| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is hyuE [H]
Identifier: 186476059
GI number: 186476059
Start: 1459273
End: 1460130
Strand: Reverse
Name: hyuE [H]
Synonym: Bphy_1301
Alternate gene names: 186476059
Gene position: 1460130-1459273 (Counterclockwise)
Preceding gene: 186476060
Following gene: 186476058
Centisome position: 41.97
GC content: 68.76
Gene sequence:
>858_bases ATGCGGATCAAACTGATCAACCCGAACACGACGCAACGGATGACGGAAGCGATGGGCCGTTGTGCCCGCAACGTCGTGGC GCCGGGCACGGAGCTGGTGGCGGTGAGCCCGACGATGGGGCCTCCGTCGATCGAGGGCTATTACGACGAGGCGCTCGCCA CGCCAGGGCTGCTCGCAGAAATCGAAGCGGGCGAGCGCGAAGGTTTCGATGGTTATGTGATTGCATGTTTCGGCGATCCC GGCCTCTATGCGGCGCGCGAACTGGCGCGCGGTCCAGTGATCGGCATCGCGGAGGCGGCGATGCACGCGGCGAGCGTGCT GGCGCCGGGCTTCTCGGTGGTGACGACGCTGTCGCGCACCTGTGGCATGGCCTGGCATCTGGCCGAGCGCTATGGCATGA AGCGCTTTTGCCGCAACGTCCGCGCCACCGACGTGGCGGTGCTGGAGCTCGATCAGCCCGGCTCGGCTGCGCGGCGCATC ATTCTCGACGAATGCCGCCGGGCACTCGACGAGGATGGGGCGGATGCGATCGTGCTCGGTTGCGCGGGGATGGCCGAGCT GTGCAGGGAGCTCGAGGATGCGCTGGGCGCGCCCGTCGTCGAAGGCGTGACGGCGGCCGTGAAGTGGGTGGAGGCGCTCG TCGCGCTACGCCTCGCGACGGCCAAGCGCGGCGACTACGCAAGGCCGCTGCGCAAGCGCTATGACGGCGAGTTCGCACGC TTCAGTCCGGCAGGCCCGCAGCCGGCTGCGGCACCCTCGCTGCAGCATACCGCCAGCGACGCGCTGCTGCGGGTCGATGC GAGTGCCCTGCGCGCCGATCCCGCCGCCGATATTGCACCGCACATACACTCTGTCTGA
Upstream 100 bases:
>100_bases GGGGCTCGGTGCAGTGTTCTACGGCGGACTTGCCCGCAACCTGCAACGTGGTGCATGAAGCAGGCATGACAGTTCATCAA AGGCAGCAACGGGAGTCGAC
Downstream 100 bases:
>100_bases CATGCACTATCTGCCCGGGTGTATGGGCGCATCCGGGCGTTTTCGCTACACTGGTTCAACCATGCCGGCCTTGCCGTAGC GCGTTTTCGCGCTTGCACGA
Product: Asp/Glu/hydantoin racemase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MRIKLINPNTTQRMTEAMGRCARNVVAPGTELVAVSPTMGPPSIEGYYDEALATPGLLAEIEAGEREGFDGYVIACFGDP GLYAARELARGPVIGIAEAAMHAASVLAPGFSVVTTLSRTCGMAWHLAERYGMKRFCRNVRATDVAVLELDQPGSAARRI ILDECRRALDEDGADAIVLGCAGMAELCRELEDALGAPVVEGVTAAVKWVEALVALRLATAKRGDYARPLRKRYDGEFAR FSPAGPQPAAAPSLQHTASDALLRVDASALRADPAADIAPHIHSV
Sequences:
>Translated_285_residues MRIKLINPNTTQRMTEAMGRCARNVVAPGTELVAVSPTMGPPSIEGYYDEALATPGLLAEIEAGEREGFDGYVIACFGDP GLYAARELARGPVIGIAEAAMHAASVLAPGFSVVTTLSRTCGMAWHLAERYGMKRFCRNVRATDVAVLELDQPGSAARRI ILDECRRALDEDGADAIVLGCAGMAELCRELEDALGAPVVEGVTAAVKWVEALVALRLATAKRGDYARPLRKRYDGEFAR FSPAGPQPAAAPSLQHTASDALLRVDASALRADPAADIAPHIHSV >Mature_285_residues MRIKLINPNTTQRMTEAMGRCARNVVAPGTELVAVSPTMGPPSIEGYYDEALATPGLLAEIEAGEREGFDGYVIACFGDP GLYAARELARGPVIGIAEAAMHAASVLAPGFSVVTTLSRTCGMAWHLAERYGMKRFCRNVRATDVAVLELDQPGSAARRI ILDECRRALDEDGADAIVLGCAGMAELCRELEDALGAPVVEGVTAAVKWVEALVALRLATAKRGDYARPLRKRYDGEFAR FSPAGPQPAAAPSLQHTASDALLRVDASALRADPAADIAPHIHSV
Specific function: Responsible for racemization of the D-5-substituted hydantoins to their corresponding L-amino acids [H]
COG id: COG4126
COG function: function code E; Hydantoin racemase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To yeast DCG1 and S.pombe SPAC1F7.10 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015942 [H]
Pfam domain/function: PF01177 Asp_Glu_race [H]
EC number: =5.1.99.5 [H]
Molecular weight: Translated: 30208; Mature: 30208
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIKLINPNTTQRMTEAMGRCARNVVAPGTELVAVSPTMGPPSIEGYYDEALATPGLLAE CEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHCCCCCEEE IEAGEREGFDGYVIACFGDPGLYAARELARGPVIGIAEAAMHAASVLAPGFSVVTTLSRT ECCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH CGMAWHLAERYGMKRFCRNVRATDVAVLELDQPGSAARRIILDECRRALDEDGADAIVLG HHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEE CAGMAELCRELEDALGAPVVEGVTAAVKWVEALVALRLATAKRGDYARPLRKRYDGEFAR CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEE FSPAGPQPAAAPSLQHTASDALLRVDASALRADPAADIAPHIHSV CCCCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCHHHCCHHCCC >Mature Secondary Structure MRIKLINPNTTQRMTEAMGRCARNVVAPGTELVAVSPTMGPPSIEGYYDEALATPGLLAE CEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHCCCCCEEE IEAGEREGFDGYVIACFGDPGLYAARELARGPVIGIAEAAMHAASVLAPGFSVVTTLSRT ECCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH CGMAWHLAERYGMKRFCRNVRATDVAVLELDQPGSAARRIILDECRRALDEDGADAIVLG HHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEE CAGMAELCRELEDALGAPVVEGVTAAVKWVEALVALRLATAKRGDYARPLRKRYDGEFAR CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEE FSPAGPQPAAAPSLQHTASDALLRVDASALRADPAADIAPHIHSV CCCCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1339422 [H]