| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476032
Identifier: 186476032
GI number: 186476032
Start: 1428453
End: 1429934
Strand: Direct
Name: 186476032
Synonym: Bphy_1273
Alternate gene names: NA
Gene position: 1428453-1429934 (Clockwise)
Preceding gene: 186476030
Following gene: 186476034
Centisome position: 41.06
GC content: 61.27
Gene sequence:
>1482_bases ATGCCCTCCTCCCGTCCTGCTGAGCTGCGTATCGCGATTGTTGGAAGCGGCTTCTCAGGCATCGGCATGGCGATCCGGCT CAAGCGGCTCGGTTATGCATCGGTGTCGATCTACGAAGCGGCGGCCGAACTGGGCGGCACGTGGCGCGACAACGTCTATC CGGGCGCCGCATGCGATGTCCCCTCGCATCTGTATTCGTTTTCATTCGAAGCGAATCCGGGGTGGACGCGGGCATTCAGT CATCAGCATGAGATCCTCGCGTATCTAAAGCATTGTGCACGCAAGTATCAGGTGGATAGTGCCATTCAGTTCAATGCACG TGTAACGGCGGCCCGTTTCGATGAAGCGCGCCTCGTCTGGCAACTCGACCTCGCACGCAATGGCATGCATGAAACCGTCG AGGCGGACATCGTAATCGCGGCGAGCGGACCGTTGTCGCGTCCCGCGATGCCGCGCATCGACGGGATCGGGTCTTTTAGC GGCAGGATATTTCACTCGGCACGCTGGGATCACGCGTATCCACTCGAAGGCAAGCGCGTCGCAGTCATCGGCACGGGAGC GAGTGCCATCCAGTTCGTACCGCAAATCCAGCCACGCGTCGCACAGTTGCTGCTGTTCCAGCGCACTGCGCCTTGGATCA TGCCCAAGCCCGACAAGCCGACTGGCGAGCGCGCACGTTGGCTCTTCAAGCATCTGCCGTTCACGCAGCGCTTCGTGCGC AACGCGATCTACTGGCAGATGGAGTCGCGTGGCATCGCGTTCTTCGTGAACCCCAGGCTCGCAAATCCAGCGATGAAATT TGCGCGCAGCTATCTTGAACGGCGCGTGAAAGATCCTGCATTACGCGCGAAAGTTACGCCCGACTACAGGCTGGGATGCA AGCGCGTGCTGTTGTCGAGCGACTACTATCCGGCAATCCGCCAGCCGAACGTGGATGTCGTGACGACGCCGATACGCACC ATCGTGCATGACGGCATCGTGACTGCCGACGGCGCGCATCATGCCGTCGATGCGGTCATTTGCGGCACTGGATTTCAGGT CAACGATGTCGGCGCGCCATTCGACGTCGCGGGCATCGGCGGCGCCGATCTCGGCGCGCTGTGGCTGCGCGACGGTCCTG AAGCGTACCTGGGCACAAGCATCGCGGACTTTCCGAACTTCTTCATGTTGGCCGGCCCGAACACGGGCCTGGGTCATAAC TCGATGATCTACATGATCGAGTCCCAGGTGCAATACATTGCCGACTGCCTGCGCGAACTGCGGCGCCGCGGCGCACGCAC GATGAATCTGCGTGCCGACGTGCAGCGCGCATTCAATGAGCGCCTGCAGCTCGACATGCGGCAAACGGTTTGGGCCAGTG GCTGCCATAGCTGGTATCAGACGAAGAGCGGCAAGGTGACCGCGATCTGGCCGGGCTTCACGTTCAGTTTCCGTCGCCGC ACGCGACGTGTGCGCAGCGGCGAGTACACCTATTCACGTTAG
Upstream 100 bases:
>100_bases TGCGCTTAAACCGTCGTAGACGGATGCAGACCAAATCATTTTTATCGTATTCACCATCGGAAGTTCTCGGACTCCGACGA TGCGCCGGAGCACTCGACCT
Downstream 100 bases:
>100_bases GAGCGTGCATAGGACGGGTCGTTCCATGTTGCAAACAACAGGGACAAGAAATGAAGAACTTAGACACGACCCCGTCAATG CATGCGCCGCTGCTGGCCCG
Product: putative flavin-binding monooxygenase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 493; Mature: 492
Protein sequence:
>493_residues MPSSRPAELRIAIVGSGFSGIGMAIRLKRLGYASVSIYEAAAELGGTWRDNVYPGAACDVPSHLYSFSFEANPGWTRAFS HQHEILAYLKHCARKYQVDSAIQFNARVTAARFDEARLVWQLDLARNGMHETVEADIVIAASGPLSRPAMPRIDGIGSFS GRIFHSARWDHAYPLEGKRVAVIGTGASAIQFVPQIQPRVAQLLLFQRTAPWIMPKPDKPTGERARWLFKHLPFTQRFVR NAIYWQMESRGIAFFVNPRLANPAMKFARSYLERRVKDPALRAKVTPDYRLGCKRVLLSSDYYPAIRQPNVDVVTTPIRT IVHDGIVTADGAHHAVDAVICGTGFQVNDVGAPFDVAGIGGADLGALWLRDGPEAYLGTSIADFPNFFMLAGPNTGLGHN SMIYMIESQVQYIADCLRELRRRGARTMNLRADVQRAFNERLQLDMRQTVWASGCHSWYQTKSGKVTAIWPGFTFSFRRR TRRVRSGEYTYSR
Sequences:
>Translated_493_residues MPSSRPAELRIAIVGSGFSGIGMAIRLKRLGYASVSIYEAAAELGGTWRDNVYPGAACDVPSHLYSFSFEANPGWTRAFS HQHEILAYLKHCARKYQVDSAIQFNARVTAARFDEARLVWQLDLARNGMHETVEADIVIAASGPLSRPAMPRIDGIGSFS GRIFHSARWDHAYPLEGKRVAVIGTGASAIQFVPQIQPRVAQLLLFQRTAPWIMPKPDKPTGERARWLFKHLPFTQRFVR NAIYWQMESRGIAFFVNPRLANPAMKFARSYLERRVKDPALRAKVTPDYRLGCKRVLLSSDYYPAIRQPNVDVVTTPIRT IVHDGIVTADGAHHAVDAVICGTGFQVNDVGAPFDVAGIGGADLGALWLRDGPEAYLGTSIADFPNFFMLAGPNTGLGHN SMIYMIESQVQYIADCLRELRRRGARTMNLRADVQRAFNERLQLDMRQTVWASGCHSWYQTKSGKVTAIWPGFTFSFRRR TRRVRSGEYTYSR >Mature_492_residues PSSRPAELRIAIVGSGFSGIGMAIRLKRLGYASVSIYEAAAELGGTWRDNVYPGAACDVPSHLYSFSFEANPGWTRAFSH QHEILAYLKHCARKYQVDSAIQFNARVTAARFDEARLVWQLDLARNGMHETVEADIVIAASGPLSRPAMPRIDGIGSFSG RIFHSARWDHAYPLEGKRVAVIGTGASAIQFVPQIQPRVAQLLLFQRTAPWIMPKPDKPTGERARWLFKHLPFTQRFVRN AIYWQMESRGIAFFVNPRLANPAMKFARSYLERRVKDPALRAKVTPDYRLGCKRVLLSSDYYPAIRQPNVDVVTTPIRTI VHDGIVTADGAHHAVDAVICGTGFQVNDVGAPFDVAGIGGADLGALWLRDGPEAYLGTSIADFPNFFMLAGPNTGLGHNS MIYMIESQVQYIADCLRELRRRGARTMNLRADVQRAFNERLQLDMRQTVWASGCHSWYQTKSGKVTAIWPGFTFSFRRRT RRVRSGEYTYSR
Specific function: Unknown
COG id: COG2072
COG function: function code P; Predicted flavoprotein involved in K+ transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FAD-binding monooxygenase family [H]
Homologues:
Organism=Homo sapiens, GI4503757, Length=359, Percent_Identity=24.5125348189415, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI50541965, Length=221, Percent_Identity=24.8868778280543, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI50541961, Length=221, Percent_Identity=24.8868778280543, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI4503755, Length=225, Percent_Identity=26.6666666666667, Blast_Score=70, Evalue=5e-12, Organism=Caenorhabditis elegans, GI25145785, Length=218, Percent_Identity=24.3119266055046, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI193202226, Length=232, Percent_Identity=24.5689655172414, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020946 [H]
Pfam domain/function: PF00743 FMO-like [H]
EC number: NA
Molecular weight: Translated: 55231; Mature: 55100
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSSRPAELRIAIVGSGFSGIGMAIRLKRLGYASVSIYEAAAELGGTWRDNVYPGAACDV CCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC PSHLYSFSFEANPGWTRAFSHQHEILAYLKHCARKYQVDSAIQFNARVTAARFDEARLVW CHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEEEEECCCEEEEE QLDLARNGMHETVEADIVIAASGPLSRPAMPRIDGIGSFSGRIFHSARWDHAYPLEGKRV EEEHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEE AVIGTGASAIQFVPQIQPRVAQLLLFQRTAPWIMPKPDKPTGERARWLFKHLPFTQRFVR EEEECCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHH NAIYWQMESRGIAFFVNPRLANPAMKFARSYLERRVKDPALRAKVTPDYRLGCKRVLLSS HHHEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCHHHCHHHHHHCC DYYPAIRQPNVDVVTTPIRTIVHDGIVTADGAHHAVDAVICGTGFQVNDVGAPFDVAGIG CCCCCCCCCCCCEEECCHHHHHHCCEEECCCCCHHEEEEEECCCEEECCCCCCEEECCCC GADLGALWLRDGPEAYLGTSIADFPNFFMLAGPNTGLGHNSMIYMIESQVQYIADCLREL CCCCCEEEECCCCCHHHCCCHHHCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHH RRRGARTMNLRADVQRAFNERLQLDMRQTVWASGCHSWYQTKSGKVTAIWPGFTFSFRRR HHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHH TRRVRSGEYTYSR HHHHHCCCCCCCC >Mature Secondary Structure PSSRPAELRIAIVGSGFSGIGMAIRLKRLGYASVSIYEAAAELGGTWRDNVYPGAACDV CCCCCCEEEEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC PSHLYSFSFEANPGWTRAFSHQHEILAYLKHCARKYQVDSAIQFNARVTAARFDEARLVW CHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEEEEECCCEEEEE QLDLARNGMHETVEADIVIAASGPLSRPAMPRIDGIGSFSGRIFHSARWDHAYPLEGKRV EEEHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEE AVIGTGASAIQFVPQIQPRVAQLLLFQRTAPWIMPKPDKPTGERARWLFKHLPFTQRFVR EEEECCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHH NAIYWQMESRGIAFFVNPRLANPAMKFARSYLERRVKDPALRAKVTPDYRLGCKRVLLSS HHHEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCHHHCHHHHHHCC DYYPAIRQPNVDVVTTPIRTIVHDGIVTADGAHHAVDAVICGTGFQVNDVGAPFDVAGIG CCCCCCCCCCCCEEECCHHHHHHCCEEECCCCCHHEEEEEECCCEEECCCCCCEEECCCC GADLGALWLRDGPEAYLGTSIADFPNFFMLAGPNTGLGHNSMIYMIESQVQYIADCLREL CCCCCEEEECCCCCHHHCCCHHHCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHH RRRGARTMNLRADVQRAFNERLQLDMRQTVWASGCHSWYQTKSGKVTAIWPGFTFSFRRR HHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHH TRRVRSGEYTYSR HHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]