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The map label for this gene is alkN [H]

Identifier: 186476034

GI number: 186476034

Start: 1430631

End: 1432043

Strand: Direct

Name: alkN [H]

Synonym: Bphy_1275

Alternate gene names: 186476034

Gene position: 1430631-1432043 (Clockwise)

Preceding gene: 186476032

Following gene: 186476039

Centisome position: 41.12

GC content: 62.85

Gene sequence:

>1413_bases
ATGACGGGCTTCTTCAATCGCCGCTCACGCCGCAACGTCGGCGCTTCTTCCATAGTCGGCGAAATCGCCGCGCAAGCGGG
CAAGCTCGGCATCGAAATCTGCGACGTGTCCGGTCATATCGAAGAAGTTGCCGCGCGGGTCAAACGGCAGGCCGACGTGT
GCCAAACGCTGCGTCAGTCGGCGGCGGCCACCCTCGCAGGCAACCATCGCATCGCCGCGGCGGCCCGCGAAATGAGCGCC
GTGACGGCGCAAGCCGCGGGCGATGTCGGAAGCTCGCAGCAAACACTTGATGGATCGCTGTCCGATATTCATGGGTTGGT
CGAAGGCGTGACCGTGATCGAAAGTCAGATCGGCGCGTTGCGCGCCGCGCTCTCGCACGTGAGCCGCGTGTCGGAGGAAA
TTTCGCTGATCGCGCGGCAGACACACTTGCTCGCGCTGAACGCAGCGATCGAAGCCGCACGTGCCGGCGATTTCGGCAAG
AGCTTCGCTGTCGTCGCAGCCGAGGTGAAGACGTTGTCCGCCAAGACGGCGCAGGCAACGGGCCAGATTGAAACGACGCT
CGCCCAACTCACCGAACAGACAGAACGGCTGATCGCCGAGGGCGCCGAAAACACGGCACGCGCCCAACGTGTGCGTGAAG
GCACGCGCAGGATCGGCGATGTCGTGCATTCGACCGGTCACGCGATCATGCAGTTGAATGCAGAGGCGAACCAGATCGCC
ACGCTGTCGGGTGAAATCGAAGAGCAATGCAATGCATTCGAATCGCAGGTGCTGGAAATTGCGACGGACGTCGAGCATTC
TGGTGAAAATTTCGTGCAGGCGAAGAATCAGCTCGGCAGCCTGCTCGGCGTATCGGAAAATCTGATCGAACTGACGGCGG
GCACGGGCGTCGCCACGGCAGACACGCGCTTCATCGACGCCGTCGAACAGGCGGCAGCGAAGGCCGGCAAACTGTTCGAG
GCGGCGATCGCGCGCGGCGAATTCACGATGAACGACCTGTTCGACGATCGCTACGTGCCCGTGCCCCGCACGAACCCGCA
GCAATTCGTTACGCGCTTCACCGAGTTGACCGACAGGATCCTGCCGCTCATCCAGGAGCCGATGCTCGAACTCGATCCTC
GCGTCGCATTCTGTGCGGCCGTCGACGTGCGCGGCTACCTGCCGACTCACAACCTCAAGTTCTCGCAGCCGCAGCGCGAC
GATCCCGTCTGGAACGCCGCGAACTGCCGCAACCGACGGATCTTCAACGACAGGACGGGTCTCGCGGCGGGTACCAATAC
GAAGCGCTTTCTGCTGCAGACGTACCGGCGCGATATGGGCGGCGGCGAATATGCACTGATGAAGGATGCATCTGCGCCGA
TCGTCGTGAACGGCCGGCATTGGGGCGGCCTGCGCATCGGTTATCGGATCTAA

Upstream 100 bases:

>100_bases
GCGATCGACCAACCGATAGCCTGCAACATGCACTGACACGCACCTCAGACAGACATCGAGACAGCGCTCGACCGCGCCGC
ACCGCTCAGGAGAGTTGATC

Downstream 100 bases:

>100_bases
GCCTGCACGCCCGATTATCTTGATGAAAAAAGCCGGCGTCCTGGCGGGCGCCAGCCATCTGCATTGAATTTCTCGTCGCA
GCTTGAACTAGATTGCCATT

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 470; Mature: 469

Protein sequence:

>470_residues
MTGFFNRRSRRNVGASSIVGEIAAQAGKLGIEICDVSGHIEEVAARVKRQADVCQTLRQSAAATLAGNHRIAAAAREMSA
VTAQAAGDVGSSQQTLDGSLSDIHGLVEGVTVIESQIGALRAALSHVSRVSEEISLIARQTHLLALNAAIEAARAGDFGK
SFAVVAAEVKTLSAKTAQATGQIETTLAQLTEQTERLIAEGAENTARAQRVREGTRRIGDVVHSTGHAIMQLNAEANQIA
TLSGEIEEQCNAFESQVLEIATDVEHSGENFVQAKNQLGSLLGVSENLIELTAGTGVATADTRFIDAVEQAAAKAGKLFE
AAIARGEFTMNDLFDDRYVPVPRTNPQQFVTRFTELTDRILPLIQEPMLELDPRVAFCAAVDVRGYLPTHNLKFSQPQRD
DPVWNAANCRNRRIFNDRTGLAAGTNTKRFLLQTYRRDMGGGEYALMKDASAPIVVNGRHWGGLRIGYRI

Sequences:

>Translated_470_residues
MTGFFNRRSRRNVGASSIVGEIAAQAGKLGIEICDVSGHIEEVAARVKRQADVCQTLRQSAAATLAGNHRIAAAAREMSA
VTAQAAGDVGSSQQTLDGSLSDIHGLVEGVTVIESQIGALRAALSHVSRVSEEISLIARQTHLLALNAAIEAARAGDFGK
SFAVVAAEVKTLSAKTAQATGQIETTLAQLTEQTERLIAEGAENTARAQRVREGTRRIGDVVHSTGHAIMQLNAEANQIA
TLSGEIEEQCNAFESQVLEIATDVEHSGENFVQAKNQLGSLLGVSENLIELTAGTGVATADTRFIDAVEQAAAKAGKLFE
AAIARGEFTMNDLFDDRYVPVPRTNPQQFVTRFTELTDRILPLIQEPMLELDPRVAFCAAVDVRGYLPTHNLKFSQPQRD
DPVWNAANCRNRRIFNDRTGLAAGTNTKRFLLQTYRRDMGGGEYALMKDASAPIVVNGRHWGGLRIGYRI
>Mature_469_residues
TGFFNRRSRRNVGASSIVGEIAAQAGKLGIEICDVSGHIEEVAARVKRQADVCQTLRQSAAATLAGNHRIAAAAREMSAV
TAQAAGDVGSSQQTLDGSLSDIHGLVEGVTVIESQIGALRAALSHVSRVSEEISLIARQTHLLALNAAIEAARAGDFGKS
FAVVAAEVKTLSAKTAQATGQIETTLAQLTEQTERLIAEGAENTARAQRVREGTRRIGDVVHSTGHAIMQLNAEANQIAT
LSGEIEEQCNAFESQVLEIATDVEHSGENFVQAKNQLGSLLGVSENLIELTAGTGVATADTRFIDAVEQAAAKAGKLFEA
AIARGEFTMNDLFDDRYVPVPRTNPQQFVTRFTELTDRILPLIQEPMLELDPRVAFCAAVDVRGYLPTHNLKFSQPQRDD
PVWNAANCRNRRIFNDRTGLAAGTNTKRFLLQTYRRDMGGGEYALMKDASAPIVVNGRHWGGLRIGYRI

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=205, Percent_Identity=33.1707317073171, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1789453, Length=198, Percent_Identity=30.3030303030303, Blast_Score=63, Evalue=4e-11,
Organism=Escherichia coli, GI1788195, Length=164, Percent_Identity=33.5365853658537, Blast_Score=62, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 50586; Mature: 50454

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGFFNRRSRRNVGASSIVGEIAAQAGKLGIEICDVSGHIEEVAARVKRQADVCQTLRQS
CCCCCCCCHHCCCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
AAATLAGNHRIAAAAREMSAVTAQAAGDVGSSQQTLDGSLSDIHGLVEGVTVIESQIGAL
HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHH
RAALSHVSRVSEEISLIARQTHLLALNAAIEAARAGDFGKSFAVVAAEVKTLSAKTAQAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC
GQIETTLAQLTEQTERLIAEGAENTARAQRVREGTRRIGDVVHSTGHAIMQLNAEANQIA
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEE
TLSGEIEEQCNAFESQVLEIATDVEHSGENFVQAKNQLGSLLGVSENLIELTAGTGVATA
ECCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHEEECCCCCCCC
DTRFIDAVEQAAAKAGKLFEAAIARGEFTMNDLFDDRYVPVPRTNPQQFVTRFTELTDRI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
LPLIQEPMLELDPRVAFCAAVDVRGYLPTHNLKFSQPQRDDPVWNAANCRNRRIFNDRTG
HHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCC
LAAGTNTKRFLLQTYRRDMGGGEYALMKDASAPIVVNGRHWGGLRIGYRI
CCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCCEEECEEC
>Mature Secondary Structure 
TGFFNRRSRRNVGASSIVGEIAAQAGKLGIEICDVSGHIEEVAARVKRQADVCQTLRQS
CCCCCCCHHCCCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
AAATLAGNHRIAAAAREMSAVTAQAAGDVGSSQQTLDGSLSDIHGLVEGVTVIESQIGAL
HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHH
RAALSHVSRVSEEISLIARQTHLLALNAAIEAARAGDFGKSFAVVAAEVKTLSAKTAQAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC
GQIETTLAQLTEQTERLIAEGAENTARAQRVREGTRRIGDVVHSTGHAIMQLNAEANQIA
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEE
TLSGEIEEQCNAFESQVLEIATDVEHSGENFVQAKNQLGSLLGVSENLIELTAGTGVATA
ECCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHEEECCCCCCCC
DTRFIDAVEQAAAKAGKLFEAAIARGEFTMNDLFDDRYVPVPRTNPQQFVTRFTELTDRI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
LPLIQEPMLELDPRVAFCAAVDVRGYLPTHNLKFSQPQRDDPVWNAANCRNRRIFNDRTG
HHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCC
LAAGTNTKRFLLQTYRRDMGGGEYALMKDASAPIVVNGRHWGGLRIGYRI
CCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCCCEEECEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11390693 [H]