECCCCCCCHHHHHHHHCCCCEEEECCCCEEE KLDVKQSPVFMLQFGDTNFLRDDLTYKGGQMITLVLDVPVADEDILPFRLMCDYAKSLAE EEEECCCCEEEEEECCCCHHHHCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHH RIGGRVVDDGRRPLPESALLAIEKQLMTLYAKLEQAGIPAGSPATRRLFSQ HHCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA