| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476071
Identifier: 186476071
GI number: 186476071
Start: 1471901
End: 1472725
Strand: Reverse
Name: 186476071
Synonym: Bphy_1313
Alternate gene names: NA
Gene position: 1472725-1471901 (Counterclockwise)
Preceding gene: 186476072
Following gene: 186476070
Centisome position: 42.33
GC content: 69.82
Gene sequence:
>825_bases ATGAAGCCGCTGCTGCGTGCCGTACTGATCATCGATGCCTTGTTGTTGCTGGCATTCGGGCTGCTACTCCTGCTCACGCC GTGGAAGTCGCTGTACGACGCGCTGCAGCTGGTGCAGACCGACCCTGTGCTGGTCGGGCAGGGAGCGGGCATTGCGCTGA TCGGTCTCGCCTGGCTGGCGCTGCATGCGTCGATCGACGGCGCGATGACGGTGACGACGGCCAAGGTCGTCGGCCATGTG AACTGGTTGACGGGCGTGCTGATGCTGGTCTGGCTGCTCTTGCGACACGTGCCGCAGTTGACGGGTTTCGGCCAGCTGGT GGCAGTGGTGACGGGCGTGGTGCTGCTCGTGATCGGCCTGGGCGGCGTGAAGCTCTCGAGCGCCGTCAGGCGACGCGAGC GGATGGCCGGTAAGGCTGTGGGCGAACGAGCGGACCGCGTCGCAACGCGTGAAGCCGAGAACGAAGCGCGCAAGGCCGAG CGGGAGCGTCAGGTTGCGCGTCCGGGTGTCGTATATCCGGCAACGGGAGCGCACGTCGAGCCGACGCTGGGCGGCACGCC GACGGCGAGCTCGCGGCCCGTTAGCCCTGCGACGGGCCATCCCGTCGAGCCGGGCCTGACGGCTGCGGCATCGCGCCCGA TGATGCCCGAAGCGGCCGCCGCCGCACGCGAGGATGCGCTCGCGCATAAGCGTCGGGCCGATGCCCACGAAGACGCCGCC GCGCGCGAACGTGCCGCGGCCGAGCGTAGCGCAGCGGACGCCCGTTCCGCCGAAGCGAAACCCGGCTCGCCATCCGGCAC ACCGCGGCCGCCGTTTCATGGCTGA
Upstream 100 bases:
>100_bases CTCGTTCGTCGAAATCACCGCGGCGGGCATGCGCGAATCCCACGTGCACGATGTGCAGATCACGAAGGAAGCCCCTAACT ACCACGTGGACTAATTGCCG
Downstream 100 bases:
>100_bases CGTGCGCAAGCTCACGCCCGCTGCCGATACAACCGGAATCCGTCTGCGCGCAGTTCTTGATCGAGTGTCTGGCCAATCGC GGCACGCTGCGGTGTTTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MKPLLRAVLIIDALLLLAFGLLLLLTPWKSLYDALQLVQTDPVLVGQGAGIALIGLAWLALHASIDGAMTVTTAKVVGHV NWLTGVLMLVWLLLRHVPQLTGFGQLVAVVTGVVLLVIGLGGVKLSSAVRRRERMAGKAVGERADRVATREAENEARKAE RERQVARPGVVYPATGAHVEPTLGGTPTASSRPVSPATGHPVEPGLTAAASRPMMPEAAAAAREDALAHKRRADAHEDAA ARERAAAERSAADARSAEAKPGSPSGTPRPPFHG
Sequences:
>Translated_274_residues MKPLLRAVLIIDALLLLAFGLLLLLTPWKSLYDALQLVQTDPVLVGQGAGIALIGLAWLALHASIDGAMTVTTAKVVGHV NWLTGVLMLVWLLLRHVPQLTGFGQLVAVVTGVVLLVIGLGGVKLSSAVRRRERMAGKAVGERADRVATREAENEARKAE RERQVARPGVVYPATGAHVEPTLGGTPTASSRPVSPATGHPVEPGLTAAASRPMMPEAAAAAREDALAHKRRADAHEDAA ARERAAAERSAADARSAEAKPGSPSGTPRPPFHG >Mature_274_residues MKPLLRAVLIIDALLLLAFGLLLLLTPWKSLYDALQLVQTDPVLVGQGAGIALIGLAWLALHASIDGAMTVTTAKVVGHV NWLTGVLMLVWLLLRHVPQLTGFGQLVAVVTGVVLLVIGLGGVKLSSAVRRRERMAGKAVGERADRVATREAENEARKAE RERQVARPGVVYPATGAHVEPTLGGTPTASSRPVSPATGHPVEPGLTAAASRPMMPEAAAAAREDALAHKRRADAHEDAA ARERAAAERSAADARSAEAKPGSPSGTPRPPFHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28665; Mature: 28665
Theoretical pI: Translated: 10.78; Mature: 10.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPLLRAVLIIDALLLLAFGLLLLLTPWKSLYDALQLVQTDPVLVGQGAGIALIGLAWLA CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHH LHASIDGAMTVTTAKVVGHVNWLTGVLMLVWLLLRHVPQLTGFGQLVAVVTGVVLLVIGL HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC GGVKLSSAVRRRERMAGKAVGERADRVATREAENEARKAERERQVARPGVVYPATGAHVE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCC PTLGGTPTASSRPVSPATGHPVEPGLTAAASRPMMPEAAAAAREDALAHKRRADAHEDAA CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHH ARERAAAERSAADARSAEAKPGSPSGTPRPPFHG HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKPLLRAVLIIDALLLLAFGLLLLLTPWKSLYDALQLVQTDPVLVGQGAGIALIGLAWLA CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHH LHASIDGAMTVTTAKVVGHVNWLTGVLMLVWLLLRHVPQLTGFGQLVAVVTGVVLLVIGL HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC GGVKLSSAVRRRERMAGKAVGERADRVATREAENEARKAERERQVARPGVVYPATGAHVE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCC PTLGGTPTASSRPVSPATGHPVEPGLTAAASRPMMPEAAAAAREDALAHKRRADAHEDAA CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHH ARERAAAERSAADARSAEAKPGSPSGTPRPPFHG HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA